RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 SEC24BO95487 1268 aa16.56■□□□□ 0.24
CHRNA4-204ENST00000475033 UHRF1BP1LA0JNW5 1464 aa16.56■□□□□ 0.24
CHRNA4-204ENST00000475033 IDI1Q13907 227 aa16.56■□□□□ 0.24
CHRNA4-204ENST00000475033 FTSJ3Q8IY81 847 aaKnown RBP16.56■□□□□ 0.24
CHRNA4-204ENST00000475033 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
CHRNA4-204ENST00000475033 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
CHRNA4-204ENST00000475033 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
CHRNA4-204ENST00000475033 TRPM1Q7Z4N2 1603 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 PLEKHH1Q9ULM0 1364 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 IQGAP3Q86VI3 1631 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 UNC13BO14795 1591 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 PLXNC1O60486 1568 aa16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 TRIM44Q96DX7 344 aaPredicted RBP16.54■□□□□ 0.24
CHRNA4-204ENST00000475033 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
CHRNA4-204ENST00000475033 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
CHRNA4-204ENST00000475033 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
CHRNA4-204ENST00000475033 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
CHRNA4-204ENST00000475033 ZNF518AQ6AHZ1 1483 aa16.52■□□□□ 0.24
CHRNA4-204ENST00000475033 CLCN1P35523 988 aa16.52■□□□□ 0.24
CHRNA4-204ENST00000475033 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
CHRNA4-204ENST00000475033 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.23
CHRNA4-204ENST00000475033 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
CHRNA4-204ENST00000475033 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
CHRNA4-204ENST00000475033 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CHRNA4-204ENST00000475033 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
CHRNA4-204ENST00000475033 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
CHRNA4-204ENST00000475033 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
CHRNA4-204ENST00000475033 POLR1AO95602 1720 aaPredicted RBP16.49■□□□□ 0.23
CHRNA4-204ENST00000475033 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
CHRNA4-204ENST00000475033 IGHDP01880 384 aa16.48■□□□□ 0.23
CHRNA4-204ENST00000475033 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
CHRNA4-204ENST00000475033 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 TRAK2O60296 914 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 MCM4P33991 863 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 ARID3AQ99856 593 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 TRPM2O94759 1503 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 USP19O94966 1318 aa16.46■□□□□ 0.23
CHRNA4-204ENST00000475033 ESPNB1AK53 854 aa16.46■□□□□ 0.22
CHRNA4-204ENST00000475033 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
CHRNA4-204ENST00000475033 PTPRTO14522 1441 aa16.45■□□□□ 0.22
CHRNA4-204ENST00000475033 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
CHRNA4-204ENST00000475033 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 NPATQ14207 1427 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 CLTCL1P53675 1640 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 MRE11P49959 708 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 E9PCH4 1651 aa16.43■□□□□ 0.22
CHRNA4-204ENST00000475033 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
CHRNA4-204ENST00000475033 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
CHRNA4-204ENST00000475033 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
CHRNA4-204ENST00000475033 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
CHRNA4-204ENST00000475033 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
CHRNA4-204ENST00000475033 GRPEL1Q9HAV7 217 aa16.41■□□□□ 0.22
CHRNA4-204ENST00000475033 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
CHRNA4-204ENST00000475033 HMOX1P09601 288 aa16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 FBLN1P23142 703 aa16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 RIPK4P57078 832 aa16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 DIAPH1O60610 1272 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-204ENST00000475033 NGEFQ8N5V2 710 aa16.39■□□□□ 0.21
CHRNA4-204ENST00000475033 ANTXR1Q9H6X2 564 aa16.39■□□□□ 0.21
CHRNA4-204ENST00000475033 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
CHRNA4-204ENST00000475033 POGZQ7Z3K3 1410 aa16.39■□□□□ 0.21
CHRNA4-204ENST00000475033 FSD2A1L4K1 749 aa16.38■□□□□ 0.21
CHRNA4-204ENST00000475033 TPRNQ4KMQ1 711 aa16.38■□□□□ 0.21
CHRNA4-204ENST00000475033 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
CHRNA4-204ENST00000475033 ERVK-7P63135 1459 aa16.38■□□□□ 0.21
CHRNA4-204ENST00000475033 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
CHRNA4-204ENST00000475033 CHMP5Q9NZZ3 219 aa16.37■□□□□ 0.21
CHRNA4-204ENST00000475033 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
CHRNA4-204ENST00000475033 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 ZMYM4Q5VZL5 1548 aa16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 KIAA1211Q6ZU35 1233 aa16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 TET3O43151 1660 aa16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 SPHKAPQ2M3C7 1700 aa16.36■□□□□ 0.21
CHRNA4-204ENST00000475033 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
CHRNA4-204ENST00000475033 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
CHRNA4-204ENST00000475033 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
CHRNA4-204ENST00000475033 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
CHRNA4-204ENST00000475033 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
CHRNA4-204ENST00000475033 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
CHRNA4-204ENST00000475033 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.21
CHRNA4-204ENST00000475033 HSCBQ8IWL3 235 aa16.33■□□□□ 0.21
CHRNA4-204ENST00000475033 ARAP3Q8WWN8 1544 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 TPM2P07951 284 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
CHRNA4-204ENST00000475033 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
CHRNA4-204ENST00000475033 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
CHRNA4-204ENST00000475033 APBB1O00213 710 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms