RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 PRAG1Q86YV5 1406 aa21.32■■□□□ 1
ABCF3-209ENST00000472608 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
ABCF3-209ENST00000472608 NEXMIFQ5QGS0 1516 aa21.3■■□□□ 1
ABCF3-209ENST00000472608 ROBO2Q9HCK4 1378 aa21.29■■□□□ 1
ABCF3-209ENST00000472608 GJD4Q96KN9 370 aaPredicted RBP21.29■■□□□ 1
ABCF3-209ENST00000472608 SPHKAPQ2M3C7 1700 aa21.27■■□□□ 1
ABCF3-209ENST00000472608 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-209ENST00000472608 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
ABCF3-209ENST00000472608 PXDNQ92626 1479 aa21.23■□□□□ 0.99
ABCF3-209ENST00000472608 HRCP23327 699 aa21.22■□□□□ 0.99
ABCF3-209ENST00000472608 MARF1Q9Y4F3 1742 aaKnown RBP21.21■□□□□ 0.99
ABCF3-209ENST00000472608 CLTCL1P53675 1640 aa21.2■□□□□ 0.98
ABCF3-209ENST00000472608 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.2■□□□□ 0.98
ABCF3-209ENST00000472608 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
ABCF3-209ENST00000472608 UNC5CLQ8IV45 518 aa21.19■□□□□ 0.98
ABCF3-209ENST00000472608 RALGAPBQ86X10 1494 aa21.19■□□□□ 0.98
ABCF3-209ENST00000472608 SLIT2O94813 1529 aa21.19■□□□□ 0.98
ABCF3-209ENST00000472608 GLI3P10071 1580 aa21.18■□□□□ 0.98
ABCF3-209ENST00000472608 LRP5O75197 1615 aa21.18■□□□□ 0.98
ABCF3-209ENST00000472608 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
ABCF3-209ENST00000472608 DEFB132Q7Z7B7 95 aa21.17■□□□□ 0.98
ABCF3-209ENST00000472608 CDC42BPGQ6DT37 1551 aa21.16■□□□□ 0.98
ABCF3-209ENST00000472608 RAB3GAP2Q9H2M9 1393 aa21.15■□□□□ 0.98
ABCF3-209ENST00000472608 FOXO3O43524 673 aa21.15■□□□□ 0.98
ABCF3-209ENST00000472608 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.98
ABCF3-209ENST00000472608 SLC4A1APQ9BWU0 796 aaKnown RBP21.14■□□□□ 0.97
ABCF3-209ENST00000472608 RPGRIP1LQ68CZ1 1315 aa21.13■□□□□ 0.97
ABCF3-209ENST00000472608 ONECUT3O60422 494 aaPredicted RBP21.13■□□□□ 0.97
ABCF3-209ENST00000472608 TRIM26Q12899 539 aaPredicted RBP21.12■□□□□ 0.97
ABCF3-209ENST00000472608 KIF1BO60333 1816 aa21.11■□□□□ 0.97
ABCF3-209ENST00000472608 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
ABCF3-209ENST00000472608 SPATA31A3Q5VYP0 1347 aa21.1■□□□□ 0.97
ABCF3-209ENST00000472608 SF3B2Q13435 895 aaKnown RBP21.1■□□□□ 0.97
ABCF3-209ENST00000472608 SEPT12Q8IYM1 358 aa21.1■□□□□ 0.97
ABCF3-209ENST00000472608 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
ABCF3-209ENST00000472608 BRWD3Q6RI45 1802 aa21.09■□□□□ 0.97
ABCF3-209ENST00000472608 VPS72Q15906 364 aa21.09■□□□□ 0.97
ABCF3-209ENST00000472608 TECPR2O15040 1411 aa21.05■□□□□ 0.96
ABCF3-209ENST00000472608 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
ABCF3-209ENST00000472608 KRT27Q7Z3Y8 459 aa21.04■□□□□ 0.96
ABCF3-209ENST00000472608 CCDC144AA2RUR9 1427 aa21.03■□□□□ 0.96
ABCF3-209ENST00000472608 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
ABCF3-209ENST00000472608 PPLO60437 1756 aa21■□□□□ 0.95
ABCF3-209ENST00000472608 ABCC11Q96J66 1382 aa21■□□□□ 0.95
ABCF3-209ENST00000472608 BAG6P46379 1132 aa21■□□□□ 0.95
ABCF3-209ENST00000472608 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
ABCF3-209ENST00000472608 NUTM2FA1L443 756 aa20.99■□□□□ 0.95
ABCF3-209ENST00000472608 PSDA5PKW4 1024 aaPredicted RBP20.99■□□□□ 0.95
ABCF3-209ENST00000472608 NWD2Q9ULI1 1742 aa20.98■□□□□ 0.95
ABCF3-209ENST00000472608 KIF1AQ12756 1690 aa20.98■□□□□ 0.95
ABCF3-209ENST00000472608 TNS3Q68CZ2 1445 aa20.96■□□□□ 0.95
ABCF3-209ENST00000472608 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
ABCF3-209ENST00000472608 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
ABCF3-209ENST00000472608 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
ABCF3-209ENST00000472608 CABLES1Q8TDN4 633 aa20.94■□□□□ 0.94
ABCF3-209ENST00000472608 STK26Q9P289 416 aa20.94■□□□□ 0.94
ABCF3-209ENST00000472608 SBNO1A3KN83 1393 aa20.94■□□□□ 0.94
ABCF3-209ENST00000472608 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
ABCF3-209ENST00000472608 PSME1Q06323 249 aa20.93■□□□□ 0.94
ABCF3-209ENST00000472608 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
ABCF3-209ENST00000472608 FAM83GA6ND36 823 aa20.92■□□□□ 0.94
ABCF3-209ENST00000472608 HAP1P54257 671 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-209ENST00000472608 CCDC9Q9Y3X0 531 aaKnown RBP20.92■□□□□ 0.94
ABCF3-209ENST00000472608 DISP2A7MBM2 1401 aa20.92■□□□□ 0.94
ABCF3-209ENST00000472608 KNDC1Q76NI1 1749 aa20.92■□□□□ 0.94
ABCF3-209ENST00000472608 PHF8Q9UPP1 1060 aa20.91■□□□□ 0.94
ABCF3-209ENST00000472608 ARHGEF10O15013 1369 aa20.9■□□□□ 0.94
ABCF3-209ENST00000472608 EN1Q05925 392 aaPredicted RBP20.9■□□□□ 0.94
ABCF3-209ENST00000472608 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
ABCF3-209ENST00000472608 ABCA3Q99758 1704 aa20.88■□□□□ 0.93
ABCF3-209ENST00000472608 FAM98CQ17RN3 349 aaKnown RBP20.88■□□□□ 0.93
ABCF3-209ENST00000472608 TMEM132EQ6IEE7 984 aa20.88■□□□□ 0.93
ABCF3-209ENST00000472608 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
ABCF3-209ENST00000472608 R3HDM1Q15032 1099 aaKnown RBP20.87■□□□□ 0.93
ABCF3-209ENST00000472608 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
ABCF3-209ENST00000472608 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
ABCF3-209ENST00000472608 NRAPQ86VF7 1730 aa20.86■□□□□ 0.93
ABCF3-209ENST00000472608 SPATA31E1Q6ZUB1 1445 aa20.86■□□□□ 0.93
ABCF3-209ENST00000472608 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
ABCF3-209ENST00000472608 A0A0G2JS52 829 aa20.83■□□□□ 0.93
ABCF3-209ENST00000472608 MYT1Q01538 1121 aa20.83■□□□□ 0.93
ABCF3-209ENST00000472608 BTG4Q9NY30 223 aa20.83■□□□□ 0.93
ABCF3-209ENST00000472608 RGPD8O14715 1765 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-209ENST00000472608 SPATA31A5Q5VU36 1347 aa20.82■□□□□ 0.92
ABCF3-209ENST00000472608 SPATA31A7Q8IWB4 1347 aa20.82■□□□□ 0.92
ABCF3-209ENST00000472608 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
ABCF3-209ENST00000472608 IFT172Q9UG01 1749 aa20.81■□□□□ 0.92
ABCF3-209ENST00000472608 EZH2Q15910 746 aaKnown RBP20.8■□□□□ 0.92
ABCF3-209ENST00000472608 FAM182BQ5T319 152 aa20.8■□□□□ 0.92
ABCF3-209ENST00000472608 LMOD2Q6P5Q4 547 aa20.8■□□□□ 0.92
ABCF3-209ENST00000472608 TNS1Q9HBL0 1735 aaKnown RBP20.79■□□□□ 0.92
ABCF3-209ENST00000472608 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
ABCF3-209ENST00000472608 THSD7AQ9UPZ6 1657 aa20.79■□□□□ 0.92
ABCF3-209ENST00000472608 COL14A1Q05707 1796 aaKnown RBP20.78■□□□□ 0.92
ABCF3-209ENST00000472608 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
ABCF3-209ENST00000472608 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
ABCF3-209ENST00000472608 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
ABCF3-209ENST00000472608 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
ABCF3-209ENST00000472608 YY1P25490 414 aa20.76■□□□□ 0.91
ABCF3-209ENST00000472608 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms