RNA–Protein interactions for RNA: ENST00000472800.1

AUP1-207, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 4

Gene AUP1, Length 663 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-207ENST00000472800 C19orf44Q9H6X5 657 aa27.97■■■□□ 2.07
AUP1-207ENST00000472800 KNDC1Q76NI1 1749 aa27.97■■■□□ 2.07
AUP1-207ENST00000472800 C14orf37Q86TY3 774 aa27.95■■■□□ 2.06
AUP1-207ENST00000472800 WAPLQ7Z5K2 1190 aa27.94■■■□□ 2.06
AUP1-207ENST00000472800 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
AUP1-207ENST00000472800 POGKQ9P215 609 aa27.94■■■□□ 2.06
AUP1-207ENST00000472800 ROBO1Q9Y6N7 1651 aa27.94■■■□□ 2.06
AUP1-207ENST00000472800 PRAM1Q96QH2 718 aa27.93■■■□□ 2.06
AUP1-207ENST00000472800 MSH6P52701 1360 aa27.93■■■□□ 2.06
AUP1-207ENST00000472800 SLAIN2Q9P270 581 aa27.9■■■□□ 2.06
AUP1-207ENST00000472800 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
AUP1-207ENST00000472800 ADGRL3Q9HAR2 1447 aa27.88■■■□□ 2.05
AUP1-207ENST00000472800 PLEKHH1Q9ULM0 1364 aa27.87■■■□□ 2.05
AUP1-207ENST00000472800 ATF3P18847 181 aa27.87■■■□□ 2.05
AUP1-207ENST00000472800 DCCP43146 1447 aa27.86■■■□□ 2.05
AUP1-207ENST00000472800 EIF3AQ14152 1382 aaKnown RBP27.86■■■□□ 2.05
AUP1-207ENST00000472800 POTEAQ6S8J7 498 aa27.85■■■□□ 2.05
AUP1-207ENST00000472800 CENPJQ9HC77 1338 aaPredicted RBP27.83■■■□□ 2.05
AUP1-207ENST00000472800 SAFB2Q14151 953 aaKnown RBP eCLIP27.82■■■□□ 2.04
AUP1-207ENST00000472800 ARHGEF28Q8N1W1 1705 aaKnown RBP27.81■■■□□ 2.04
AUP1-207ENST00000472800 PHLPP1O60346 1717 aa27.78■■■□□ 2.04
AUP1-207ENST00000472800 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.78■■■□□ 2.04
AUP1-207ENST00000472800 JCADQ9P266 1359 aa27.77■■■□□ 2.04
AUP1-207ENST00000472800 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
AUP1-207ENST00000472800 MINK1Q8N4C8 1332 aaPredicted RBP27.76■■■□□ 2.03
AUP1-207ENST00000472800 SLC24A1O60721 1099 aa27.76■■■□□ 2.03
AUP1-207ENST00000472800 ZEB1P37275 1124 aaPredicted RBP27.76■■■□□ 2.03
AUP1-207ENST00000472800 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
AUP1-207ENST00000472800 WASLO00401 505 aaPredicted RBP27.73■■■□□ 2.03
AUP1-207ENST00000472800 USP47Q96K76 1375 aa27.72■■■□□ 2.03
AUP1-207ENST00000472800 ADGRB2O60241 1585 aa27.71■■■□□ 2.03
AUP1-207ENST00000472800 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
AUP1-207ENST00000472800 SBNO2Q9Y2G9 1366 aa27.71■■■□□ 2.03
AUP1-207ENST00000472800 MST1RQ04912 1400 aa27.69■■■□□ 2.02
AUP1-207ENST00000472800 ST20-MTHFSA0A0A6YYL1 179 aa27.69■■■□□ 2.02
AUP1-207ENST00000472800 EIF4G2P78344 907 aaKnown RBP eCLIP27.68■■■□□ 2.02
AUP1-207ENST00000472800 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
AUP1-207ENST00000472800 CDK19Q9BWU1 502 aa27.67■■■□□ 2.02
AUP1-207ENST00000472800 EVC2Q86UK5 1308 aa27.67■■■□□ 2.02
AUP1-207ENST00000472800 C1orf167Q5SNV9 1468 aa27.65■■■□□ 2.02
AUP1-207ENST00000472800 QRICH2Q9H0J4 1663 aa27.65■■■□□ 2.02
AUP1-207ENST00000472800 TESK2Q96S53 571 aa27.63■■■□□ 2.01
AUP1-207ENST00000472800 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
AUP1-207ENST00000472800 SPATA31A6Q5VVP1 1343 aa27.63■■■□□ 2.01
AUP1-207ENST00000472800 MEX3CQ5U5Q3 659 aaKnown RBP27.62■■■□□ 2.01
AUP1-207ENST00000472800 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
AUP1-207ENST00000472800 NUTM2FA1L443 756 aa27.6■■■□□ 2.01
AUP1-207ENST00000472800 BRINP3Q76B58 766 aa27.6■■■□□ 2.01
AUP1-207ENST00000472800 PUS7Q96PZ0 661 aaKnown RBP27.6■■■□□ 2.01
AUP1-207ENST00000472800 SRPK2P78362 688 aaKnown RBP27.59■■■□□ 2.01
AUP1-207ENST00000472800 ESCO1Q5FWF5 840 aa27.59■■■□□ 2.01
AUP1-207ENST00000472800 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
AUP1-207ENST00000472800 LRP6O75581 1613 aa27.59■■■□□ 2.01
AUP1-207ENST00000472800 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
AUP1-207ENST00000472800 TULP4Q9NRJ4 1543 aa27.58■■■□□ 2.01
AUP1-207ENST00000472800 ORAI2Q96SN7 254 aa27.58■■■□□ 2.01
AUP1-207ENST00000472800 HSPA5P11021 654 aaKnown RBP27.57■■■□□ 2
AUP1-207ENST00000472800 TMF1P82094 1093 aa27.56■■■□□ 2
AUP1-207ENST00000472800 CCDC61Q9Y6R9 512 aa27.56■■■□□ 2
AUP1-207ENST00000472800 CABP2Q9NPB3 220 aa27.55■■■□□ 2
AUP1-207ENST00000472800 ZNF772Q68DY9 489 aaPredicted RBP27.54■■■□□ 2
AUP1-207ENST00000472800 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
AUP1-207ENST00000472800 CDCA8Q53HL2 280 aa27.53■■■□□ 2
AUP1-207ENST00000472800 PHF8Q9UPP1 1060 aa27.53■■■□□ 2
AUP1-207ENST00000472800 SHPRHQ149N8 1683 aa27.52■■■□□ 2
AUP1-207ENST00000472800 ATP7BP35670 1465 aa27.51■■□□□ 1.99
AUP1-207ENST00000472800 ATAD2Q6PL18 1390 aa27.5■■□□□ 1.99
AUP1-207ENST00000472800 PLEKHG3A1L390 1219 aa27.5■■□□□ 1.99
AUP1-207ENST00000472800 NUTM2BA6NNL0 878 aaPredicted RBP27.5■■□□□ 1.99
AUP1-207ENST00000472800 NUTM2EB1AL46 878 aaPredicted RBP27.5■■□□□ 1.99
AUP1-207ENST00000472800 NUTM2AQ8IVF1 878 aaPredicted RBP27.5■■□□□ 1.99
AUP1-207ENST00000472800 USP32Q8NFA0 1604 aa27.49■■□□□ 1.99
AUP1-207ENST00000472800 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
AUP1-207ENST00000472800 FOXO3O43524 673 aa27.46■■□□□ 1.99
AUP1-207ENST00000472800 PMFBP1Q8TBY8 1022 aa27.45■■□□□ 1.98
AUP1-207ENST00000472800 KIF1AQ12756 1690 aa27.44■■□□□ 1.98
AUP1-207ENST00000472800 NGDNQ8NEJ9 315 aaKnown RBP27.44■■□□□ 1.98
AUP1-207ENST00000472800 RGPD8O14715 1765 aaPredicted RBP27.44■■□□□ 1.98
AUP1-207ENST00000472800 CABP1Q9NZU7 370 aa27.43■■□□□ 1.98
AUP1-207ENST00000472800 PPIP5K1Q6PFW1 1433 aa27.42■■□□□ 1.98
AUP1-207ENST00000472800 ITSN1Q15811 1721 aa27.42■■□□□ 1.98
AUP1-207ENST00000472800 RXRBP28702 533 aa27.42■■□□□ 1.98
AUP1-207ENST00000472800 PSME1Q06323 249 aa27.42■■□□□ 1.98
AUP1-207ENST00000472800 SOS2Q07890 1332 aaPredicted RBP27.41■■□□□ 1.98
AUP1-207ENST00000472800 LRRC59Q96AG4 307 aaKnown RBP27.41■■□□□ 1.98
AUP1-207ENST00000472800 POLR3AO14802 1390 aaPredicted RBP27.4■■□□□ 1.98
AUP1-207ENST00000472800 NINLQ9Y2I6 1382 aa27.39■■□□□ 1.98
AUP1-207ENST00000472800 KRT28Q7Z3Y7 464 aa27.39■■□□□ 1.98
AUP1-207ENST00000472800 DDX17Q92841 729 aaKnown RBP27.39■■□□□ 1.98
AUP1-207ENST00000472800 ZNF692Q9BU19 519 aaPredicted RBP27.39■■□□□ 1.98
AUP1-207ENST00000472800 ACEP12821 1306 aa27.39■■□□□ 1.97
AUP1-207ENST00000472800 NHSL1Q5SYE7 1610 aa27.38■■□□□ 1.97
AUP1-207ENST00000472800 TOPAZ1Q8N9V7 1692 aa27.38■■□□□ 1.97
AUP1-207ENST00000472800 UPF1Q92900 1129 aaKnown RBP eCLIP27.38■■□□□ 1.97
AUP1-207ENST00000472800 AFF2P51816 1311 aa27.38■■□□□ 1.97
AUP1-207ENST00000472800 TMC1Q8TDI8 760 aa27.36■■□□□ 1.97
AUP1-207ENST00000472800 SLC12A5Q9H2X9 1139 aa27.34■■□□□ 1.97
AUP1-207ENST00000472800 BRD4O60885 1362 aaPredicted RBP27.34■■□□□ 1.97
AUP1-207ENST00000472800 PXDNQ92626 1479 aa27.33■■□□□ 1.97
AUP1-207ENST00000472800 TERF2IPQ9NYB0 399 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms