RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 MEX3CQ5U5Q3 659 aaKnown RBP23.27■■□□□ 1.32
CDPF1-205ENST00000474256 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
CDPF1-205ENST00000474256 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
CDPF1-205ENST00000474256 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
CDPF1-205ENST00000474256 CDC42BPGQ6DT37 1551 aa23.25■■□□□ 1.31
CDPF1-205ENST00000474256 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
CDPF1-205ENST00000474256 PNPLA6Q8IY17 1366 aa23.25■■□□□ 1.31
CDPF1-205ENST00000474256 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
CDPF1-205ENST00000474256 LAMC1P11047 1609 aa23.24■■□□□ 1.31
CDPF1-205ENST00000474256 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
CDPF1-205ENST00000474256 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
CDPF1-205ENST00000474256 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
CDPF1-205ENST00000474256 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
CDPF1-205ENST00000474256 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
CDPF1-205ENST00000474256 KNDC1Q76NI1 1749 aa23.21■■□□□ 1.31
CDPF1-205ENST00000474256 ESCO1Q5FWF5 840 aa23.2■■□□□ 1.3
CDPF1-205ENST00000474256 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
CDPF1-205ENST00000474256 STAC3Q96MF2 364 aa23.16■■□□□ 1.3
CDPF1-205ENST00000474256 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
CDPF1-205ENST00000474256 DCAF11Q8TEB1 546 aa23.15■■□□□ 1.3
CDPF1-205ENST00000474256 FOXO3O43524 673 aa23.14■■□□□ 1.29
CDPF1-205ENST00000474256 AFF2P51816 1311 aa23.13■■□□□ 1.29
CDPF1-205ENST00000474256 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
CDPF1-205ENST00000474256 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
CDPF1-205ENST00000474256 PXDNQ92626 1479 aa23.12■■□□□ 1.29
CDPF1-205ENST00000474256 ADGRB1O14514 1584 aa23.12■■□□□ 1.29
CDPF1-205ENST00000474256 C8orf37Q96NL8 207 aa23.11■■□□□ 1.29
CDPF1-205ENST00000474256 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
CDPF1-205ENST00000474256 RXRBP28702 533 aa23.09■■□□□ 1.29
CDPF1-205ENST00000474256 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
CDPF1-205ENST00000474256 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
CDPF1-205ENST00000474256 XPCQ01831 940 aaPredicted RBP23.08■■□□□ 1.29
CDPF1-205ENST00000474256 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDPF1-205ENST00000474256 POGKQ9P215 609 aa23.07■■□□□ 1.28
CDPF1-205ENST00000474256 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
CDPF1-205ENST00000474256 COL22A1Q8NFW1 1626 aaPredicted RBP23.05■■□□□ 1.28
CDPF1-205ENST00000474256 NGLY1Q96IV0 654 aa23.05■■□□□ 1.28
CDPF1-205ENST00000474256 QTRT2Q9H974 415 aaKnown RBP23.04■■□□□ 1.28
CDPF1-205ENST00000474256 PHF8Q9UPP1 1060 aa23.03■■□□□ 1.28
CDPF1-205ENST00000474256 CDK12Q9NYV4 1490 aaPredicted RBP23.03■■□□□ 1.28
CDPF1-205ENST00000474256 FNBP4Q8N3X1 1017 aaPredicted RBP23.02■■□□□ 1.28
CDPF1-205ENST00000474256 SPATA31A3Q5VYP0 1347 aa23.02■■□□□ 1.28
CDPF1-205ENST00000474256 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
CDPF1-205ENST00000474256 KRT28Q7Z3Y7 464 aa23.01■■□□□ 1.27
CDPF1-205ENST00000474256 RBM6P78332 1123 aaKnown RBP23■■□□□ 1.27
CDPF1-205ENST00000474256 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
CDPF1-205ENST00000474256 ADGRB2O60241 1585 aa22.99■■□□□ 1.27
CDPF1-205ENST00000474256 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
CDPF1-205ENST00000474256 USP21Q9UK80 565 aa22.98■■□□□ 1.27
CDPF1-205ENST00000474256 MINK1Q8N4C8 1332 aaPredicted RBP22.97■■□□□ 1.27
CDPF1-205ENST00000474256 PSME1Q06323 249 aa22.96■■□□□ 1.27
CDPF1-205ENST00000474256 WASLO00401 505 aaPredicted RBP22.95■■□□□ 1.26
CDPF1-205ENST00000474256 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
CDPF1-205ENST00000474256 TRPC5Q9UL62 973 aaPredicted RBP22.94■■□□□ 1.26
CDPF1-205ENST00000474256 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
CDPF1-205ENST00000474256 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
CDPF1-205ENST00000474256 EIF3AQ14152 1382 aaKnown RBP22.93■■□□□ 1.26
CDPF1-205ENST00000474256 PRR36Q9H6K5 1346 aa22.93■■□□□ 1.26
CDPF1-205ENST00000474256 PMFBP1Q8TBY8 1022 aa22.93■■□□□ 1.26
CDPF1-205ENST00000474256 UPF1Q92900 1129 aaKnown RBP eCLIP22.93■■□□□ 1.26
CDPF1-205ENST00000474256 RGS12O14924 1447 aa22.92■■□□□ 1.26
CDPF1-205ENST00000474256 BCL9LQ86UU0 1499 aa22.92■■□□□ 1.26
CDPF1-205ENST00000474256 RGPD8O14715 1765 aaPredicted RBP22.91■■□□□ 1.26
CDPF1-205ENST00000474256 TULP4Q9NRJ4 1543 aa22.91■■□□□ 1.26
CDPF1-205ENST00000474256 ATRNO75882 1429 aa22.91■■□□□ 1.26
CDPF1-205ENST00000474256 NBPF1Q3BBV0 1214 aa22.88■■□□□ 1.25
CDPF1-205ENST00000474256 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
CDPF1-205ENST00000474256 ARHGEF28Q8N1W1 1705 aaKnown RBP22.87■■□□□ 1.25
CDPF1-205ENST00000474256 KIAA1210Q9ULL0 1709 aa22.85■■□□□ 1.25
CDPF1-205ENST00000474256 CABLES1Q8TDN4 633 aa22.85■■□□□ 1.25
CDPF1-205ENST00000474256 SLIT2O94813 1529 aa22.85■■□□□ 1.25
CDPF1-205ENST00000474256 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
CDPF1-205ENST00000474256 LMOD2Q6P5Q4 547 aa22.84■■□□□ 1.25
CDPF1-205ENST00000474256 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
CDPF1-205ENST00000474256 MARF1Q9Y4F3 1742 aaKnown RBP22.84■■□□□ 1.25
CDPF1-205ENST00000474256 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
CDPF1-205ENST00000474256 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
CDPF1-205ENST00000474256 ATP7BP35670 1465 aa22.82■■□□□ 1.24
CDPF1-205ENST00000474256 HAP1P54257 671 aaPredicted RBP22.82■■□□□ 1.24
CDPF1-205ENST00000474256 GJD4Q96KN9 370 aaPredicted RBP22.82■■□□□ 1.24
CDPF1-205ENST00000474256 SIN3AQ96ST3 1273 aa22.82■■□□□ 1.24
CDPF1-205ENST00000474256 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
CDPF1-205ENST00000474256 NGDNQ8NEJ9 315 aaKnown RBP22.81■■□□□ 1.24
CDPF1-205ENST00000474256 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
CDPF1-205ENST00000474256 TRPM3Q9HCF6 1732 aaPredicted RBP22.79■■□□□ 1.24
CDPF1-205ENST00000474256 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
CDPF1-205ENST00000474256 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.23
CDPF1-205ENST00000474256 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
CDPF1-205ENST00000474256 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
CDPF1-205ENST00000474256 FAM83GA6ND36 823 aa22.75■■□□□ 1.23
CDPF1-205ENST00000474256 NEUROD1Q13562 356 aa22.75■■□□□ 1.23
CDPF1-205ENST00000474256 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
CDPF1-205ENST00000474256 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
CDPF1-205ENST00000474256 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
CDPF1-205ENST00000474256 VPS72Q15906 364 aa22.74■■□□□ 1.23
CDPF1-205ENST00000474256 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
CDPF1-205ENST00000474256 ABCA3Q99758 1704 aa22.74■■□□□ 1.23
CDPF1-205ENST00000474256 PAK3O75914 559 aaPredicted RBP22.73■■□□□ 1.23
CDPF1-205ENST00000474256 GLI3P10071 1580 aa22.72■■□□□ 1.23
CDPF1-205ENST00000474256 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms