RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 POLR3GLQ9BT43 218 aa6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 NPDC1Q9NQX5 325 aaPredicted RBP6.01□□□□□ -1.45
UBE2D4-210ENST00000473007 FMN1Q68DA7 1419 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 ABCC2Q92887 1545 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 KDM5BQ9UGL1 1544 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 TUSC1Q2TAM9 212 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 RIC3Q7Z5B4 369 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 ABCA8O94911 1581 aa6□□□□□ -1.45
UBE2D4-210ENST00000473007 WASHC4Q2M389 1173 aa5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 CDCA8Q53HL2 280 aa5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 B4GALNT3Q6L9W6 998 aa5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 FAM9AQ8IZU1 332 aaPredicted RBP5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 RAPGEF6Q8TEU7 1601 aa5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 ADCY10Q96PN6 1610 aa5.99□□□□□ -1.45
UBE2D4-210ENST00000473007 HECW2Q9P2P5 1572 aa5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 PITPNM1O00562 1244 aa5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 NOM1Q5C9Z4 860 aaKnown RBP5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 DHX37Q8IY37 1157 aaKnown RBP5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 ZNF710Q8N1W2 664 aa5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 CCER1Q8TC90 406 aaPredicted RBP5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 UPF1Q92900 1129 aaKnown RBP eCLIP5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 ALG2Q9H553 416 aa5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 CDHR5Q9HBB8 845 aa5.98□□□□□ -1.45
UBE2D4-210ENST00000473007 HECW1Q76N89 1606 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 AP1G2O75843 785 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 METTL3Q86U44 580 aaKnown RBP5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 NLRP7Q8WX94 980 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 BCL2L13Q9BXK5 485 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 CWC22Q9HCG8 908 aaKnown RBP5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 TFIP11Q9UBB9 837 aaKnown RBP5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 PTPRGP23470 1445 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 UACAQ9BZF9 1416 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 KIF13AQ9H1H9 1805 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 GLI2P10070 1586 aa5.97□□□□□ -1.45
UBE2D4-210ENST00000473007 ARHGAP35Q9NRY4 1499 aa5.96□□□□□ -1.45
UBE2D4-210ENST00000473007 MAP3K1Q13233 1512 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 SPTLC1O15269 473 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 BRD2P25440 801 aaKnown RBP5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 TSR1Q2NL82 804 aaKnown RBP5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 GJD4Q96KN9 370 aaPredicted RBP5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 TMEM106CQ9BVX2 250 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 NDUFB9Q9Y6M9 179 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 CCDC18Q5T9S5 1454 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 FYCO1Q9BQS8 1478 aa5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 ZCCHC11Q5TAX3 1644 aaKnown RBP5.96□□□□□ -1.46
UBE2D4-210ENST00000473007 CFAP43Q8NDM7 1665 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 C2orf72A6NCS6 295 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 PAK3O75914 559 aaPredicted RBP5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 OATP04181 439 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 USP17L8P0C7I0 530 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 MICALL2Q8IY33 904 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 SPIRE2Q8WWL2 714 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 UCN2Q96RP3 112 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 PLB1Q6P1J6 1458 aa5.95□□□□□ -1.46
UBE2D4-210ENST00000473007 KIF3CO14782 793 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 PHLDB3Q6NSJ2 640 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 ANKRD13AQ8IZ07 590 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 GIPC2Q8TF65 315 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 ARAP3Q8WWN8 1544 aa5.94□□□□□ -1.46
UBE2D4-210ENST00000473007 CASKIN1Q8WXD9 1431 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 EVI5O60447 810 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 GPR37L1O60883 481 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 LILRB3O75022 631 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 NCLP19338 710 aaKnown RBP5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 VAMP1P23763 118 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 ZC3H6P61129 1189 aaKnown RBP5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 VAC14Q08AM6 782 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 QPCTQ16769 361 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 RTL5Q5HYW3 569 aaPredicted RBP5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 PXYLP1Q8TE99 480 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 UBXN4Q92575 508 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 L3MBTL3Q96JM7 780 aaPredicted RBP5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 MAFBQ9Y5Q3 323 aaPredicted RBP5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 LRRIQ1Q96JM4 1722 aa5.93□□□□□ -1.46
UBE2D4-210ENST00000473007 ABCA9Q8IUA7 1624 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 MAP3K4Q9Y6R4 1608 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 CLIP1P30622 1438 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 CEP162Q5TB80 1403 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 NUP153P49790 1475 aaKnown RBP5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 EN1Q05925 392 aaPredicted RBP5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 CSPP1Q1MSJ5 1256 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 DPY19L2Q6NUT2 758 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 RSBN1LQ6PCB5 846 aaPredicted RBP5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 DIP2BQ9P265 1576 aa5.92□□□□□ -1.46
UBE2D4-210ENST00000473007 ABCC10Q5T3U5 1492 aa5.91□□□□□ -1.46
UBE2D4-210ENST00000473007 ELOAQ14241 798 aaKnown RBP5.91□□□□□ -1.46
UBE2D4-210ENST00000473007 PRR7Q8TB68 274 aa5.91□□□□□ -1.46
UBE2D4-210ENST00000473007 PPP1R1BQ9UD71 204 aaPredicted RBP5.91□□□□□ -1.46
UBE2D4-210ENST00000473007 WDR7Q9Y4E6 1490 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 CFAP74Q9C0B2 1584 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 SOWAHDA6NJG2 315 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 MARSP56192 900 aaKnown RBP5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 SF3A1Q15459 793 aaKnown RBP5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 NAALADL2Q58DX5 795 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 TMEM164Q5U3C3 297 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 ZMIZ1Q9ULJ6 1067 aa5.9□□□□□ -1.46
UBE2D4-210ENST00000473007 ADGRG1Q9Y653 693 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms