RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SF3B2Q13435 895 aaKnown RBP21.27■■□□□ 1
SMURF1-203ENST00000472627 ROBO2Q9HCK4 1378 aa21.26■□□□□ 0.99
SMURF1-203ENST00000472627 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
SMURF1-203ENST00000472627 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
SMURF1-203ENST00000472627 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
SMURF1-203ENST00000472627 EP400Q96L91 3159 aa21.26■□□□□ 0.99
SMURF1-203ENST00000472627 ITGAEP38570 1179 aa21.25■□□□□ 0.99
SMURF1-203ENST00000472627 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
SMURF1-203ENST00000472627 CLTCL1P53675 1640 aa21.23■□□□□ 0.99
SMURF1-203ENST00000472627 KIF1BO60333 1816 aa21.23■□□□□ 0.99
SMURF1-203ENST00000472627 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
SMURF1-203ENST00000472627 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
SMURF1-203ENST00000472627 UNC5CLQ8IV45 518 aa21.2■□□□□ 0.98
SMURF1-203ENST00000472627 RPGRIP1LQ68CZ1 1315 aa21.2■□□□□ 0.98
SMURF1-203ENST00000472627 PXDNQ92626 1479 aa21.2■□□□□ 0.98
SMURF1-203ENST00000472627 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.19■□□□□ 0.98
SMURF1-203ENST00000472627 FOXO3O43524 673 aa21.18■□□□□ 0.98
SMURF1-203ENST00000472627 RALGAPBQ86X10 1494 aa21.17■□□□□ 0.98
SMURF1-203ENST00000472627 HAP1P54257 671 aaPredicted RBP21.15■□□□□ 0.98
SMURF1-203ENST00000472627 XPCQ01831 940 aaPredicted RBP21.15■□□□□ 0.98
SMURF1-203ENST00000472627 LRP5O75197 1615 aa21.14■□□□□ 0.97
SMURF1-203ENST00000472627 SLIT2O94813 1529 aa21.13■□□□□ 0.97
SMURF1-203ENST00000472627 DEFB132Q7Z7B7 95 aa21.12■□□□□ 0.97
SMURF1-203ENST00000472627 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
SMURF1-203ENST00000472627 GLI3P10071 1580 aa21.11■□□□□ 0.97
SMURF1-203ENST00000472627 NAIPQ13075 1403 aa21.11■□□□□ 0.97
SMURF1-203ENST00000472627 SEPT12Q8IYM1 358 aa21.1■□□□□ 0.97
SMURF1-203ENST00000472627 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
SMURF1-203ENST00000472627 SPATA31A3Q5VYP0 1347 aa21.08■□□□□ 0.97
SMURF1-203ENST00000472627 USP32Q8NFA0 1604 aa21.08■□□□□ 0.97
SMURF1-203ENST00000472627 BAG6P46379 1132 aa21.08■□□□□ 0.97
SMURF1-203ENST00000472627 KIF1AQ12756 1690 aa21.08■□□□□ 0.96
SMURF1-203ENST00000472627 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
SMURF1-203ENST00000472627 VPS72Q15906 364 aa21.07■□□□□ 0.96
SMURF1-203ENST00000472627 KRT27Q7Z3Y8 459 aa21.07■□□□□ 0.96
SMURF1-203ENST00000472627 A0A0G2JS52 829 aa21.05■□□□□ 0.96
SMURF1-203ENST00000472627 MYT1Q01538 1121 aa21.05■□□□□ 0.96
SMURF1-203ENST00000472627 PSME1Q06323 249 aa21.05■□□□□ 0.96
SMURF1-203ENST00000472627 PPLO60437 1756 aa21.05■□□□□ 0.96
SMURF1-203ENST00000472627 STK26Q9P289 416 aa21.04■□□□□ 0.96
SMURF1-203ENST00000472627 TECPR2O15040 1411 aa21.04■□□□□ 0.96
SMURF1-203ENST00000472627 KRT28Q7Z3Y7 464 aa21.03■□□□□ 0.96
SMURF1-203ENST00000472627 BRWD3Q6RI45 1802 aa21.03■□□□□ 0.96
SMURF1-203ENST00000472627 TNS3Q68CZ2 1445 aa21.02■□□□□ 0.96
SMURF1-203ENST00000472627 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
SMURF1-203ENST00000472627 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
SMURF1-203ENST00000472627 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
SMURF1-203ENST00000472627 NWD2Q9ULI1 1742 aa21.01■□□□□ 0.95
SMURF1-203ENST00000472627 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
SMURF1-203ENST00000472627 ARHGEF10O15013 1369 aa20.99■□□□□ 0.95
SMURF1-203ENST00000472627 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
SMURF1-203ENST00000472627 RRBP1Q9P2E9 1410 aaKnown RBP20.99■□□□□ 0.95
SMURF1-203ENST00000472627 HRCP23327 699 aa20.99■□□□□ 0.95
SMURF1-203ENST00000472627 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
SMURF1-203ENST00000472627 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
SMURF1-203ENST00000472627 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
SMURF1-203ENST00000472627 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
SMURF1-203ENST00000472627 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
SMURF1-203ENST00000472627 KNDC1Q76NI1 1749 aa20.96■□□□□ 0.95
SMURF1-203ENST00000472627 SBNO1A3KN83 1393 aa20.96■□□□□ 0.95
SMURF1-203ENST00000472627 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
SMURF1-203ENST00000472627 PLEKHG5O94827 1062 aa20.94■□□□□ 0.94
SMURF1-203ENST00000472627 CABLES1Q8TDN4 633 aa20.94■□□□□ 0.94
SMURF1-203ENST00000472627 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
SMURF1-203ENST00000472627 FAM98CQ17RN3 349 aaKnown RBP20.92■□□□□ 0.94
SMURF1-203ENST00000472627 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
SMURF1-203ENST00000472627 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
SMURF1-203ENST00000472627 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
SMURF1-203ENST00000472627 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
SMURF1-203ENST00000472627 RGPD1P0DJD0 1748 aa20.9■□□□□ 0.94
SMURF1-203ENST00000472627 NRXN1Q9ULB1 1477 aa20.89■□□□□ 0.94
SMURF1-203ENST00000472627 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
SMURF1-203ENST00000472627 PIK3C2GO75747 1445 aa20.88■□□□□ 0.93
SMURF1-203ENST00000472627 IFT172Q9UG01 1749 aa20.88■□□□□ 0.93
SMURF1-203ENST00000472627 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
SMURF1-203ENST00000472627 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
SMURF1-203ENST00000472627 BTG4Q9NY30 223 aa20.88■□□□□ 0.93
SMURF1-203ENST00000472627 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
SMURF1-203ENST00000472627 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
SMURF1-203ENST00000472627 DISP2A7MBM2 1401 aa20.86■□□□□ 0.93
SMURF1-203ENST00000472627 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
SMURF1-203ENST00000472627 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
SMURF1-203ENST00000472627 SPATA31E1Q6ZUB1 1445 aa20.84■□□□□ 0.93
SMURF1-203ENST00000472627 ANKARQ7Z5J8 1434 aa20.84■□□□□ 0.93
SMURF1-203ENST00000472627 GPRASP1Q5JY77 1395 aa20.84■□□□□ 0.93
SMURF1-203ENST00000472627 COL14A1Q05707 1796 aaKnown RBP20.83■□□□□ 0.93
SMURF1-203ENST00000472627 NRAPQ86VF7 1730 aa20.83■□□□□ 0.92
SMURF1-203ENST00000472627 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
SMURF1-203ENST00000472627 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
SMURF1-203ENST00000472627 RGPD8O14715 1765 aaPredicted RBP20.81■□□□□ 0.92
SMURF1-203ENST00000472627 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
SMURF1-203ENST00000472627 SPATA31A5Q5VU36 1347 aa20.8■□□□□ 0.92
SMURF1-203ENST00000472627 SPATA31A7Q8IWB4 1347 aa20.8■□□□□ 0.92
SMURF1-203ENST00000472627 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
SMURF1-203ENST00000472627 POGKQ9P215 609 aa20.8■□□□□ 0.92
SMURF1-203ENST00000472627 YY1P25490 414 aa20.79■□□□□ 0.92
SMURF1-203ENST00000472627 PRAM1Q96QH2 718 aa20.79■□□□□ 0.92
SMURF1-203ENST00000472627 C14orf93Q9H972 538 aaKnown RBP20.79■□□□□ 0.92
SMURF1-203ENST00000472627 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMURF1-203ENST00000472627 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms