RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
GREB1-209ENST00000472040 ZNF335Q9H4Z2 1342 aaPredicted RBP20.46■□□□□ 0.87
GREB1-209ENST00000472040 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
GREB1-209ENST00000472040 STRCP1A6NGW2 1772 aa20.45■□□□□ 0.86
GREB1-209ENST00000472040 HIRIP3Q9BW71 556 aaPredicted RBP20.45■□□□□ 0.86
GREB1-209ENST00000472040 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
GREB1-209ENST00000472040 ADGRL3Q9HAR2 1447 aa20.43■□□□□ 0.86
GREB1-209ENST00000472040 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.42■□□□□ 0.86
GREB1-209ENST00000472040 SAFB2Q14151 953 aaKnown RBP eCLIP20.42■□□□□ 0.86
GREB1-209ENST00000472040 C19orf44Q9H6X5 657 aa20.42■□□□□ 0.86
GREB1-209ENST00000472040 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
GREB1-209ENST00000472040 TMEM94Q12767 1356 aa20.41■□□□□ 0.86
GREB1-209ENST00000472040 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
GREB1-209ENST00000472040 DCCP43146 1447 aa20.4■□□□□ 0.86
GREB1-209ENST00000472040 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.86
GREB1-209ENST00000472040 CCDC7Q96M83 1385 aa20.39■□□□□ 0.85
GREB1-209ENST00000472040 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.85
GREB1-209ENST00000472040 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
GREB1-209ENST00000472040 CDK19Q9BWU1 502 aa20.39■□□□□ 0.85
GREB1-209ENST00000472040 TULP4Q9NRJ4 1543 aa20.38■□□□□ 0.85
GREB1-209ENST00000472040 ATAD2Q6PL18 1390 aa20.38■□□□□ 0.85
GREB1-209ENST00000472040 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
GREB1-209ENST00000472040 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
GREB1-209ENST00000472040 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
GREB1-209ENST00000472040 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
GREB1-209ENST00000472040 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
GREB1-209ENST00000472040 C14orf37Q86TY3 774 aa20.35■□□□□ 0.85
GREB1-209ENST00000472040 ANKARQ7Z5J8 1434 aa20.35■□□□□ 0.85
GREB1-209ENST00000472040 MSH6P52701 1360 aa20.34■□□□□ 0.85
GREB1-209ENST00000472040 NALCNQ8IZF0 1738 aa20.34■□□□□ 0.85
GREB1-209ENST00000472040 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
GREB1-209ENST00000472040 CCDC61Q9Y6R9 512 aa20.33■□□□□ 0.85
GREB1-209ENST00000472040 ATF3P18847 181 aa20.31■□□□□ 0.84
GREB1-209ENST00000472040 NUDT16Q96DE0 195 aaKnown RBP20.31■□□□□ 0.84
GREB1-209ENST00000472040 CABP2Q9NPB3 220 aa20.31■□□□□ 0.84
GREB1-209ENST00000472040 XIRP1Q702N8 1843 aaKnown RBP20.31■□□□□ 0.84
GREB1-209ENST00000472040 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
GREB1-209ENST00000472040 RBM33Q96EV2 1170 aaKnown RBP20.3■□□□□ 0.84
GREB1-209ENST00000472040 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
GREB1-209ENST00000472040 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
GREB1-209ENST00000472040 ATP7BP35670 1465 aa20.28■□□□□ 0.84
GREB1-209ENST00000472040 PRR36Q9H6K5 1346 aa20.26■□□□□ 0.83
GREB1-209ENST00000472040 ZNF692Q9BU19 519 aaPredicted RBP20.24■□□□□ 0.83
GREB1-209ENST00000472040 MST1RQ04912 1400 aa20.24■□□□□ 0.83
GREB1-209ENST00000472040 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
GREB1-209ENST00000472040 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
GREB1-209ENST00000472040 TERF2IPQ9NYB0 399 aa20.23■□□□□ 0.83
GREB1-209ENST00000472040 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
GREB1-209ENST00000472040 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
GREB1-209ENST00000472040 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
GREB1-209ENST00000472040 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
GREB1-209ENST00000472040 SLC12A5Q9H2X9 1139 aa20.22■□□□□ 0.83
GREB1-209ENST00000472040 C1orf167Q5SNV9 1468 aa20.22■□□□□ 0.83
GREB1-209ENST00000472040 TOPAZ1Q8N9V7 1692 aa20.22■□□□□ 0.83
GREB1-209ENST00000472040 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
GREB1-209ENST00000472040 DDX10Q13206 875 aaKnown RBP20.21■□□□□ 0.83
GREB1-209ENST00000472040 MYOM1P52179 1685 aa20.21■□□□□ 0.83
GREB1-209ENST00000472040 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
GREB1-209ENST00000472040 SLAIN2Q9P270 581 aa20.2■□□□□ 0.82
GREB1-209ENST00000472040 POLR3AO14802 1390 aaPredicted RBP20.2■□□□□ 0.82
GREB1-209ENST00000472040 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
GREB1-209ENST00000472040 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
GREB1-209ENST00000472040 PANK3Q9H999 370 aa20.19■□□□□ 0.82
GREB1-209ENST00000472040 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
GREB1-209ENST00000472040 CERKQ8TCT0 537 aa20.18■□□□□ 0.82
GREB1-209ENST00000472040 NUTM2FA1L443 756 aa20.17■□□□□ 0.82
GREB1-209ENST00000472040 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
GREB1-209ENST00000472040 TOM1O60784 492 aa20.17■□□□□ 0.82
GREB1-209ENST00000472040 ESCO1Q5FWF5 840 aa20.17■□□□□ 0.82
GREB1-209ENST00000472040 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
GREB1-209ENST00000472040 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
GREB1-209ENST00000472040 ACEP12821 1306 aa20.15■□□□□ 0.82
GREB1-209ENST00000472040 KIF1AQ12756 1690 aa20.15■□□□□ 0.82
GREB1-209ENST00000472040 A0A1W2PP64 1363 aa20.14■□□□□ 0.81
GREB1-209ENST00000472040 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.81
GREB1-209ENST00000472040 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
GREB1-209ENST00000472040 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
GREB1-209ENST00000472040 CARD14Q9BXL6 1004 aa20.12■□□□□ 0.81
GREB1-209ENST00000472040 KNSTRNQ9Y448 316 aa20.12■□□□□ 0.81
GREB1-209ENST00000472040 AKAP12Q02952 1782 aa20.11■□□□□ 0.81
GREB1-209ENST00000472040 KTN1Q86UP2 1357 aaKnown RBP20.11■□□□□ 0.81
GREB1-209ENST00000472040 PMFBP1Q8TBY8 1022 aa20.11■□□□□ 0.81
GREB1-209ENST00000472040 EDC4Q6P2E9 1401 aaKnown RBP20.1■□□□□ 0.81
GREB1-209ENST00000472040 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
GREB1-209ENST00000472040 USP6P35125 1406 aa20.1■□□□□ 0.81
GREB1-209ENST00000472040 NPHP3Q7Z494 1330 aa20.09■□□□□ 0.81
GREB1-209ENST00000472040 SSH2Q76I76 1423 aa20.09■□□□□ 0.81
GREB1-209ENST00000472040 TTC21AQ8NDW8 1320 aa20.08■□□□□ 0.81
GREB1-209ENST00000472040 MON2Q7Z3U7 1717 aa20.08■□□□□ 0.81
GREB1-209ENST00000472040 PSME1Q06323 249 aa20.08■□□□□ 0.81
GREB1-209ENST00000472040 NSD2O96028 1365 aa20.08■□□□□ 0.8
GREB1-209ENST00000472040 CGNL1Q0VF96 1302 aa20.07■□□□□ 0.8
GREB1-209ENST00000472040 DIEXFQ68CQ4 756 aaKnown RBP20.07■□□□□ 0.8
GREB1-209ENST00000472040 FOXO3O43524 673 aa20.06■□□□□ 0.8
GREB1-209ENST00000472040 NSD3Q9BZ95 1437 aa20.06■□□□□ 0.8
GREB1-209ENST00000472040 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
GREB1-209ENST00000472040 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
GREB1-209ENST00000472040 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
GREB1-209ENST00000472040 KRT28Q7Z3Y7 464 aa20.04■□□□□ 0.8
GREB1-209ENST00000472040 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms