RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 C1orf167Q5SNV9 1468 aa27.04■■□□□ 1.92
CCDC171-206ENST00000474193 COL16A1Q07092 1604 aaPredicted RBP27.04■■□□□ 1.92
CCDC171-206ENST00000474193 LAMC1P11047 1609 aa27.03■■□□□ 1.92
CCDC171-206ENST00000474193 NRXN1Q9ULB1 1477 aa27.03■■□□□ 1.92
CCDC171-206ENST00000474193 ESCO1Q5FWF5 840 aa27■■□□□ 1.91
CCDC171-206ENST00000474193 POGKQ9P215 609 aa27■■□□□ 1.91
CCDC171-206ENST00000474193 ORAI2Q96SN7 254 aa26.99■■□□□ 1.91
CCDC171-206ENST00000474193 KNDC1Q76NI1 1749 aa26.97■■□□□ 1.91
CCDC171-206ENST00000474193 NUTM2BA6NNL0 878 aaPredicted RBP26.96■■□□□ 1.91
CCDC171-206ENST00000474193 NUTM2EB1AL46 878 aaPredicted RBP26.96■■□□□ 1.91
CCDC171-206ENST00000474193 NUTM2AQ8IVF1 878 aaPredicted RBP26.96■■□□□ 1.91
CCDC171-206ENST00000474193 DDX17Q92841 729 aaKnown RBP26.96■■□□□ 1.91
CCDC171-206ENST00000474193 NHSL1Q5SYE7 1610 aa26.94■■□□□ 1.9
CCDC171-206ENST00000474193 CDC42BPGQ6DT37 1551 aa26.94■■□□□ 1.9
CCDC171-206ENST00000474193 PRAM1Q96QH2 718 aa26.94■■□□□ 1.9
CCDC171-206ENST00000474193 PLEKHH1Q9ULM0 1364 aa26.94■■□□□ 1.9
CCDC171-206ENST00000474193 SHPRHQ149N8 1683 aa26.93■■□□□ 1.9
CCDC171-206ENST00000474193 NUTM2FA1L443 756 aa26.93■■□□□ 1.9
CCDC171-206ENST00000474193 RGS17Q9UGC6 210 aaPredicted RBP26.93■■□□□ 1.9
CCDC171-206ENST00000474193 NPHP3Q7Z494 1330 aa26.92■■□□□ 1.9
CCDC171-206ENST00000474193 SAFB2Q14151 953 aaKnown RBP eCLIP26.92■■□□□ 1.9
CCDC171-206ENST00000474193 TRAK1Q9UPV9 953 aa26.92■■□□□ 1.9
CCDC171-206ENST00000474193 ZNF772Q68DY9 489 aaPredicted RBP26.89■■□□□ 1.9
CCDC171-206ENST00000474193 SOS2Q07890 1332 aaPredicted RBP26.89■■□□□ 1.89
CCDC171-206ENST00000474193 FOXO3O43524 673 aa26.87■■□□□ 1.89
CCDC171-206ENST00000474193 DLC1Q96QB1 1528 aa26.85■■□□□ 1.89
CCDC171-206ENST00000474193 POTEAQ6S8J7 498 aa26.84■■□□□ 1.89
CCDC171-206ENST00000474193 PNPLA6Q8IY17 1366 aa26.84■■□□□ 1.89
CCDC171-206ENST00000474193 LRP6O75581 1613 aa26.82■■□□□ 1.88
CCDC171-206ENST00000474193 ADGRB1O14514 1584 aa26.81■■□□□ 1.88
CCDC171-206ENST00000474193 FMN2Q9NZ56 1722 aa26.8■■□□□ 1.88
CCDC171-206ENST00000474193 PSME1Q06323 249 aa26.8■■□□□ 1.88
CCDC171-206ENST00000474193 PHF8Q9UPP1 1060 aa26.8■■□□□ 1.88
CCDC171-206ENST00000474193 NEUROD1Q13562 356 aa26.79■■□□□ 1.88
CCDC171-206ENST00000474193 MINK1Q8N4C8 1332 aaPredicted RBP26.79■■□□□ 1.88
CCDC171-206ENST00000474193 EIF3AQ14152 1382 aaKnown RBP26.79■■□□□ 1.88
CCDC171-206ENST00000474193 XPCQ01831 940 aaPredicted RBP26.78■■□□□ 1.88
CCDC171-206ENST00000474193 C8orf37Q96NL8 207 aa26.77■■□□□ 1.88
CCDC171-206ENST00000474193 HIRIP3Q9BW71 556 aaPredicted RBP26.77■■□□□ 1.88
CCDC171-206ENST00000474193 ADAMTS2O95450 1211 aa26.76■■□□□ 1.87
CCDC171-206ENST00000474193 KRT28Q7Z3Y7 464 aa26.76■■□□□ 1.87
CCDC171-206ENST00000474193 NGLY1Q96IV0 654 aa26.76■■□□□ 1.87
CCDC171-206ENST00000474193 SIN3AQ96ST3 1273 aa26.75■■□□□ 1.87
CCDC171-206ENST00000474193 AFF2P51816 1311 aa26.74■■□□□ 1.87
CCDC171-206ENST00000474193 KIF1AQ12756 1690 aa26.74■■□□□ 1.87
CCDC171-206ENST00000474193 WASLO00401 505 aaPredicted RBP26.73■■□□□ 1.87
CCDC171-206ENST00000474193 L3MBTL2Q969R5 705 aa26.73■■□□□ 1.87
CCDC171-206ENST00000474193 ANKARQ7Z5J8 1434 aa26.73■■□□□ 1.87
CCDC171-206ENST00000474193 RXRBP28702 533 aa26.71■■□□□ 1.87
CCDC171-206ENST00000474193 KIAA1210Q9ULL0 1709 aa26.7■■□□□ 1.87
CCDC171-206ENST00000474193 PXDNQ92626 1479 aa26.7■■□□□ 1.87
CCDC171-206ENST00000474193 PMFBP1Q8TBY8 1022 aa26.69■■□□□ 1.86
CCDC171-206ENST00000474193 SPATA31A3Q5VYP0 1347 aa26.68■■□□□ 1.86
CCDC171-206ENST00000474193 ADGRB2O60241 1585 aa26.68■■□□□ 1.86
CCDC171-206ENST00000474193 HAP1P54257 671 aaPredicted RBP26.68■■□□□ 1.86
CCDC171-206ENST00000474193 NBPF1Q3BBV0 1214 aa26.68■■□□□ 1.86
CCDC171-206ENST00000474193 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
CCDC171-206ENST00000474193 LMOD2Q6P5Q4 547 aa26.67■■□□□ 1.86
CCDC171-206ENST00000474193 QTRT2Q9H974 415 aaKnown RBP26.66■■□□□ 1.86
CCDC171-206ENST00000474193 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
CCDC171-206ENST00000474193 GPRASP1Q5JY77 1395 aa26.65■■□□□ 1.86
CCDC171-206ENST00000474193 USP21Q9UK80 565 aa26.63■■□□□ 1.85
CCDC171-206ENST00000474193 COL22A1Q8NFW1 1626 aaPredicted RBP26.63■■□□□ 1.85
CCDC171-206ENST00000474193 ARHGEF28Q8N1W1 1705 aaKnown RBP26.62■■□□□ 1.85
CCDC171-206ENST00000474193 CDK19Q9BWU1 502 aa26.62■■□□□ 1.85
CCDC171-206ENST00000474193 SBNO1A3KN83 1393 aa26.61■■□□□ 1.85
CCDC171-206ENST00000474193 TULP4Q9NRJ4 1543 aa26.61■■□□□ 1.85
CCDC171-206ENST00000474193 NUDT16Q96DE0 195 aaKnown RBP26.61■■□□□ 1.85
CCDC171-206ENST00000474193 RBM6P78332 1123 aaKnown RBP26.6■■□□□ 1.85
CCDC171-206ENST00000474193 CENPJQ9HC77 1338 aaPredicted RBP26.6■■□□□ 1.85
CCDC171-206ENST00000474193 ARHGEF10O15013 1369 aa26.59■■□□□ 1.85
CCDC171-206ENST00000474193 TNS3Q68CZ2 1445 aa26.59■■□□□ 1.85
CCDC171-206ENST00000474193 FNBP4Q8N3X1 1017 aaPredicted RBP26.58■■□□□ 1.85
CCDC171-206ENST00000474193 TRPC5Q9UL62 973 aaPredicted RBP26.58■■□□□ 1.85
CCDC171-206ENST00000474193 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
CCDC171-206ENST00000474193 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
CCDC171-206ENST00000474193 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
CCDC171-206ENST00000474193 CCDC61Q9Y6R9 512 aa26.56■■□□□ 1.84
CCDC171-206ENST00000474193 USP32Q8NFA0 1604 aa26.56■■□□□ 1.84
CCDC171-206ENST00000474193 PAK3O75914 559 aaPredicted RBP26.55■■□□□ 1.84
CCDC171-206ENST00000474193 SRPK2P78362 688 aaKnown RBP26.55■■□□□ 1.84
CCDC171-206ENST00000474193 ROCK2O75116 1388 aaKnown RBP26.55■■□□□ 1.84
CCDC171-206ENST00000474193 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
CCDC171-206ENST00000474193 CDK12Q9NYV4 1490 aaPredicted RBP26.51■■□□□ 1.83
CCDC171-206ENST00000474193 ITSN1Q15811 1721 aa26.51■■□□□ 1.83
CCDC171-206ENST00000474193 CABLES1Q8TDN4 633 aa26.5■■□□□ 1.83
CCDC171-206ENST00000474193 ATP7BP35670 1465 aa26.48■■□□□ 1.83
CCDC171-206ENST00000474193 MARF1Q9Y4F3 1742 aaKnown RBP26.48■■□□□ 1.83
CCDC171-206ENST00000474193 CLSPNQ9HAW4 1339 aa26.47■■□□□ 1.83
CCDC171-206ENST00000474193 EVC2Q86UK5 1308 aa26.46■■□□□ 1.83
CCDC171-206ENST00000474193 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
CCDC171-206ENST00000474193 UNC5CLQ8IV45 518 aa26.46■■□□□ 1.83
CCDC171-206ENST00000474193 TRPM1Q7Z4N2 1603 aa26.46■■□□□ 1.83
CCDC171-206ENST00000474193 ACEP12821 1306 aa26.45■■□□□ 1.83
CCDC171-206ENST00000474193 NBPF8Q3BBV2 869 aa26.45■■□□□ 1.82
CCDC171-206ENST00000474193 CABP2Q9NPB3 220 aa26.45■■□□□ 1.82
CCDC171-206ENST00000474193 CARD11Q9BXL7 1154 aa26.43■■□□□ 1.82
CCDC171-206ENST00000474193 BCL9LQ86UU0 1499 aa26.42■■□□□ 1.82
CCDC171-206ENST00000474193 ATRNO75882 1429 aa26.41■■□□□ 1.82
CCDC171-206ENST00000474193 GJD4Q96KN9 370 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms