RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 ATF3P18847 181 aa17.5■□□□□ 0.39
PRKCB-205ENST00000472066 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
PRKCB-205ENST00000472066 FBXO41Q8TF61 875 aa17.47■□□□□ 0.39
PRKCB-205ENST00000472066 SLAIN2Q9P270 581 aa17.47■□□□□ 0.39
PRKCB-205ENST00000472066 DCCP43146 1447 aa17.47■□□□□ 0.39
PRKCB-205ENST00000472066 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.38
PRKCB-205ENST00000472066 CENPJQ9HC77 1338 aaPredicted RBP17.46■□□□□ 0.38
PRKCB-205ENST00000472066 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
PRKCB-205ENST00000472066 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
PRKCB-205ENST00000472066 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
PRKCB-205ENST00000472066 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
PRKCB-205ENST00000472066 NALCNQ8IZF0 1738 aa17.43■□□□□ 0.38
PRKCB-205ENST00000472066 ARHGEF28Q8N1W1 1705 aaKnown RBP17.42■□□□□ 0.38
PRKCB-205ENST00000472066 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
PRKCB-205ENST00000472066 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
PRKCB-205ENST00000472066 MST1RQ04912 1400 aa17.4■□□□□ 0.38
PRKCB-205ENST00000472066 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
PRKCB-205ENST00000472066 NUTM2FA1L443 756 aa17.39■□□□□ 0.37
PRKCB-205ENST00000472066 CDK19Q9BWU1 502 aa17.39■□□□□ 0.37
PRKCB-205ENST00000472066 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
PRKCB-205ENST00000472066 USP47Q96K76 1375 aa17.39■□□□□ 0.37
PRKCB-205ENST00000472066 C1orf167Q5SNV9 1468 aa17.38■□□□□ 0.37
PRKCB-205ENST00000472066 ADGRB2O60241 1585 aa17.36■□□□□ 0.37
PRKCB-205ENST00000472066 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
PRKCB-205ENST00000472066 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
PRKCB-205ENST00000472066 ESCO1Q5FWF5 840 aa17.35■□□□□ 0.37
PRKCB-205ENST00000472066 TESK2Q96S53 571 aa17.35■□□□□ 0.37
PRKCB-205ENST00000472066 EIF4G2P78344 907 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRKCB-205ENST00000472066 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
PRKCB-205ENST00000472066 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
PRKCB-205ENST00000472066 SBNO2Q9Y2G9 1366 aa17.34■□□□□ 0.37
PRKCB-205ENST00000472066 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
PRKCB-205ENST00000472066 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
PRKCB-205ENST00000472066 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.36
PRKCB-205ENST00000472066 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.36
PRKCB-205ENST00000472066 CABP2Q9NPB3 220 aa17.33■□□□□ 0.36
PRKCB-205ENST00000472066 ANKARQ7Z5J8 1434 aa17.32■□□□□ 0.36
PRKCB-205ENST00000472066 HSPA5P11021 654 aaKnown RBP17.32■□□□□ 0.36
PRKCB-205ENST00000472066 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
PRKCB-205ENST00000472066 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
PRKCB-205ENST00000472066 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
PRKCB-205ENST00000472066 HSPA1LP34931 641 aa17.3■□□□□ 0.36
PRKCB-205ENST00000472066 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
PRKCB-205ENST00000472066 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
PRKCB-205ENST00000472066 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
PRKCB-205ENST00000472066 CCDC61Q9Y6R9 512 aa17.29■□□□□ 0.36
PRKCB-205ENST00000472066 TMF1P82094 1093 aa17.28■□□□□ 0.36
PRKCB-205ENST00000472066 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
PRKCB-205ENST00000472066 DDX17Q92841 729 aaKnown RBP17.28■□□□□ 0.36
PRKCB-205ENST00000472066 FOXO3O43524 673 aa17.27■□□□□ 0.36
PRKCB-205ENST00000472066 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
PRKCB-205ENST00000472066 ATP7BP35670 1465 aa17.26■□□□□ 0.35
PRKCB-205ENST00000472066 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
PRKCB-205ENST00000472066 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
PRKCB-205ENST00000472066 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
PRKCB-205ENST00000472066 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
PRKCB-205ENST00000472066 DISP3Q9P2K9 1392 aa17.24■□□□□ 0.35
PRKCB-205ENST00000472066 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
PRKCB-205ENST00000472066 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
PRKCB-205ENST00000472066 SOS2Q07890 1332 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-205ENST00000472066 PPIP5K1Q6PFW1 1433 aa17.22■□□□□ 0.35
PRKCB-205ENST00000472066 AHDC1Q5TGY3 1603 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-205ENST00000472066 PSME1Q06323 249 aa17.22■□□□□ 0.35
PRKCB-205ENST00000472066 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
PRKCB-205ENST00000472066 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
PRKCB-205ENST00000472066 ACEP12821 1306 aa17.21■□□□□ 0.35
PRKCB-205ENST00000472066 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
PRKCB-205ENST00000472066 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
PRKCB-205ENST00000472066 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-205ENST00000472066 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
PRKCB-205ENST00000472066 RGPD8O14715 1765 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-205ENST00000472066 KIF1AQ12756 1690 aa17.18■□□□□ 0.34
PRKCB-205ENST00000472066 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
PRKCB-205ENST00000472066 PXDNQ92626 1479 aa17.18■□□□□ 0.34
PRKCB-205ENST00000472066 NHSL1Q5SYE7 1610 aa17.18■□□□□ 0.34
PRKCB-205ENST00000472066 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
PRKCB-205ENST00000472066 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
PRKCB-205ENST00000472066 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
PRKCB-205ENST00000472066 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
PRKCB-205ENST00000472066 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
PRKCB-205ENST00000472066 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 JCADQ9P266 1359 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
PRKCB-205ENST00000472066 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-205ENST00000472066 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-205ENST00000472066 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
PRKCB-205ENST00000472066 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
PRKCB-205ENST00000472066 CD163L1Q9NR16 1453 aa17.11■□□□□ 0.33
PRKCB-205ENST00000472066 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
PRKCB-205ENST00000472066 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
PRKCB-205ENST00000472066 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
PRKCB-205ENST00000472066 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
PRKCB-205ENST00000472066 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
PRKCB-205ENST00000472066 USP6P35125 1406 aa17.1■□□□□ 0.33
PRKCB-205ENST00000472066 TNS3Q68CZ2 1445 aa17.09■□□□□ 0.33
PRKCB-205ENST00000472066 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
PRKCB-205ENST00000472066 A0A1W2PP64 1363 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms