RNA–Protein interactions for RNA: ENST00000474377.5

SSR2-208, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-208ENST00000474377 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
SSR2-208ENST00000474377 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
SSR2-208ENST00000474377 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
SSR2-208ENST00000474377 TECPR2O15040 1411 aa12.68□□□□□ -0.38
SSR2-208ENST00000474377 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
SSR2-208ENST00000474377 ROBO2Q9HCK4 1378 aa12.68□□□□□ -0.38
SSR2-208ENST00000474377 LAMC1P11047 1609 aa12.67□□□□□ -0.38
SSR2-208ENST00000474377 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
SSR2-208ENST00000474377 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
SSR2-208ENST00000474377 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
SSR2-208ENST00000474377 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
SSR2-208ENST00000474377 NRXN1Q9ULB1 1477 aa12.66□□□□□ -0.38
SSR2-208ENST00000474377 MST1RQ04912 1400 aa12.66□□□□□ -0.38
SSR2-208ENST00000474377 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
SSR2-208ENST00000474377 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
SSR2-208ENST00000474377 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
SSR2-208ENST00000474377 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
SSR2-208ENST00000474377 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
SSR2-208ENST00000474377 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
SSR2-208ENST00000474377 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
SSR2-208ENST00000474377 YTHDC2Q9H6S0 1430 aaKnown RBP12.63□□□□□ -0.39
SSR2-208ENST00000474377 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
SSR2-208ENST00000474377 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
SSR2-208ENST00000474377 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
SSR2-208ENST00000474377 CDC42BPGQ6DT37 1551 aa12.61□□□□□ -0.39
SSR2-208ENST00000474377 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
SSR2-208ENST00000474377 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSR2-208ENST00000474377 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
SSR2-208ENST00000474377 LRRC59Q96AG4 307 aaKnown RBP12.61□□□□□ -0.39
SSR2-208ENST00000474377 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
SSR2-208ENST00000474377 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
SSR2-208ENST00000474377 NUTM2FA1L443 756 aa12.59□□□□□ -0.39
SSR2-208ENST00000474377 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
SSR2-208ENST00000474377 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
SSR2-208ENST00000474377 POGKQ9P215 609 aa12.59□□□□□ -0.39
SSR2-208ENST00000474377 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
SSR2-208ENST00000474377 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
SSR2-208ENST00000474377 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
SSR2-208ENST00000474377 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
SSR2-208ENST00000474377 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
SSR2-208ENST00000474377 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.4
SSR2-208ENST00000474377 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
SSR2-208ENST00000474377 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
SSR2-208ENST00000474377 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
SSR2-208ENST00000474377 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
SSR2-208ENST00000474377 RXRBP28702 533 aa12.55□□□□□ -0.4
SSR2-208ENST00000474377 POTEAQ6S8J7 498 aa12.55□□□□□ -0.4
SSR2-208ENST00000474377 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
SSR2-208ENST00000474377 ADGRB1O14514 1584 aa12.55□□□□□ -0.4
SSR2-208ENST00000474377 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
SSR2-208ENST00000474377 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
SSR2-208ENST00000474377 ORAI2Q96SN7 254 aa12.54□□□□□ -0.4
SSR2-208ENST00000474377 FMN2Q9NZ56 1722 aa12.54□□□□□ -0.4
SSR2-208ENST00000474377 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
SSR2-208ENST00000474377 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
SSR2-208ENST00000474377 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
SSR2-208ENST00000474377 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
SSR2-208ENST00000474377 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
SSR2-208ENST00000474377 KIAA1210Q9ULL0 1709 aa12.53□□□□□ -0.4
SSR2-208ENST00000474377 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
SSR2-208ENST00000474377 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
SSR2-208ENST00000474377 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
SSR2-208ENST00000474377 L3MBTL2Q969R5 705 aa12.52□□□□□ -0.41
SSR2-208ENST00000474377 PNPLA6Q8IY17 1366 aa12.52□□□□□ -0.41
SSR2-208ENST00000474377 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
SSR2-208ENST00000474377 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
SSR2-208ENST00000474377 LRP6O75581 1613 aa12.51□□□□□ -0.41
SSR2-208ENST00000474377 FOXO3O43524 673 aa12.5□□□□□ -0.41
SSR2-208ENST00000474377 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
SSR2-208ENST00000474377 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
SSR2-208ENST00000474377 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
SSR2-208ENST00000474377 PSME1Q06323 249 aa12.49□□□□□ -0.41
SSR2-208ENST00000474377 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
SSR2-208ENST00000474377 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
SSR2-208ENST00000474377 NBPF1Q3BBV0 1214 aa12.48□□□□□ -0.41
SSR2-208ENST00000474377 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
SSR2-208ENST00000474377 AFF2P51816 1311 aa12.47□□□□□ -0.41
SSR2-208ENST00000474377 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
SSR2-208ENST00000474377 PXDNQ92626 1479 aa12.46□□□□□ -0.41
SSR2-208ENST00000474377 ATAD2Q6PL18 1390 aa12.46□□□□□ -0.41
SSR2-208ENST00000474377 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
SSR2-208ENST00000474377 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
SSR2-208ENST00000474377 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
SSR2-208ENST00000474377 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
SSR2-208ENST00000474377 PMFBP1Q8TBY8 1022 aa12.45□□□□□ -0.42
SSR2-208ENST00000474377 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
SSR2-208ENST00000474377 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
SSR2-208ENST00000474377 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
SSR2-208ENST00000474377 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
SSR2-208ENST00000474377 KRT28Q7Z3Y7 464 aa12.44□□□□□ -0.42
SSR2-208ENST00000474377 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
SSR2-208ENST00000474377 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
SSR2-208ENST00000474377 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSR2-208ENST00000474377 USP32Q8NFA0 1604 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 TNS3Q68CZ2 1445 aa12.43□□□□□ -0.42
SSR2-208ENST00000474377 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms