RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
SEC16A-209ENST00000472305 POGKQ9P215 609 aa18.25■□□□□ 0.51
SEC16A-209ENST00000472305 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SEC16A-209ENST00000472305 KNDC1Q76NI1 1749 aa18.23■□□□□ 0.51
SEC16A-209ENST00000472305 C14orf37Q86TY3 774 aa18.22■□□□□ 0.51
SEC16A-209ENST00000472305 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
SEC16A-209ENST00000472305 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
SEC16A-209ENST00000472305 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
SEC16A-209ENST00000472305 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
SEC16A-209ENST00000472305 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
SEC16A-209ENST00000472305 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
SEC16A-209ENST00000472305 USP47Q96K76 1375 aa18.19■□□□□ 0.5
SEC16A-209ENST00000472305 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
SEC16A-209ENST00000472305 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
SEC16A-209ENST00000472305 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
SEC16A-209ENST00000472305 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
SEC16A-209ENST00000472305 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
SEC16A-209ENST00000472305 HSPA5P11021 654 aaKnown RBP18.16■□□□□ 0.5
SEC16A-209ENST00000472305 MSH6P52701 1360 aa18.16■□□□□ 0.5
SEC16A-209ENST00000472305 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
SEC16A-209ENST00000472305 NALCNQ8IZF0 1738 aa18.15■□□□□ 0.5
SEC16A-209ENST00000472305 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
SEC16A-209ENST00000472305 TESK2Q96S53 571 aa18.14■□□□□ 0.49
SEC16A-209ENST00000472305 WASLO00401 505 aaPredicted RBP18.12■□□□□ 0.49
SEC16A-209ENST00000472305 ATF3P18847 181 aa18.12■□□□□ 0.49
SEC16A-209ENST00000472305 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
SEC16A-209ENST00000472305 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
SEC16A-209ENST00000472305 RGS17Q9UGC6 210 aaPredicted RBP18.12■□□□□ 0.49
SEC16A-209ENST00000472305 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
SEC16A-209ENST00000472305 CABP2Q9NPB3 220 aa18.1■□□□□ 0.49
SEC16A-209ENST00000472305 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
SEC16A-209ENST00000472305 PRR36Q9H6K5 1346 aa18.09■□□□□ 0.49
SEC16A-209ENST00000472305 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.49
SEC16A-209ENST00000472305 MST1RQ04912 1400 aa18.08■□□□□ 0.49
SEC16A-209ENST00000472305 SLAIN2Q9P270 581 aa18.08■□□□□ 0.48
SEC16A-209ENST00000472305 DCCP43146 1447 aa18.07■□□□□ 0.48
SEC16A-209ENST00000472305 ADGRB2O60241 1585 aa18.07■□□□□ 0.48
SEC16A-209ENST00000472305 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
SEC16A-209ENST00000472305 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
SEC16A-209ENST00000472305 ORAI2Q96SN7 254 aa18.06■□□□□ 0.48
SEC16A-209ENST00000472305 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
SEC16A-209ENST00000472305 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
SEC16A-209ENST00000472305 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
SEC16A-209ENST00000472305 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
SEC16A-209ENST00000472305 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
SEC16A-209ENST00000472305 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
SEC16A-209ENST00000472305 ESCO1Q5FWF5 840 aa18.02■□□□□ 0.48
SEC16A-209ENST00000472305 BRINP3Q76B58 766 aa18.02■□□□□ 0.48
SEC16A-209ENST00000472305 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
SEC16A-209ENST00000472305 TMF1P82094 1093 aa18.01■□□□□ 0.47
SEC16A-209ENST00000472305 DDX17Q92841 729 aaKnown RBP18.01■□□□□ 0.47
SEC16A-209ENST00000472305 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
SEC16A-209ENST00000472305 ATP7BP35670 1465 aa18■□□□□ 0.47
SEC16A-209ENST00000472305 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
SEC16A-209ENST00000472305 ANKARQ7Z5J8 1434 aa17.98■□□□□ 0.47
SEC16A-209ENST00000472305 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
SEC16A-209ENST00000472305 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
SEC16A-209ENST00000472305 CABP1Q9NZU7 370 aa17.97■□□□□ 0.47
SEC16A-209ENST00000472305 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
SEC16A-209ENST00000472305 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
SEC16A-209ENST00000472305 FOXO3O43524 673 aa17.95■□□□□ 0.46
SEC16A-209ENST00000472305 PPIP5K1Q6PFW1 1433 aa17.95■□□□□ 0.46
SEC16A-209ENST00000472305 ROBO1Q9Y6N7 1651 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
SEC16A-209ENST00000472305 TMC1Q8TDI8 760 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
SEC16A-209ENST00000472305 SLC12A5Q9H2X9 1139 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 KIF7Q2M1P5 1343 aa17.94■□□□□ 0.46
SEC16A-209ENST00000472305 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
SEC16A-209ENST00000472305 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
SEC16A-209ENST00000472305 ACEP12821 1306 aa17.92■□□□□ 0.46
SEC16A-209ENST00000472305 NGDNQ8NEJ9 315 aaKnown RBP17.91■□□□□ 0.46
SEC16A-209ENST00000472305 WASHC2AQ641Q2 1341 aa17.91■□□□□ 0.46
SEC16A-209ENST00000472305 TOPAZ1Q8N9V7 1692 aa17.9■□□□□ 0.46
SEC16A-209ENST00000472305 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
SEC16A-209ENST00000472305 CCDC7Q96M83 1385 aa17.89■□□□□ 0.45
SEC16A-209ENST00000472305 KRT28Q7Z3Y7 464 aa17.88■□□□□ 0.45
SEC16A-209ENST00000472305 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
SEC16A-209ENST00000472305 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
SEC16A-209ENST00000472305 PSME1Q06323 249 aa17.87■□□□□ 0.45
SEC16A-209ENST00000472305 SOS2Q07890 1332 aaPredicted RBP17.87■□□□□ 0.45
SEC16A-209ENST00000472305 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
SEC16A-209ENST00000472305 KIF1AQ12756 1690 aa17.84■□□□□ 0.45
SEC16A-209ENST00000472305 NHSL1Q5SYE7 1610 aa17.84■□□□□ 0.45
SEC16A-209ENST00000472305 AHDC1Q5TGY3 1603 aaPredicted RBP17.84■□□□□ 0.45
SEC16A-209ENST00000472305 PXDNQ92626 1479 aa17.84■□□□□ 0.45
SEC16A-209ENST00000472305 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
SEC16A-209ENST00000472305 A0A1W2PP64 1363 aa17.84■□□□□ 0.45
SEC16A-209ENST00000472305 ITSN1Q15811 1721 aa17.84■□□□□ 0.45
SEC16A-209ENST00000472305 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
SEC16A-209ENST00000472305 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
SEC16A-209ENST00000472305 PANK3Q9H999 370 aa17.82■□□□□ 0.44
SEC16A-209ENST00000472305 MYOM1P52179 1685 aa17.81■□□□□ 0.44
SEC16A-209ENST00000472305 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
SEC16A-209ENST00000472305 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
SEC16A-209ENST00000472305 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
SEC16A-209ENST00000472305 USP6P35125 1406 aa17.81■□□□□ 0.44
SEC16A-209ENST00000472305 SSH2Q76I76 1423 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms