RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 NUTM2EB1AL46 878 aaPredicted RBP22.6■■□□□ 1.21
VTI1A-203ENST00000472892 NUTM2AQ8IVF1 878 aaPredicted RBP22.6■■□□□ 1.21
VTI1A-203ENST00000472892 HRCP23327 699 aa22.59■■□□□ 1.21
VTI1A-203ENST00000472892 ZNF772Q68DY9 489 aaPredicted RBP22.59■■□□□ 1.21
VTI1A-203ENST00000472892 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
VTI1A-203ENST00000472892 C14orf93Q9H972 538 aaKnown RBP22.59■■□□□ 1.21
VTI1A-203ENST00000472892 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
VTI1A-203ENST00000472892 SIRT1Q96EB6 747 aa22.57■■□□□ 1.2
VTI1A-203ENST00000472892 PNPLA6Q8IY17 1366 aa22.57■■□□□ 1.2
VTI1A-203ENST00000472892 LAMC1P11047 1609 aa22.57■■□□□ 1.2
VTI1A-203ENST00000472892 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
VTI1A-203ENST00000472892 YTHDC2Q9H6S0 1430 aaKnown RBP22.55■■□□□ 1.2
VTI1A-203ENST00000472892 CDC42BPGQ6DT37 1551 aa22.54■■□□□ 1.2
VTI1A-203ENST00000472892 MYOM2P54296 1465 aa22.54■■□□□ 1.2
VTI1A-203ENST00000472892 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
VTI1A-203ENST00000472892 ESCO1Q5FWF5 840 aa22.53■■□□□ 1.2
VTI1A-203ENST00000472892 CFAP70Q5T0N1 1121 aa22.53■■□□□ 1.2
VTI1A-203ENST00000472892 POTEDQ86YR6 584 aa22.52■■□□□ 1.2
VTI1A-203ENST00000472892 KNDC1Q76NI1 1749 aa22.5■■□□□ 1.19
VTI1A-203ENST00000472892 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
VTI1A-203ENST00000472892 AFF2P51816 1311 aa22.49■■□□□ 1.19
VTI1A-203ENST00000472892 NPHP3Q7Z494 1330 aa22.48■■□□□ 1.19
VTI1A-203ENST00000472892 RXRBP28702 533 aa22.47■■□□□ 1.19
VTI1A-203ENST00000472892 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
VTI1A-203ENST00000472892 NUTM2FA1L443 756 aa22.46■■□□□ 1.19
VTI1A-203ENST00000472892 FOXO3O43524 673 aa22.46■■□□□ 1.19
VTI1A-203ENST00000472892 STAC3Q96MF2 364 aa22.44■■□□□ 1.18
VTI1A-203ENST00000472892 ADAMTS2O95450 1211 aa22.43■■□□□ 1.18
VTI1A-203ENST00000472892 PXDNQ92626 1479 aa22.42■■□□□ 1.18
VTI1A-203ENST00000472892 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
VTI1A-203ENST00000472892 NGLY1Q96IV0 654 aa22.42■■□□□ 1.18
VTI1A-203ENST00000472892 PRAM1Q96QH2 718 aa22.42■■□□□ 1.18
VTI1A-203ENST00000472892 QTRT2Q9H974 415 aaKnown RBP22.41■■□□□ 1.18
VTI1A-203ENST00000472892 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
VTI1A-203ENST00000472892 XPCQ01831 940 aaPredicted RBP22.4■■□□□ 1.18
VTI1A-203ENST00000472892 FMN2Q9NZ56 1722 aa22.4■■□□□ 1.18
VTI1A-203ENST00000472892 DLC1Q96QB1 1528 aa22.39■■□□□ 1.17
VTI1A-203ENST00000472892 CDK12Q9NYV4 1490 aaPredicted RBP22.39■■□□□ 1.17
VTI1A-203ENST00000472892 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.17
VTI1A-203ENST00000472892 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
VTI1A-203ENST00000472892 POGKQ9P215 609 aa22.38■■□□□ 1.17
VTI1A-203ENST00000472892 RBM6P78332 1123 aaKnown RBP22.37■■□□□ 1.17
VTI1A-203ENST00000472892 SAFB2Q14151 953 aaKnown RBP eCLIP22.37■■□□□ 1.17
VTI1A-203ENST00000472892 FNBP4Q8N3X1 1017 aaPredicted RBP22.37■■□□□ 1.17
VTI1A-203ENST00000472892 KRT28Q7Z3Y7 464 aa22.35■■□□□ 1.17
VTI1A-203ENST00000472892 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
VTI1A-203ENST00000472892 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
VTI1A-203ENST00000472892 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
VTI1A-203ENST00000472892 USP21Q9UK80 565 aa22.34■■□□□ 1.17
VTI1A-203ENST00000472892 UPF1Q92900 1129 aaKnown RBP eCLIP22.33■■□□□ 1.17
VTI1A-203ENST00000472892 KIF1AQ12756 1690 aa22.33■■□□□ 1.16
VTI1A-203ENST00000472892 PSME1Q06323 249 aa22.3■■□□□ 1.16
VTI1A-203ENST00000472892 TRPC5Q9UL62 973 aaPredicted RBP22.3■■□□□ 1.16
VTI1A-203ENST00000472892 ANKARQ7Z5J8 1434 aa22.29■■□□□ 1.16
VTI1A-203ENST00000472892 RGPD8O14715 1765 aaPredicted RBP22.28■■□□□ 1.16
VTI1A-203ENST00000472892 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
VTI1A-203ENST00000472892 RGS12O14924 1447 aa22.27■■□□□ 1.16
VTI1A-203ENST00000472892 ADGRB2O60241 1585 aa22.27■■□□□ 1.16
VTI1A-203ENST00000472892 BCL9LQ86UU0 1499 aa22.26■■□□□ 1.15
VTI1A-203ENST00000472892 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
VTI1A-203ENST00000472892 SBNO1A3KN83 1393 aa22.25■■□□□ 1.15
VTI1A-203ENST00000472892 ATRNO75882 1429 aa22.25■■□□□ 1.15
VTI1A-203ENST00000472892 WASLO00401 505 aaPredicted RBP22.25■■□□□ 1.15
VTI1A-203ENST00000472892 PMFBP1Q8TBY8 1022 aa22.25■■□□□ 1.15
VTI1A-203ENST00000472892 USP32Q8NFA0 1604 aa22.24■■□□□ 1.15
VTI1A-203ENST00000472892 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
VTI1A-203ENST00000472892 PRR36Q9H6K5 1346 aa22.23■■□□□ 1.15
VTI1A-203ENST00000472892 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
VTI1A-203ENST00000472892 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
VTI1A-203ENST00000472892 CABLES1Q8TDN4 633 aa22.2■■□□□ 1.14
VTI1A-203ENST00000472892 UNC5CLQ8IV45 518 aa22.19■■□□□ 1.14
VTI1A-203ENST00000472892 ARHGEF10O15013 1369 aa22.19■■□□□ 1.14
VTI1A-203ENST00000472892 TULP4Q9NRJ4 1543 aa22.19■■□□□ 1.14
VTI1A-203ENST00000472892 SLIT2O94813 1529 aa22.18■■□□□ 1.14
VTI1A-203ENST00000472892 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
VTI1A-203ENST00000472892 GJD4Q96KN9 370 aaPredicted RBP22.18■■□□□ 1.14
VTI1A-203ENST00000472892 GPRASP1Q5JY77 1395 aa22.16■■□□□ 1.14
VTI1A-203ENST00000472892 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
VTI1A-203ENST00000472892 NBPF1Q3BBV0 1214 aa22.16■■□□□ 1.14
VTI1A-203ENST00000472892 ARHGEF28Q8N1W1 1705 aaKnown RBP22.15■■□□□ 1.14
VTI1A-203ENST00000472892 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.14
VTI1A-203ENST00000472892 NGDNQ8NEJ9 315 aaKnown RBP22.14■■□□□ 1.13
VTI1A-203ENST00000472892 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
VTI1A-203ENST00000472892 CDK19Q9BWU1 502 aa22.13■■□□□ 1.13
VTI1A-203ENST00000472892 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
VTI1A-203ENST00000472892 PLEKHG5O94827 1062 aa22.12■■□□□ 1.13
VTI1A-203ENST00000472892 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.11■■□□□ 1.13
VTI1A-203ENST00000472892 TRPM3Q9HCF6 1732 aaPredicted RBP22.11■■□□□ 1.13
VTI1A-203ENST00000472892 FAM83GA6ND36 823 aa22.11■■□□□ 1.13
VTI1A-203ENST00000472892 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
VTI1A-203ENST00000472892 ATP7BP35670 1465 aa22.09■■□□□ 1.13
VTI1A-203ENST00000472892 VPS72Q15906 364 aa22.09■■□□□ 1.13
VTI1A-203ENST00000472892 RALGAPBQ86X10 1494 aa22.09■■□□□ 1.13
VTI1A-203ENST00000472892 SIN3AQ96ST3 1273 aa22.08■■□□□ 1.13
VTI1A-203ENST00000472892 CCDC61Q9Y6R9 512 aa22.08■■□□□ 1.13
VTI1A-203ENST00000472892 ALS2Q96Q42 1657 aa22.07■■□□□ 1.12
VTI1A-203ENST00000472892 ABCA3Q99758 1704 aa22.06■■□□□ 1.12
VTI1A-203ENST00000472892 PLEKHG3A1L390 1219 aa22.06■■□□□ 1.12
VTI1A-203ENST00000472892 PAK3O75914 559 aaPredicted RBP22.06■■□□□ 1.12
VTI1A-203ENST00000472892 GLI3P10071 1580 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms