RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
PCCB-211ENST00000473073 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
PCCB-211ENST00000473073 PANK3Q9H999 370 aa17.37■□□□□ 0.37
PCCB-211ENST00000473073 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
PCCB-211ENST00000473073 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
PCCB-211ENST00000473073 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
PCCB-211ENST00000473073 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
PCCB-211ENST00000473073 KCNA6P17658 529 aa17.33■□□□□ 0.37
PCCB-211ENST00000473073 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.36
PCCB-211ENST00000473073 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
PCCB-211ENST00000473073 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
PCCB-211ENST00000473073 CDK19Q9BWU1 502 aa17.31■□□□□ 0.36
PCCB-211ENST00000473073 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
PCCB-211ENST00000473073 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
PCCB-211ENST00000473073 SLC12A5Q9H2X9 1139 aa17.31■□□□□ 0.36
PCCB-211ENST00000473073 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
PCCB-211ENST00000473073 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
PCCB-211ENST00000473073 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
PCCB-211ENST00000473073 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
PCCB-211ENST00000473073 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
PCCB-211ENST00000473073 STRCQ7RTU9 1775 aa17.27■□□□□ 0.36
PCCB-211ENST00000473073 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
PCCB-211ENST00000473073 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
PCCB-211ENST00000473073 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
PCCB-211ENST00000473073 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
PCCB-211ENST00000473073 NUTM2FA1L443 756 aa17.25■□□□□ 0.35
PCCB-211ENST00000473073 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
PCCB-211ENST00000473073 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
PCCB-211ENST00000473073 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
PCCB-211ENST00000473073 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
PCCB-211ENST00000473073 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
PCCB-211ENST00000473073 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
PCCB-211ENST00000473073 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
PCCB-211ENST00000473073 CABP1Q9NZU7 370 aa17.22■□□□□ 0.35
PCCB-211ENST00000473073 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
PCCB-211ENST00000473073 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
PCCB-211ENST00000473073 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
PCCB-211ENST00000473073 ATP7BP35670 1465 aa17.21■□□□□ 0.35
PCCB-211ENST00000473073 STRCP1A6NGW2 1772 aa17.21■□□□□ 0.35
PCCB-211ENST00000473073 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
PCCB-211ENST00000473073 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
PCCB-211ENST00000473073 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
PCCB-211ENST00000473073 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
PCCB-211ENST00000473073 CCER2I3L3R5 266 aa17.2■□□□□ 0.34
PCCB-211ENST00000473073 PPIP5K1Q6PFW1 1433 aa17.2■□□□□ 0.34
PCCB-211ENST00000473073 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
PCCB-211ENST00000473073 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
PCCB-211ENST00000473073 PARD3Q8TEW0 1356 aa17.17■□□□□ 0.34
PCCB-211ENST00000473073 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
PCCB-211ENST00000473073 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
PCCB-211ENST00000473073 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
PCCB-211ENST00000473073 PROSER2Q86WR7 435 aaPredicted RBP17.15■□□□□ 0.34
PCCB-211ENST00000473073 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
PCCB-211ENST00000473073 RALBP1Q15311 655 aa17.15■□□□□ 0.34
PCCB-211ENST00000473073 TERF2IPQ9NYB0 399 aa17.15■□□□□ 0.34
PCCB-211ENST00000473073 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.34
PCCB-211ENST00000473073 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
PCCB-211ENST00000473073 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
PCCB-211ENST00000473073 HDGFL2Q7Z4V5 671 aaPredicted RBP17.14■□□□□ 0.33
PCCB-211ENST00000473073 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
PCCB-211ENST00000473073 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
PCCB-211ENST00000473073 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
PCCB-211ENST00000473073 ITSN1Q15811 1721 aa17.12■□□□□ 0.33
PCCB-211ENST00000473073 ZNF335Q9H4Z2 1342 aaPredicted RBP17.11■□□□□ 0.33
PCCB-211ENST00000473073 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
PCCB-211ENST00000473073 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
PCCB-211ENST00000473073 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
PCCB-211ENST00000473073 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
PCCB-211ENST00000473073 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
PCCB-211ENST00000473073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCCB-211ENST00000473073 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
PCCB-211ENST00000473073 ACEP12821 1306 aa17.09■□□□□ 0.33
PCCB-211ENST00000473073 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
PCCB-211ENST00000473073 MON2Q7Z3U7 1717 aa17.09■□□□□ 0.33
PCCB-211ENST00000473073 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
PCCB-211ENST00000473073 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
PCCB-211ENST00000473073 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
PCCB-211ENST00000473073 ANKARQ7Z5J8 1434 aa17.07■□□□□ 0.32
PCCB-211ENST00000473073 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
PCCB-211ENST00000473073 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
PCCB-211ENST00000473073 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
PCCB-211ENST00000473073 FYB1O15117 783 aa17.06■□□□□ 0.32
PCCB-211ENST00000473073 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
PCCB-211ENST00000473073 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
PCCB-211ENST00000473073 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
PCCB-211ENST00000473073 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
PCCB-211ENST00000473073 NRKQ7Z2Y5 1582 aa17.04■□□□□ 0.32
PCCB-211ENST00000473073 NME9Q86XW9 330 aa17.04■□□□□ 0.32
PCCB-211ENST00000473073 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
PCCB-211ENST00000473073 NSD2O96028 1365 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 ANKRD26Q9UPS8 1709 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 LRRC7Q96NW7 1537 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 USP6P35125 1406 aa17.03■□□□□ 0.32
PCCB-211ENST00000473073 ESCO1Q5FWF5 840 aa17.02■□□□□ 0.32
PCCB-211ENST00000473073 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
PCCB-211ENST00000473073 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.31
PCCB-211ENST00000473073 ORAI2Q96SN7 254 aa17.01■□□□□ 0.31
PCCB-211ENST00000473073 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms