RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 RGS12O14924 1447 aa37.26■■■■□ 3.55
TMEM54-205ENST00000475208 RBM6P78332 1123 aaKnown RBP37.25■■■■□ 3.55
TMEM54-205ENST00000475208 NGLY1Q96IV0 654 aa37.25■■■■□ 3.55
TMEM54-205ENST00000475208 IFT172Q9UG01 1749 aa37.24■■■■□ 3.55
TMEM54-205ENST00000475208 MPHOSPH9Q99550 1183 aa37.23■■■■□ 3.55
TMEM54-205ENST00000475208 ANKRD30BQ9BXX2 1392 aa37.22■■■■□ 3.55
TMEM54-205ENST00000475208 TECPR2O15040 1411 aa37.2■■■■□ 3.55
TMEM54-205ENST00000475208 STK26Q9P289 416 aa37.2■■■■□ 3.55
TMEM54-205ENST00000475208 COL22A1Q8NFW1 1626 aaPredicted RBP37.19■■■■□ 3.54
TMEM54-205ENST00000475208 ESCO1Q5FWF5 840 aa37.19■■■■□ 3.54
TMEM54-205ENST00000475208 LRPPRCP42704 1394 aaKnown RBP37.18■■■■□ 3.54
TMEM54-205ENST00000475208 NPHP3Q7Z494 1330 aa37.18■■■■□ 3.54
TMEM54-205ENST00000475208 WAPLQ7Z5K2 1190 aa37.16■■■■□ 3.54
TMEM54-205ENST00000475208 PXDNQ92626 1479 aa37.14■■■■□ 3.54
TMEM54-205ENST00000475208 KNDC1Q76NI1 1749 aa37.14■■■■□ 3.54
TMEM54-205ENST00000475208 PIK3C2GO75747 1445 aa37.14■■■■□ 3.54
TMEM54-205ENST00000475208 USP21Q9UK80 565 aa37.13■■■■□ 3.53
TMEM54-205ENST00000475208 ABCC11Q96J66 1382 aa37.13■■■■□ 3.53
TMEM54-205ENST00000475208 TMEM132EQ6IEE7 984 aa37.12■■■■□ 3.53
TMEM54-205ENST00000475208 MYOM2P54296 1465 aa37.12■■■■□ 3.53
TMEM54-205ENST00000475208 PLEKHH1Q9ULM0 1364 aa37.11■■■■□ 3.53
TMEM54-205ENST00000475208 NUTM2FA1L443 756 aa37.09■■■■□ 3.53
TMEM54-205ENST00000475208 FOXO3O43524 673 aa37.09■■■■□ 3.53
TMEM54-205ENST00000475208 XPCQ01831 940 aaPredicted RBP37.09■■■■□ 3.53
TMEM54-205ENST00000475208 FNBP4Q8N3X1 1017 aaPredicted RBP37.09■■■■□ 3.53
TMEM54-205ENST00000475208 TRPC5Q9UL62 973 aaPredicted RBP37.08■■■■□ 3.53
TMEM54-205ENST00000475208 YTHDC2Q9H6S0 1430 aaKnown RBP37.06■■■■□ 3.52
TMEM54-205ENST00000475208 ATRNO75882 1429 aa37.04■■■■□ 3.52
TMEM54-205ENST00000475208 FMN2Q9NZ56 1722 aa37.04■■■■□ 3.52
TMEM54-205ENST00000475208 MARF1Q9Y4F3 1742 aaKnown RBP36.99■■■■□ 3.51
TMEM54-205ENST00000475208 ATAD2Q6PL18 1390 aa36.98■■■■□ 3.51
TMEM54-205ENST00000475208 KIF1AQ12756 1690 aa36.98■■■■□ 3.51
TMEM54-205ENST00000475208 ACIN1Q9UKV3 1341 aaKnown RBP36.97■■■■□ 3.51
TMEM54-205ENST00000475208 NRXN1Q9ULB1 1477 aa36.96■■■■□ 3.51
TMEM54-205ENST00000475208 C14orf93Q9H972 538 aaKnown RBP36.96■■■■□ 3.51
TMEM54-205ENST00000475208 BCL9LQ86UU0 1499 aa36.95■■■■□ 3.51
TMEM54-205ENST00000475208 SIRT1Q96EB6 747 aa36.94■■■■□ 3.5
TMEM54-205ENST00000475208 SPATA31A3Q5VYP0 1347 aa36.91■■■■□ 3.5
TMEM54-205ENST00000475208 CFAP70Q5T0N1 1121 aa36.91■■■■□ 3.5
TMEM54-205ENST00000475208 DHX57Q6P158 1386 aaKnown RBP36.91■■■■□ 3.5
TMEM54-205ENST00000475208 KRT28Q7Z3Y7 464 aa36.86■■■■□ 3.49
TMEM54-205ENST00000475208 RGPD8O14715 1765 aaPredicted RBP36.85■■■■□ 3.49
TMEM54-205ENST00000475208 RAB3GAP2Q9H2M9 1393 aa36.84■■■■□ 3.49
TMEM54-205ENST00000475208 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.84■■■■□ 3.49
TMEM54-205ENST00000475208 GJD4Q96KN9 370 aaPredicted RBP36.83■■■■□ 3.49
TMEM54-205ENST00000475208 PRAM1Q96QH2 718 aa36.83■■■■□ 3.49
TMEM54-205ENST00000475208 PHF8Q9UPP1 1060 aa36.83■■■■□ 3.49
TMEM54-205ENST00000475208 SAFB2Q14151 953 aaKnown RBP eCLIP36.82■■■■□ 3.48
TMEM54-205ENST00000475208 USP32Q8NFA0 1604 aa36.81■■■■□ 3.48
TMEM54-205ENST00000475208 SLIT2O94813 1529 aa36.81■■■■□ 3.48
TMEM54-205ENST00000475208 TNS3Q68CZ2 1445 aa36.81■■■■□ 3.48
TMEM54-205ENST00000475208 DLC1Q96QB1 1528 aa36.79■■■■□ 3.48
TMEM54-205ENST00000475208 UNC5CLQ8IV45 518 aa36.78■■■■□ 3.48
TMEM54-205ENST00000475208 PSME1Q06323 249 aa36.77■■■■□ 3.48
TMEM54-205ENST00000475208 EP400Q96L91 3159 aa36.76■■■■□ 3.47
TMEM54-205ENST00000475208 POGKQ9P215 609 aa36.75■■■■□ 3.47
TMEM54-205ENST00000475208 RALGAPBQ86X10 1494 aa36.75■■■■□ 3.47
TMEM54-205ENST00000475208 GLI3P10071 1580 aa36.74■■■■□ 3.47
TMEM54-205ENST00000475208 HAP1P54257 671 aaPredicted RBP36.74■■■■□ 3.47
TMEM54-205ENST00000475208 ADGRB1O14514 1584 aa36.74■■■■□ 3.47
TMEM54-205ENST00000475208 SBNO1A3KN83 1393 aa36.73■■■■□ 3.47
TMEM54-205ENST00000475208 ADGRB2O60241 1585 aa36.72■■■■□ 3.47
TMEM54-205ENST00000475208 ANKARQ7Z5J8 1434 aa36.71■■■■□ 3.47
TMEM54-205ENST00000475208 CABLES1Q8TDN4 633 aa36.71■■■■□ 3.47
TMEM54-205ENST00000475208 PLEKHG5O94827 1062 aa36.7■■■■□ 3.47
TMEM54-205ENST00000475208 ABCA3Q99758 1704 aa36.68■■■■□ 3.46
TMEM54-205ENST00000475208 ARHGEF10O15013 1369 aa36.68■■■■□ 3.46
TMEM54-205ENST00000475208 LMOD2Q6P5Q4 547 aa36.68■■■■□ 3.46
TMEM54-205ENST00000475208 PMFBP1Q8TBY8 1022 aa36.67■■■■□ 3.46
TMEM54-205ENST00000475208 CCDC125Q86Z20 511 aa36.66■■■■□ 3.46
TMEM54-205ENST00000475208 TRAK1Q9UPV9 953 aa36.66■■■■□ 3.46
TMEM54-205ENST00000475208 PLCH1Q4KWH8 1693 aa36.65■■■■□ 3.46
TMEM54-205ENST00000475208 HIRIP3Q9BW71 556 aaPredicted RBP36.63■■■■□ 3.45
TMEM54-205ENST00000475208 KDM2AQ9Y2K7 1162 aa36.62■■■■□ 3.45
TMEM54-205ENST00000475208 NWD2Q9ULI1 1742 aa36.62■■■■□ 3.45
TMEM54-205ENST00000475208 VPS72Q15906 364 aa36.6■■■■□ 3.45
TMEM54-205ENST00000475208 DCAF11Q8TEB1 546 aa36.6■■■■□ 3.45
TMEM54-205ENST00000475208 MINK1Q8N4C8 1332 aaPredicted RBP36.59■■■■□ 3.45
TMEM54-205ENST00000475208 ZRANB1Q9UGI0 708 aa36.59■■■■□ 3.45
TMEM54-205ENST00000475208 EIF3AQ14152 1382 aaKnown RBP36.58■■■■□ 3.45
TMEM54-205ENST00000475208 TRPM3Q9HCF6 1732 aaPredicted RBP36.58■■■■□ 3.45
TMEM54-205ENST00000475208 BRWD3Q6RI45 1802 aa36.57■■■■□ 3.45
TMEM54-205ENST00000475208 TULP4Q9NRJ4 1543 aa36.57■■■■□ 3.44
TMEM54-205ENST00000475208 SRCAPQ6ZRS2 3230 aa36.56■■■■□ 3.44
TMEM54-205ENST00000475208 SEPT12Q8IYM1 358 aa36.56■■■■□ 3.44
TMEM54-205ENST00000475208 PRR36Q9H6K5 1346 aa36.56■■■■□ 3.44
TMEM54-205ENST00000475208 BLMP54132 1417 aaPredicted RBP36.55■■■■□ 3.44
TMEM54-205ENST00000475208 CCDC9Q9Y3X0 531 aaKnown RBP36.55■■■■□ 3.44
TMEM54-205ENST00000475208 GPRASP1Q5JY77 1395 aa36.53■■■■□ 3.44
TMEM54-205ENST00000475208 FAM83GA6ND36 823 aa36.52■■■■□ 3.44
TMEM54-205ENST00000475208 ALS2Q96Q42 1657 aa36.51■■■■□ 3.44
TMEM54-205ENST00000475208 WASLO00401 505 aaPredicted RBP36.51■■■■□ 3.44
TMEM54-205ENST00000475208 STAC3Q96MF2 364 aa36.51■■■■□ 3.44
TMEM54-205ENST00000475208 NRAPQ86VF7 1730 aa36.48■■■■□ 3.43
TMEM54-205ENST00000475208 ONECUT3O60422 494 aaPredicted RBP36.47■■■■□ 3.43
TMEM54-205ENST00000475208 ARHGEF28Q8N1W1 1705 aaKnown RBP36.45■■■■□ 3.43
TMEM54-205ENST00000475208 HRCP23327 699 aa36.44■■■■□ 3.42
TMEM54-205ENST00000475208 NGDNQ8NEJ9 315 aaKnown RBP36.43■■■■□ 3.42
TMEM54-205ENST00000475208 COL14A1Q05707 1796 aaKnown RBP36.43■■■■□ 3.42
TMEM54-205ENST00000475208 KRT27Q7Z3Y8 459 aa36.42■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms