RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 DCAF11Q8TEB1 546 aa19.14■□□□□ 0.65
RTN1-205ENST00000474911 CFAP70Q5T0N1 1121 aa19.13■□□□□ 0.65
RTN1-205ENST00000474911 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
RTN1-205ENST00000474911 NHSL1Q5SYE7 1610 aa19.12■□□□□ 0.65
RTN1-205ENST00000474911 SIRT1Q96EB6 747 aa19.12■□□□□ 0.65
RTN1-205ENST00000474911 STK26Q9P289 416 aa19.11■□□□□ 0.65
RTN1-205ENST00000474911 C1orf167Q5SNV9 1468 aa19.1■□□□□ 0.65
RTN1-205ENST00000474911 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
RTN1-205ENST00000474911 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
RTN1-205ENST00000474911 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
RTN1-205ENST00000474911 JCADQ9P266 1359 aa19.09■□□□□ 0.65
RTN1-205ENST00000474911 DLC1Q96QB1 1528 aa19.09■□□□□ 0.65
RTN1-205ENST00000474911 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
RTN1-205ENST00000474911 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
RTN1-205ENST00000474911 PLEKHH1Q9ULM0 1364 aa19.07■□□□□ 0.64
RTN1-205ENST00000474911 RALGAPBQ86X10 1494 aa19.06■□□□□ 0.64
RTN1-205ENST00000474911 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
RTN1-205ENST00000474911 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
RTN1-205ENST00000474911 ILDR2Q71H61 639 aa19.04■□□□□ 0.64
RTN1-205ENST00000474911 FMN2Q9NZ56 1722 aa19.04■□□□□ 0.64
RTN1-205ENST00000474911 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
RTN1-205ENST00000474911 PRAM1Q96QH2 718 aa19■□□□□ 0.63
RTN1-205ENST00000474911 ORAI2Q96SN7 254 aa19■□□□□ 0.63
RTN1-205ENST00000474911 ADGRB2O60241 1585 aa19■□□□□ 0.63
RTN1-205ENST00000474911 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
RTN1-205ENST00000474911 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
RTN1-205ENST00000474911 ARHGEF28Q8N1W1 1705 aaKnown RBP18.98■□□□□ 0.63
RTN1-205ENST00000474911 SOS2Q07890 1332 aaPredicted RBP18.98■□□□□ 0.63
RTN1-205ENST00000474911 ROCK2O75116 1388 aaKnown RBP18.97■□□□□ 0.63
RTN1-205ENST00000474911 DDX17Q92841 729 aaKnown RBP18.97■□□□□ 0.63
RTN1-205ENST00000474911 POGKQ9P215 609 aa18.97■□□□□ 0.63
RTN1-205ENST00000474911 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
RTN1-205ENST00000474911 KIF1AQ12756 1690 aa18.97■□□□□ 0.63
RTN1-205ENST00000474911 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
RTN1-205ENST00000474911 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
RTN1-205ENST00000474911 GPRASP1Q5JY77 1395 aa18.96■□□□□ 0.63
RTN1-205ENST00000474911 LRP6O75581 1613 aa18.95■□□□□ 0.62
RTN1-205ENST00000474911 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
RTN1-205ENST00000474911 RGS17Q9UGC6 210 aaPredicted RBP18.94■□□□□ 0.62
RTN1-205ENST00000474911 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
RTN1-205ENST00000474911 SAFB2Q14151 953 aaKnown RBP eCLIP18.93■□□□□ 0.62
RTN1-205ENST00000474911 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
RTN1-205ENST00000474911 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
RTN1-205ENST00000474911 ADRA2BP18089 450 aa18.92■□□□□ 0.62
RTN1-205ENST00000474911 PXDNQ92626 1479 aa18.92■□□□□ 0.62
RTN1-205ENST00000474911 ANKARQ7Z5J8 1434 aa18.92■□□□□ 0.62
RTN1-205ENST00000474911 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
RTN1-205ENST00000474911 USP47Q96K76 1375 aa18.91■□□□□ 0.62
RTN1-205ENST00000474911 HSPA5P11021 654 aaKnown RBP18.91■□□□□ 0.62
RTN1-205ENST00000474911 USP32Q8NFA0 1604 aa18.91■□□□□ 0.62
RTN1-205ENST00000474911 COL22A1Q8NFW1 1626 aaPredicted RBP18.91■□□□□ 0.62
RTN1-205ENST00000474911 NBPF1Q3BBV0 1214 aa18.9■□□□□ 0.62
RTN1-205ENST00000474911 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
RTN1-205ENST00000474911 SOCS7O14512 581 aa18.89■□□□□ 0.61
RTN1-205ENST00000474911 FOXO3O43524 673 aa18.89■□□□□ 0.61
RTN1-205ENST00000474911 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
RTN1-205ENST00000474911 TULP4Q9NRJ4 1543 aa18.87■□□□□ 0.61
RTN1-205ENST00000474911 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
RTN1-205ENST00000474911 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
RTN1-205ENST00000474911 MSH5O43196 834 aa18.86■□□□□ 0.61
RTN1-205ENST00000474911 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
RTN1-205ENST00000474911 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
RTN1-205ENST00000474911 HIRIP3Q9BW71 556 aaPredicted RBP18.85■□□□□ 0.61
RTN1-205ENST00000474911 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
RTN1-205ENST00000474911 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
RTN1-205ENST00000474911 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
RTN1-205ENST00000474911 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
RTN1-205ENST00000474911 POTEAQ6S8J7 498 aa18.83■□□□□ 0.6
RTN1-205ENST00000474911 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
RTN1-205ENST00000474911 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
RTN1-205ENST00000474911 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
RTN1-205ENST00000474911 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
RTN1-205ENST00000474911 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
RTN1-205ENST00000474911 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
RTN1-205ENST00000474911 ATP7BP35670 1465 aa18.8■□□□□ 0.6
RTN1-205ENST00000474911 MARF1Q9Y4F3 1742 aaKnown RBP18.8■□□□□ 0.6
RTN1-205ENST00000474911 PSME1Q06323 249 aa18.8■□□□□ 0.6
RTN1-205ENST00000474911 SBNO1A3KN83 1393 aa18.79■□□□□ 0.6
RTN1-205ENST00000474911 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
RTN1-205ENST00000474911 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
RTN1-205ENST00000474911 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
RTN1-205ENST00000474911 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
RTN1-205ENST00000474911 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
RTN1-205ENST00000474911 PMFBP1Q8TBY8 1022 aa18.77■□□□□ 0.6
RTN1-205ENST00000474911 CDK19Q9BWU1 502 aa18.77■□□□□ 0.6
RTN1-205ENST00000474911 AFF2P51816 1311 aa18.76■□□□□ 0.59
RTN1-205ENST00000474911 NUDT16Q96DE0 195 aaKnown RBP18.75■□□□□ 0.59
RTN1-205ENST00000474911 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
RTN1-205ENST00000474911 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
RTN1-205ENST00000474911 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
RTN1-205ENST00000474911 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
RTN1-205ENST00000474911 NGLY1Q96IV0 654 aa18.73■□□□□ 0.59
RTN1-205ENST00000474911 CCDC61Q9Y6R9 512 aa18.73■□□□□ 0.59
RTN1-205ENST00000474911 ABCA3Q99758 1704 aa18.72■□□□□ 0.59
RTN1-205ENST00000474911 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
RTN1-205ENST00000474911 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
RTN1-205ENST00000474911 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
RTN1-205ENST00000474911 CCDC7Q96M83 1385 aa18.7■□□□□ 0.58
RTN1-205ENST00000474911 CDK12Q9NYV4 1490 aaPredicted RBP18.69■□□□□ 0.58
RTN1-205ENST00000474911 WASHC2AQ641Q2 1341 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms