RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 TMEM132EQ6IEE7 984 aa23.81■■□□□ 1.4
ITGB5-205ENST00000474838 DDX17Q92841 729 aaKnown RBP23.8■■□□□ 1.4
ITGB5-205ENST00000474838 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
ITGB5-205ENST00000474838 ORAI2Q96SN7 254 aa23.79■■□□□ 1.4
ITGB5-205ENST00000474838 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
ITGB5-205ENST00000474838 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
ITGB5-205ENST00000474838 WAPLQ7Z5K2 1190 aa23.77■■□□□ 1.4
ITGB5-205ENST00000474838 SOS2Q07890 1332 aaPredicted RBP23.76■■□□□ 1.39
ITGB5-205ENST00000474838 DHX57Q6P158 1386 aaKnown RBP23.75■■□□□ 1.39
ITGB5-205ENST00000474838 NUTM2BA6NNL0 878 aaPredicted RBP23.74■■□□□ 1.39
ITGB5-205ENST00000474838 NUTM2EB1AL46 878 aaPredicted RBP23.74■■□□□ 1.39
ITGB5-205ENST00000474838 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
ITGB5-205ENST00000474838 NUTM2AQ8IVF1 878 aaPredicted RBP23.74■■□□□ 1.39
ITGB5-205ENST00000474838 SIRT1Q96EB6 747 aa23.74■■□□□ 1.39
ITGB5-205ENST00000474838 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
ITGB5-205ENST00000474838 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
ITGB5-205ENST00000474838 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
ITGB5-205ENST00000474838 DLC1Q96QB1 1528 aa23.71■■□□□ 1.39
ITGB5-205ENST00000474838 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
ITGB5-205ENST00000474838 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
ITGB5-205ENST00000474838 PXDNQ92626 1479 aa23.68■■□□□ 1.38
ITGB5-205ENST00000474838 STAC3Q96MF2 364 aa23.68■■□□□ 1.38
ITGB5-205ENST00000474838 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
ITGB5-205ENST00000474838 COL22A1Q8NFW1 1626 aaPredicted RBP23.67■■□□□ 1.38
ITGB5-205ENST00000474838 DCAF11Q8TEB1 546 aa23.66■■□□□ 1.38
ITGB5-205ENST00000474838 AFF2P51816 1311 aa23.65■■□□□ 1.38
ITGB5-205ENST00000474838 NUTM2FA1L443 756 aa23.65■■□□□ 1.38
ITGB5-205ENST00000474838 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
ITGB5-205ENST00000474838 ADGRB2O60241 1585 aa23.64■■□□□ 1.37
ITGB5-205ENST00000474838 KDM2AQ9Y2K7 1162 aa23.63■■□□□ 1.37
ITGB5-205ENST00000474838 FOXO3O43524 673 aa23.62■■□□□ 1.37
ITGB5-205ENST00000474838 C8orf37Q96NL8 207 aa23.62■■□□□ 1.37
ITGB5-205ENST00000474838 POGKQ9P215 609 aa23.6■■□□□ 1.37
ITGB5-205ENST00000474838 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
ITGB5-205ENST00000474838 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
ITGB5-205ENST00000474838 CDK12Q9NYV4 1490 aaPredicted RBP23.59■■□□□ 1.37
ITGB5-205ENST00000474838 ADAMTS2O95450 1211 aa23.58■■□□□ 1.37
ITGB5-205ENST00000474838 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
ITGB5-205ENST00000474838 RXRBP28702 533 aa23.57■■□□□ 1.36
ITGB5-205ENST00000474838 TRAK1Q9UPV9 953 aa23.57■■□□□ 1.36
ITGB5-205ENST00000474838 NGLY1Q96IV0 654 aa23.55■■□□□ 1.36
ITGB5-205ENST00000474838 USP32Q8NFA0 1604 aa23.55■■□□□ 1.36
ITGB5-205ENST00000474838 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
ITGB5-205ENST00000474838 PHF8Q9UPP1 1060 aa23.54■■□□□ 1.36
ITGB5-205ENST00000474838 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
ITGB5-205ENST00000474838 ARHGEF28Q8N1W1 1705 aaKnown RBP23.53■■□□□ 1.36
ITGB5-205ENST00000474838 EIF3AQ14152 1382 aaKnown RBP23.52■■□□□ 1.36
ITGB5-205ENST00000474838 KIAA1210Q9ULL0 1709 aa23.52■■□□□ 1.36
ITGB5-205ENST00000474838 TULP4Q9NRJ4 1543 aa23.51■■□□□ 1.35
ITGB5-205ENST00000474838 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
ITGB5-205ENST00000474838 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
ITGB5-205ENST00000474838 KRT28Q7Z3Y7 464 aa23.5■■□□□ 1.35
ITGB5-205ENST00000474838 QTRT2Q9H974 415 aaKnown RBP23.5■■□□□ 1.35
ITGB5-205ENST00000474838 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
ITGB5-205ENST00000474838 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
ITGB5-205ENST00000474838 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
ITGB5-205ENST00000474838 MINK1Q8N4C8 1332 aaPredicted RBP23.49■■□□□ 1.35
ITGB5-205ENST00000474838 RGS12O14924 1447 aa23.48■■□□□ 1.35
ITGB5-205ENST00000474838 PSME1Q06323 249 aa23.47■■□□□ 1.35
ITGB5-205ENST00000474838 USP21Q9UK80 565 aa23.47■■□□□ 1.35
ITGB5-205ENST00000474838 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
ITGB5-205ENST00000474838 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
ITGB5-205ENST00000474838 ATRNO75882 1429 aa23.44■■□□□ 1.34
ITGB5-205ENST00000474838 PRR36Q9H6K5 1346 aa23.44■■□□□ 1.34
ITGB5-205ENST00000474838 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
ITGB5-205ENST00000474838 ARHGEF10O15013 1369 aa23.43■■□□□ 1.34
ITGB5-205ENST00000474838 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
ITGB5-205ENST00000474838 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
ITGB5-205ENST00000474838 ABCA3Q99758 1704 aa23.41■■□□□ 1.34
ITGB5-205ENST00000474838 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.41■■□□□ 1.34
ITGB5-205ENST00000474838 TRPM3Q9HCF6 1732 aaPredicted RBP23.41■■□□□ 1.34
ITGB5-205ENST00000474838 ATP7BP35670 1465 aa23.41■■□□□ 1.34
ITGB5-205ENST00000474838 ITSN1Q15811 1721 aa23.4■■□□□ 1.34
ITGB5-205ENST00000474838 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
ITGB5-205ENST00000474838 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
ITGB5-205ENST00000474838 SLIT2O94813 1529 aa23.38■■□□□ 1.33
ITGB5-205ENST00000474838 ALS2Q96Q42 1657 aa23.36■■□□□ 1.33
ITGB5-205ENST00000474838 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
ITGB5-205ENST00000474838 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
ITGB5-205ENST00000474838 LMOD2Q6P5Q4 547 aa23.36■■□□□ 1.33
ITGB5-205ENST00000474838 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
ITGB5-205ENST00000474838 CABLES1Q8TDN4 633 aa23.34■■□□□ 1.33
ITGB5-205ENST00000474838 L3MBTL2Q969R5 705 aa23.34■■□□□ 1.33
ITGB5-205ENST00000474838 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
ITGB5-205ENST00000474838 UNC5CLQ8IV45 518 aa23.32■■□□□ 1.32
ITGB5-205ENST00000474838 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
ITGB5-205ENST00000474838 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
ITGB5-205ENST00000474838 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
ITGB5-205ENST00000474838 CDK19Q9BWU1 502 aa23.31■■□□□ 1.32
ITGB5-205ENST00000474838 NWD2Q9ULI1 1742 aa23.3■■□□□ 1.32
ITGB5-205ENST00000474838 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
ITGB5-205ENST00000474838 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
ITGB5-205ENST00000474838 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
ITGB5-205ENST00000474838 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
ITGB5-205ENST00000474838 PLEKHG5O94827 1062 aa23.29■■□□□ 1.32
ITGB5-205ENST00000474838 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
ITGB5-205ENST00000474838 GLI3P10071 1580 aa23.28■■□□□ 1.32
ITGB5-205ENST00000474838 QRICH2Q9H0J4 1663 aa23.28■■□□□ 1.32
ITGB5-205ENST00000474838 CRYBG1Q9Y4K1 1723 aa23.28■■□□□ 1.32
ITGB5-205ENST00000474838 POLR3AO14802 1390 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms