RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
CHEK2-223ENST00000472807 STK26Q9P289 416 aa13.15□□□□□ -0.3
CHEK2-223ENST00000472807 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
CHEK2-223ENST00000472807 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-223ENST00000472807 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-223ENST00000472807 ZNF772Q68DY9 489 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-223ENST00000472807 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-223ENST00000472807 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
CHEK2-223ENST00000472807 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
CHEK2-223ENST00000472807 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
CHEK2-223ENST00000472807 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
CHEK2-223ENST00000472807 ORAI2Q96SN7 254 aa13.12□□□□□ -0.31
CHEK2-223ENST00000472807 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
CHEK2-223ENST00000472807 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-223ENST00000472807 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
CHEK2-223ENST00000472807 PLEKHH1Q9ULM0 1364 aa13.1□□□□□ -0.31
CHEK2-223ENST00000472807 HRCP23327 699 aa13.1□□□□□ -0.31
CHEK2-223ENST00000472807 ESCO1Q5FWF5 840 aa13.1□□□□□ -0.31
CHEK2-223ENST00000472807 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
CHEK2-223ENST00000472807 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
CHEK2-223ENST00000472807 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
CHEK2-223ENST00000472807 CFAP70Q5T0N1 1121 aa13.08□□□□□ -0.32
CHEK2-223ENST00000472807 C8orf37Q96NL8 207 aa13.08□□□□□ -0.32
CHEK2-223ENST00000472807 AFF2P51816 1311 aa13.08□□□□□ -0.32
CHEK2-223ENST00000472807 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
CHEK2-223ENST00000472807 PXDNQ92626 1479 aa13.07□□□□□ -0.32
CHEK2-223ENST00000472807 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
CHEK2-223ENST00000472807 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
CHEK2-223ENST00000472807 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
CHEK2-223ENST00000472807 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
CHEK2-223ENST00000472807 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
CHEK2-223ENST00000472807 RXRBP28702 533 aa13.05□□□□□ -0.32
CHEK2-223ENST00000472807 PRAM1Q96QH2 718 aa13.05□□□□□ -0.32
CHEK2-223ENST00000472807 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
CHEK2-223ENST00000472807 FOXO3O43524 673 aa13.04□□□□□ -0.32
CHEK2-223ENST00000472807 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
CHEK2-223ENST00000472807 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
CHEK2-223ENST00000472807 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
CHEK2-223ENST00000472807 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
CHEK2-223ENST00000472807 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHEK2-223ENST00000472807 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
CHEK2-223ENST00000472807 POGKQ9P215 609 aa13.03□□□□□ -0.32
CHEK2-223ENST00000472807 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
CHEK2-223ENST00000472807 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
CHEK2-223ENST00000472807 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
CHEK2-223ENST00000472807 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
CHEK2-223ENST00000472807 QTRT2Q9H974 415 aaKnown RBP13□□□□□ -0.33
CHEK2-223ENST00000472807 TRAK1Q9UPV9 953 aa13□□□□□ -0.33
CHEK2-223ENST00000472807 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
CHEK2-223ENST00000472807 RBM6P78332 1123 aaKnown RBP12.99□□□□□ -0.33
CHEK2-223ENST00000472807 USP21Q9UK80 565 aa12.99□□□□□ -0.33
CHEK2-223ENST00000472807 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
CHEK2-223ENST00000472807 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
CHEK2-223ENST00000472807 RGS12O14924 1447 aa12.98□□□□□ -0.33
CHEK2-223ENST00000472807 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
CHEK2-223ENST00000472807 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
CHEK2-223ENST00000472807 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
CHEK2-223ENST00000472807 PSME1Q06323 249 aa12.97□□□□□ -0.33
CHEK2-223ENST00000472807 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-223ENST00000472807 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-223ENST00000472807 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-223ENST00000472807 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
CHEK2-223ENST00000472807 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
CHEK2-223ENST00000472807 EP400Q96L91 3159 aa12.97□□□□□ -0.33
CHEK2-223ENST00000472807 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
CHEK2-223ENST00000472807 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-223ENST00000472807 SBNO1A3KN83 1393 aa12.95□□□□□ -0.34
CHEK2-223ENST00000472807 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
CHEK2-223ENST00000472807 KIAA1210Q9ULL0 1709 aa12.95□□□□□ -0.34
CHEK2-223ENST00000472807 ATRNO75882 1429 aa12.95□□□□□ -0.34
CHEK2-223ENST00000472807 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CHEK2-223ENST00000472807 HAP1P54257 671 aaPredicted RBP12.94□□□□□ -0.34
CHEK2-223ENST00000472807 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHEK2-223ENST00000472807 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
CHEK2-223ENST00000472807 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
CHEK2-223ENST00000472807 CACNB1Q02641 598 aaPredicted RBP12.93□□□□□ -0.34
CHEK2-223ENST00000472807 LMOD2Q6P5Q4 547 aa12.93□□□□□ -0.34
CHEK2-223ENST00000472807 PMFBP1Q8TBY8 1022 aa12.93□□□□□ -0.34
CHEK2-223ENST00000472807 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
CHEK2-223ENST00000472807 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
CHEK2-223ENST00000472807 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
CHEK2-223ENST00000472807 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
CHEK2-223ENST00000472807 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
CHEK2-223ENST00000472807 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
CHEK2-223ENST00000472807 SLIT2O94813 1529 aa12.9□□□□□ -0.34
CHEK2-223ENST00000472807 ATAD2Q6PL18 1390 aa12.9□□□□□ -0.34
CHEK2-223ENST00000472807 ATP7BP35670 1465 aa12.9□□□□□ -0.34
CHEK2-223ENST00000472807 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
CHEK2-223ENST00000472807 UNC5CLQ8IV45 518 aa12.89□□□□□ -0.35
CHEK2-223ENST00000472807 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
CHEK2-223ENST00000472807 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
CHEK2-223ENST00000472807 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
CHEK2-223ENST00000472807 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
CHEK2-223ENST00000472807 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
CHEK2-223ENST00000472807 GJD4Q96KN9 370 aaPredicted RBP12.88□□□□□ -0.35
CHEK2-223ENST00000472807 RALGAPBQ86X10 1494 aa12.87□□□□□ -0.35
CHEK2-223ENST00000472807 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
CHEK2-223ENST00000472807 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
CHEK2-223ENST00000472807 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
CHEK2-223ENST00000472807 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms