RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 SOS2Q07890 1332 aaPredicted RBP28.39■■■□□ 2.13
RHBDF1-207ENST00000472390 PLEKHH1Q9ULM0 1364 aa28.38■■■□□ 2.13
RHBDF1-207ENST00000472390 NUTM2FA1L443 756 aa28.37■■■□□ 2.13
RHBDF1-207ENST00000472390 CDK12Q9NYV4 1490 aaPredicted RBP28.36■■■□□ 2.13
RHBDF1-207ENST00000472390 XPCQ01831 940 aaPredicted RBP28.36■■■□□ 2.13
RHBDF1-207ENST00000472390 TMEM132EQ6IEE7 984 aa28.36■■■□□ 2.13
RHBDF1-207ENST00000472390 WAPLQ7Z5K2 1190 aa28.36■■■□□ 2.13
RHBDF1-207ENST00000472390 MPHOSPH9Q99550 1183 aa28.36■■■□□ 2.13
RHBDF1-207ENST00000472390 KNDC1Q76NI1 1749 aa28.35■■■□□ 2.13
RHBDF1-207ENST00000472390 COL22A1Q8NFW1 1626 aaPredicted RBP28.33■■■□□ 2.13
RHBDF1-207ENST00000472390 PXDNQ92626 1479 aa28.33■■■□□ 2.13
RHBDF1-207ENST00000472390 QTRT2Q9H974 415 aaKnown RBP28.32■■■□□ 2.12
RHBDF1-207ENST00000472390 ESCO1Q5FWF5 840 aa28.31■■■□□ 2.12
RHBDF1-207ENST00000472390 NGLY1Q96IV0 654 aa28.31■■■□□ 2.12
RHBDF1-207ENST00000472390 TECPR2O15040 1411 aa28.31■■■□□ 2.12
RHBDF1-207ENST00000472390 PIK3C2GO75747 1445 aa28.31■■■□□ 2.12
RHBDF1-207ENST00000472390 LRPPRCP42704 1394 aaKnown RBP28.3■■■□□ 2.12
RHBDF1-207ENST00000472390 FMN2Q9NZ56 1722 aa28.29■■■□□ 2.12
RHBDF1-207ENST00000472390 MYOM2P54296 1465 aa28.27■■■□□ 2.12
RHBDF1-207ENST00000472390 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.12
RHBDF1-207ENST00000472390 RBM6P78332 1123 aaKnown RBP28.26■■■□□ 2.11
RHBDF1-207ENST00000472390 FOXO3O43524 673 aa28.25■■■□□ 2.11
RHBDF1-207ENST00000472390 MARF1Q9Y4F3 1742 aaKnown RBP28.25■■■□□ 2.11
RHBDF1-207ENST00000472390 YTHDC2Q9H6S0 1430 aaKnown RBP28.25■■■□□ 2.11
RHBDF1-207ENST00000472390 RGPD8O14715 1765 aaPredicted RBP28.24■■■□□ 2.11
RHBDF1-207ENST00000472390 USP21Q9UK80 565 aa28.22■■■□□ 2.11
RHBDF1-207ENST00000472390 ABCC11Q96J66 1382 aa28.22■■■□□ 2.11
RHBDF1-207ENST00000472390 NPHP3Q7Z494 1330 aa28.21■■■□□ 2.11
RHBDF1-207ENST00000472390 ATRNO75882 1429 aa28.18■■■□□ 2.1
RHBDF1-207ENST00000472390 NRXN1Q9ULB1 1477 aa28.17■■■□□ 2.1
RHBDF1-207ENST00000472390 CFAP70Q5T0N1 1121 aa28.17■■■□□ 2.1
RHBDF1-207ENST00000472390 KIF1AQ12756 1690 aa28.16■■■□□ 2.1
RHBDF1-207ENST00000472390 SAFB2Q14151 953 aaKnown RBP eCLIP28.15■■■□□ 2.1
RHBDF1-207ENST00000472390 FNBP4Q8N3X1 1017 aaPredicted RBP28.15■■■□□ 2.1
RHBDF1-207ENST00000472390 BCL9LQ86UU0 1499 aa28.15■■■□□ 2.1
RHBDF1-207ENST00000472390 RAB3GAP2Q9H2M9 1393 aa28.14■■■□□ 2.1
RHBDF1-207ENST00000472390 PLEKHG5O94827 1062 aa28.13■■■□□ 2.09
RHBDF1-207ENST00000472390 TRPC5Q9UL62 973 aaPredicted RBP28.12■■■□□ 2.09
RHBDF1-207ENST00000472390 C14orf93Q9H972 538 aaKnown RBP28.11■■■□□ 2.09
RHBDF1-207ENST00000472390 USP32Q8NFA0 1604 aa28.1■■■□□ 2.09
RHBDF1-207ENST00000472390 ABCA3Q99758 1704 aa28.08■■■□□ 2.09
RHBDF1-207ENST00000472390 SPATA31A3Q5VYP0 1347 aa28.08■■■□□ 2.09
RHBDF1-207ENST00000472390 PRAM1Q96QH2 718 aa28.07■■■□□ 2.08
RHBDF1-207ENST00000472390 GLI3P10071 1580 aa28.07■■■□□ 2.08
RHBDF1-207ENST00000472390 ADGRB1O14514 1584 aa28.06■■■□□ 2.08
RHBDF1-207ENST00000472390 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.06■■■□□ 2.08
RHBDF1-207ENST00000472390 ATAD2Q6PL18 1390 aa28.05■■■□□ 2.08
RHBDF1-207ENST00000472390 KRT28Q7Z3Y7 464 aa28.05■■■□□ 2.08
RHBDF1-207ENST00000472390 EP400Q96L91 3159 aa28.04■■■□□ 2.08
RHBDF1-207ENST00000472390 CABLES1Q8TDN4 633 aa28.04■■■□□ 2.08
RHBDF1-207ENST00000472390 DHX57Q6P158 1386 aaKnown RBP28.03■■■□□ 2.08
RHBDF1-207ENST00000472390 TNS3Q68CZ2 1445 aa28.02■■■□□ 2.08
RHBDF1-207ENST00000472390 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
RHBDF1-207ENST00000472390 PLCH1Q4KWH8 1693 aa28.02■■■□□ 2.08
RHBDF1-207ENST00000472390 SLIT2O94813 1529 aa28.02■■■□□ 2.08
RHBDF1-207ENST00000472390 DLC1Q96QB1 1528 aa28■■■□□ 2.07
RHBDF1-207ENST00000472390 RALGAPBQ86X10 1494 aa28■■■□□ 2.07
RHBDF1-207ENST00000472390 BRWD3Q6RI45 1802 aa27.99■■■□□ 2.07
RHBDF1-207ENST00000472390 ADGRB2O60241 1585 aa27.99■■■□□ 2.07
RHBDF1-207ENST00000472390 HIRIP3Q9BW71 556 aaPredicted RBP27.99■■■□□ 2.07
RHBDF1-207ENST00000472390 PMFBP1Q8TBY8 1022 aa27.98■■■□□ 2.07
RHBDF1-207ENST00000472390 SIRT1Q96EB6 747 aa27.98■■■□□ 2.07
RHBDF1-207ENST00000472390 GJD4Q96KN9 370 aaPredicted RBP27.97■■■□□ 2.07
RHBDF1-207ENST00000472390 TRPM3Q9HCF6 1732 aaPredicted RBP27.96■■■□□ 2.07
RHBDF1-207ENST00000472390 TRAK1Q9UPV9 953 aa27.96■■■□□ 2.07
RHBDF1-207ENST00000472390 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
RHBDF1-207ENST00000472390 LMOD2Q6P5Q4 547 aa27.95■■■□□ 2.06
RHBDF1-207ENST00000472390 POGKQ9P215 609 aa27.95■■■□□ 2.06
RHBDF1-207ENST00000472390 MINK1Q8N4C8 1332 aaPredicted RBP27.93■■■□□ 2.06
RHBDF1-207ENST00000472390 PRR36Q9H6K5 1346 aa27.93■■■□□ 2.06
RHBDF1-207ENST00000472390 UNC5CLQ8IV45 518 aa27.93■■■□□ 2.06
RHBDF1-207ENST00000472390 HAP1P54257 671 aaPredicted RBP27.91■■■□□ 2.06
RHBDF1-207ENST00000472390 ANKARQ7Z5J8 1434 aa27.9■■■□□ 2.06
RHBDF1-207ENST00000472390 ARHGEF28Q8N1W1 1705 aaKnown RBP27.89■■■□□ 2.06
RHBDF1-207ENST00000472390 SBNO1A3KN83 1393 aa27.89■■■□□ 2.06
RHBDF1-207ENST00000472390 ALS2Q96Q42 1657 aa27.89■■■□□ 2.06
RHBDF1-207ENST00000472390 DCAF11Q8TEB1 546 aa27.89■■■□□ 2.06
RHBDF1-207ENST00000472390 NRAPQ86VF7 1730 aa27.88■■■□□ 2.05
RHBDF1-207ENST00000472390 NWD2Q9ULI1 1742 aa27.88■■■□□ 2.05
RHBDF1-207ENST00000472390 PSME1Q06323 249 aa27.87■■■□□ 2.05
RHBDF1-207ENST00000472390 TULP4Q9NRJ4 1543 aa27.87■■■□□ 2.05
RHBDF1-207ENST00000472390 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
RHBDF1-207ENST00000472390 CRYBG1Q9Y4K1 1723 aa27.85■■■□□ 2.05
RHBDF1-207ENST00000472390 ARHGEF10O15013 1369 aa27.83■■■□□ 2.05
RHBDF1-207ENST00000472390 CCDC9Q9Y3X0 531 aaKnown RBP27.82■■■□□ 2.04
RHBDF1-207ENST00000472390 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
RHBDF1-207ENST00000472390 FAM83GA6ND36 823 aa27.8■■■□□ 2.04
RHBDF1-207ENST00000472390 SEPT12Q8IYM1 358 aa27.8■■■□□ 2.04
RHBDF1-207ENST00000472390 VPS72Q15906 364 aa27.79■■■□□ 2.04
RHBDF1-207ENST00000472390 ATP7BP35670 1465 aa27.78■■■□□ 2.04
RHBDF1-207ENST00000472390 WASLO00401 505 aaPredicted RBP27.78■■■□□ 2.04
RHBDF1-207ENST00000472390 DEFB132Q7Z7B7 95 aa27.77■■■□□ 2.04
RHBDF1-207ENST00000472390 COL14A1Q05707 1796 aaKnown RBP27.75■■■□□ 2.03
RHBDF1-207ENST00000472390 ITSN1Q15811 1721 aa27.75■■■□□ 2.03
RHBDF1-207ENST00000472390 BLMP54132 1417 aaPredicted RBP27.75■■■□□ 2.03
RHBDF1-207ENST00000472390 GPRASP1Q5JY77 1395 aa27.73■■■□□ 2.03
RHBDF1-207ENST00000472390 TOPAZ1Q8N9V7 1692 aa27.72■■■□□ 2.03
RHBDF1-207ENST00000472390 BTG4Q9NY30 223 aa27.72■■■□□ 2.03
RHBDF1-207ENST00000472390 ZRANB1Q9UGI0 708 aa27.72■■■□□ 2.03
RHBDF1-207ENST00000472390 PHRF1Q9P1Y6 1649 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms