RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
TRAPPC12-217ENST00000473348 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
TRAPPC12-217ENST00000473348 RGPD8O14715 1765 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC12-217ENST00000473348 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.419e-7■■■□□ 15.2
TRAPPC12-217ENST00000473348 CDC42BPGQ6DT37 1551 aa17.62■□□□□ 0.41
TRAPPC12-217ENST00000473348 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
TRAPPC12-217ENST00000473348 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
TRAPPC12-217ENST00000473348 TESK2Q96S53 571 aa17.6■□□□□ 0.41
TRAPPC12-217ENST00000473348 ADGRL3Q9HAR2 1447 aa17.6■□□□□ 0.41
TRAPPC12-217ENST00000473348 MYOM1P52179 1685 aa17.59■□□□□ 0.41
TRAPPC12-217ENST00000473348 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC12-217ENST00000473348 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC12-217ENST00000473348 TOPAZ1Q8N9V7 1692 aa17.58■□□□□ 0.4
TRAPPC12-217ENST00000473348 DISP3Q9P2K9 1392 aa17.57■□□□□ 0.4
TRAPPC12-217ENST00000473348 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
TRAPPC12-217ENST00000473348 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
TRAPPC12-217ENST00000473348 RBM33Q96EV2 1170 aaKnown RBP17.56■□□□□ 0.4
TRAPPC12-217ENST00000473348 NCOA3Q9Y6Q9 1424 aa17.55■□□□□ 0.4
TRAPPC12-217ENST00000473348 TMF1P82094 1093 aa17.55■□□□□ 0.4
TRAPPC12-217ENST00000473348 C14orf37Q86TY3 774 aa17.54■□□□□ 0.4
TRAPPC12-217ENST00000473348 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
TRAPPC12-217ENST00000473348 SLC24A1O60721 1099 aa17.53■□□□□ 0.4
TRAPPC12-217ENST00000473348 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC12-217ENST00000473348 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC12-217ENST00000473348 DCCP43146 1447 aa17.51■□□□□ 0.39
TRAPPC12-217ENST00000473348 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
TRAPPC12-217ENST00000473348 ATP7BP35670 1465 aa17.5■□□□□ 0.39
TRAPPC12-217ENST00000473348 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
TRAPPC12-217ENST00000473348 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-217ENST00000473348 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
TRAPPC12-217ENST00000473348 MSH6P52701 1360 aa17.5■□□□□ 0.39
TRAPPC12-217ENST00000473348 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
TRAPPC12-217ENST00000473348 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-217ENST00000473348 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
TRAPPC12-217ENST00000473348 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
TRAPPC12-217ENST00000473348 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
TRAPPC12-217ENST00000473348 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
TRAPPC12-217ENST00000473348 KIF1AQ12756 1690 aa17.47■□□□□ 0.39
TRAPPC12-217ENST00000473348 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
TRAPPC12-217ENST00000473348 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
TRAPPC12-217ENST00000473348 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
TRAPPC12-217ENST00000473348 MON2Q7Z3U7 1717 aa17.46■□□□□ 0.39
TRAPPC12-217ENST00000473348 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
TRAPPC12-217ENST00000473348 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
TRAPPC12-217ENST00000473348 MST1RQ04912 1400 aa17.44■□□□□ 0.38
TRAPPC12-217ENST00000473348 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
TRAPPC12-217ENST00000473348 ATF3P18847 181 aa17.43■□□□□ 0.38
TRAPPC12-217ENST00000473348 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
TRAPPC12-217ENST00000473348 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
TRAPPC12-217ENST00000473348 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
TRAPPC12-217ENST00000473348 NUDT16Q96DE0 195 aaKnown RBP17.41■□□□□ 0.38
TRAPPC12-217ENST00000473348 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
TRAPPC12-217ENST00000473348 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
TRAPPC12-217ENST00000473348 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
TRAPPC12-217ENST00000473348 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
TRAPPC12-217ENST00000473348 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
TRAPPC12-217ENST00000473348 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
TRAPPC12-217ENST00000473348 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
TRAPPC12-217ENST00000473348 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
TRAPPC12-217ENST00000473348 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
TRAPPC12-217ENST00000473348 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
TRAPPC12-217ENST00000473348 SLC12A5Q9H2X9 1139 aa17.35■□□□□ 0.37
TRAPPC12-217ENST00000473348 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
TRAPPC12-217ENST00000473348 CERKQ8TCT0 537 aa17.34■□□□□ 0.37
TRAPPC12-217ENST00000473348 TRPM3Q9HCF6 1732 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC12-217ENST00000473348 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
TRAPPC12-217ENST00000473348 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
TRAPPC12-217ENST00000473348 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
TRAPPC12-217ENST00000473348 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
TRAPPC12-217ENST00000473348 POLR3AO14802 1390 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC12-217ENST00000473348 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
TRAPPC12-217ENST00000473348 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
TRAPPC12-217ENST00000473348 PHF8Q9UPP1 1060 aa17.32■□□□□ 0.36
TRAPPC12-217ENST00000473348 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
TRAPPC12-217ENST00000473348 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
TRAPPC12-217ENST00000473348 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
TRAPPC12-217ENST00000473348 ACEP12821 1306 aa17.3■□□□□ 0.36
TRAPPC12-217ENST00000473348 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
TRAPPC12-217ENST00000473348 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 PANK3Q9H999 370 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 PHLPP1O60346 1717 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 USP6P35125 1406 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
TRAPPC12-217ENST00000473348 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
TRAPPC12-217ENST00000473348 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
TRAPPC12-217ENST00000473348 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC12-217ENST00000473348 USP54Q70EL1 1684 aa17.27■□□□□ 0.36
TRAPPC12-217ENST00000473348 TOM1O60784 492 aa17.27■□□□□ 0.36
TRAPPC12-217ENST00000473348 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
TRAPPC12-217ENST00000473348 EDC4Q6P2E9 1401 aaKnown RBP17.27■□□□□ 0.35
TRAPPC12-217ENST00000473348 PXDNQ92626 1479 aa17.26■□□□□ 0.35
TRAPPC12-217ENST00000473348 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
TRAPPC12-217ENST00000473348 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC12-217ENST00000473348 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
TRAPPC12-217ENST00000473348 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
TRAPPC12-217ENST00000473348 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
TRAPPC12-217ENST00000473348 FOXO3O43524 673 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms