RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
CPA4-205ENST00000474254 PIK3C2GO75747 1445 aa24.04■■□□□ 1.44
CPA4-205ENST00000474254 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
CPA4-205ENST00000474254 ADGRF5Q8IZF2 1346 aa24.04■■□□□ 1.44
CPA4-205ENST00000474254 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
CPA4-205ENST00000474254 MYOM2P54296 1465 aa24.02■■□□□ 1.44
CPA4-205ENST00000474254 ADAMTS2O95450 1211 aa24.02■■□□□ 1.44
CPA4-205ENST00000474254 SOS2Q07890 1332 aaPredicted RBP24.02■■□□□ 1.44
CPA4-205ENST00000474254 NGLY1Q96IV0 654 aa24.01■■□□□ 1.43
CPA4-205ENST00000474254 QTRT2Q9H974 415 aaKnown RBP24.01■■□□□ 1.43
CPA4-205ENST00000474254 NRXN1Q9ULB1 1477 aa24■■□□□ 1.43
CPA4-205ENST00000474254 RBM6P78332 1123 aaKnown RBP24■■□□□ 1.43
CPA4-205ENST00000474254 RGS12O14924 1447 aa23.98■■□□□ 1.43
CPA4-205ENST00000474254 COL22A1Q8NFW1 1626 aaPredicted RBP23.98■■□□□ 1.43
CPA4-205ENST00000474254 TECPR2O15040 1411 aa23.97■■□□□ 1.43
CPA4-205ENST00000474254 ESCO1Q5FWF5 840 aa23.97■■□□□ 1.43
CPA4-205ENST00000474254 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
CPA4-205ENST00000474254 STK26Q9P289 416 aa23.96■■□□□ 1.43
CPA4-205ENST00000474254 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
CPA4-205ENST00000474254 USP21Q9UK80 565 aa23.93■■□□□ 1.42
CPA4-205ENST00000474254 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
CPA4-205ENST00000474254 PXDNQ92626 1479 aa23.9■■□□□ 1.42
CPA4-205ENST00000474254 WAPLQ7Z5K2 1190 aa23.9■■□□□ 1.42
CPA4-205ENST00000474254 TRPC5Q9UL62 973 aaPredicted RBP23.9■■□□□ 1.42
CPA4-205ENST00000474254 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
CPA4-205ENST00000474254 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
CPA4-205ENST00000474254 NUTM2FA1L443 756 aa23.89■■□□□ 1.41
CPA4-205ENST00000474254 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
CPA4-205ENST00000474254 FOXO3O43524 673 aa23.88■■□□□ 1.41
CPA4-205ENST00000474254 TMEM132EQ6IEE7 984 aa23.88■■□□□ 1.41
CPA4-205ENST00000474254 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
CPA4-205ENST00000474254 XPCQ01831 940 aaPredicted RBP23.87■■□□□ 1.41
CPA4-205ENST00000474254 PLEKHH1Q9ULM0 1364 aa23.86■■□□□ 1.41
CPA4-205ENST00000474254 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
CPA4-205ENST00000474254 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
CPA4-205ENST00000474254 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
CPA4-205ENST00000474254 ATRNO75882 1429 aa23.84■■□□□ 1.41
CPA4-205ENST00000474254 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
CPA4-205ENST00000474254 DHX57Q6P158 1386 aaKnown RBP23.8■■□□□ 1.4
CPA4-205ENST00000474254 DLC1Q96QB1 1528 aa23.8■■□□□ 1.4
CPA4-205ENST00000474254 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
CPA4-205ENST00000474254 RGPD8O14715 1765 aaPredicted RBP23.79■■□□□ 1.4
CPA4-205ENST00000474254 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
CPA4-205ENST00000474254 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.78■■□□□ 1.4
CPA4-205ENST00000474254 BCL9LQ86UU0 1499 aa23.76■■□□□ 1.39
CPA4-205ENST00000474254 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
CPA4-205ENST00000474254 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
CPA4-205ENST00000474254 SPATA31A3Q5VYP0 1347 aa23.76■■□□□ 1.39
CPA4-205ENST00000474254 KIAA1210Q9ULL0 1709 aa23.76■■□□□ 1.39
CPA4-205ENST00000474254 KRT28Q7Z3Y7 464 aa23.75■■□□□ 1.39
CPA4-205ENST00000474254 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
CPA4-205ENST00000474254 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
CPA4-205ENST00000474254 HAP1P54257 671 aaPredicted RBP23.74■■□□□ 1.39
CPA4-205ENST00000474254 ARHGEF28Q8N1W1 1705 aaKnown RBP23.73■■□□□ 1.39
CPA4-205ENST00000474254 PSME1Q06323 249 aa23.73■■□□□ 1.39
CPA4-205ENST00000474254 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
CPA4-205ENST00000474254 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
CPA4-205ENST00000474254 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
CPA4-205ENST00000474254 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
CPA4-205ENST00000474254 TNS3Q68CZ2 1445 aa23.72■■□□□ 1.39
CPA4-205ENST00000474254 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
CPA4-205ENST00000474254 POGKQ9P215 609 aa23.71■■□□□ 1.39
CPA4-205ENST00000474254 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
CPA4-205ENST00000474254 SLIT2O94813 1529 aa23.69■■□□□ 1.38
CPA4-205ENST00000474254 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
CPA4-205ENST00000474254 GLI3P10071 1580 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 PLEKHG5O94827 1062 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 ABCA3Q99758 1704 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 PLCH1Q4KWH8 1693 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 ANKARQ7Z5J8 1434 aa23.66■■□□□ 1.38
CPA4-205ENST00000474254 SBNO1A3KN83 1393 aa23.65■■□□□ 1.38
CPA4-205ENST00000474254 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
CPA4-205ENST00000474254 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
CPA4-205ENST00000474254 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
CPA4-205ENST00000474254 EP400Q96L91 3159 aa23.63■■□□□ 1.37
CPA4-205ENST00000474254 CABLES1Q8TDN4 633 aa23.62■■□□□ 1.37
CPA4-205ENST00000474254 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
CPA4-205ENST00000474254 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
CPA4-205ENST00000474254 PMFBP1Q8TBY8 1022 aa23.61■■□□□ 1.37
CPA4-205ENST00000474254 ZRANB1Q9UGI0 708 aa23.6■■□□□ 1.37
CPA4-205ENST00000474254 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
CPA4-205ENST00000474254 BRWD3Q6RI45 1802 aa23.6■■□□□ 1.37
CPA4-205ENST00000474254 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.37
CPA4-205ENST00000474254 ITSN1Q15811 1721 aa23.58■■□□□ 1.37
CPA4-205ENST00000474254 TRPM3Q9HCF6 1732 aaPredicted RBP23.58■■□□□ 1.37
CPA4-205ENST00000474254 MINK1Q8N4C8 1332 aaPredicted RBP23.58■■□□□ 1.36
CPA4-205ENST00000474254 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
CPA4-205ENST00000474254 VPS72Q15906 364 aa23.57■■□□□ 1.36
CPA4-205ENST00000474254 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
CPA4-205ENST00000474254 TRPM1Q7Z4N2 1603 aa23.55■■□□□ 1.36
CPA4-205ENST00000474254 BLMP54132 1417 aaPredicted RBP23.55■■□□□ 1.36
CPA4-205ENST00000474254 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
CPA4-205ENST00000474254 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
CPA4-205ENST00000474254 SF3B2Q13435 895 aaKnown RBP23.52■■□□□ 1.36
CPA4-205ENST00000474254 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
CPA4-205ENST00000474254 COL14A1Q05707 1796 aaKnown RBP23.51■■□□□ 1.35
CPA4-205ENST00000474254 A0A0G2JS52 829 aa23.51■■□□□ 1.35
CPA4-205ENST00000474254 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
CPA4-205ENST00000474254 MYT1Q01538 1121 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms