RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 MTRQ99707 1265 aa8.4□□□□□ -1.06
MDM2-216ENST00000471946 HRCP23327 699 aa8.39□□□□□ -1.07
MDM2-216ENST00000471946 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
MDM2-216ENST00000471946 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
MDM2-216ENST00000471946 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
MDM2-216ENST00000471946 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
MDM2-216ENST00000471946 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
MDM2-216ENST00000471946 LILRB3O75022 631 aa8.38□□□□□ -1.07
MDM2-216ENST00000471946 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
MDM2-216ENST00000471946 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
MDM2-216ENST00000471946 BRICD5Q6PL45 260 aa8.38□□□□□ -1.07
MDM2-216ENST00000471946 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
MDM2-216ENST00000471946 ZPR1O75312 459 aa8.37□□□□□ -1.07
MDM2-216ENST00000471946 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
MDM2-216ENST00000471946 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
MDM2-216ENST00000471946 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
MDM2-216ENST00000471946 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
MDM2-216ENST00000471946 Q3C1V9 767 aa8.36□□□□□ -1.07
MDM2-216ENST00000471946 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
MDM2-216ENST00000471946 NKX2-3Q8TAU0 364 aa8.36□□□□□ -1.07
MDM2-216ENST00000471946 SALL2Q9Y467 1007 aaPredicted RBP8.36□□□□□ -1.07
MDM2-216ENST00000471946 MTMR2Q13614 643 aa8.35□□□□□ -1.07
MDM2-216ENST00000471946 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
MDM2-216ENST00000471946 GTF3C3Q9Y5Q9 886 aa8.35□□□□□ -1.07
MDM2-216ENST00000471946 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
MDM2-216ENST00000471946 SPSB2Q99619 263 aa8.34□□□□□ -1.07
MDM2-216ENST00000471946 KCNC4Q03721 635 aa8.33□□□□□ -1.08
MDM2-216ENST00000471946 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
MDM2-216ENST00000471946 USB1Q9BQ65 265 aaKnown RBP8.33□□□□□ -1.08
MDM2-216ENST00000471946 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
MDM2-216ENST00000471946 TLL1O43897 1013 aa8.32□□□□□ -1.08
MDM2-216ENST00000471946 RFC5P40937 340 aa8.32□□□□□ -1.08
MDM2-216ENST00000471946 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
MDM2-216ENST00000471946 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
MDM2-216ENST00000471946 CFAP99D6REC4 459 aa8.31□□□□□ -1.08
MDM2-216ENST00000471946 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
MDM2-216ENST00000471946 TSC1Q92574 1164 aa8.3□□□□□ -1.08
MDM2-216ENST00000471946 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
MDM2-216ENST00000471946 AP1G2O75843 785 aa8.28□□□□□ -1.08
MDM2-216ENST00000471946 ADH1BP00325 375 aa8.28□□□□□ -1.08
MDM2-216ENST00000471946 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
MDM2-216ENST00000471946 SLC6A16Q9GZN6 736 aa8.27□□□□□ -1.09
MDM2-216ENST00000471946 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
MDM2-216ENST00000471946 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
MDM2-216ENST00000471946 S1PR4O95977 384 aa8.25□□□□□ -1.09
MDM2-216ENST00000471946 MSS51Q4VC12 460 aa8.25□□□□□ -1.09
MDM2-216ENST00000471946 A0A0G2JS52 829 aa8.24□□□□□ -1.09
MDM2-216ENST00000471946 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
MDM2-216ENST00000471946 JUNDP17535 347 aa8.24□□□□□ -1.09
MDM2-216ENST00000471946 MMP16P51512 607 aa8.24□□□□□ -1.09
MDM2-216ENST00000471946 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
MDM2-216ENST00000471946 SNRKQ9NRH2 765 aa8.24□□□□□ -1.09
MDM2-216ENST00000471946 DXOO77932 396 aaKnown RBP8.23□□□□□ -1.09
MDM2-216ENST00000471946 PPP1R18Q6NYC8 613 aa8.23□□□□□ -1.09
MDM2-216ENST00000471946 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
MDM2-216ENST00000471946 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
MDM2-216ENST00000471946 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
MDM2-216ENST00000471946 LRRN4Q8WUT4 740 aa8.23□□□□□ -1.09
MDM2-216ENST00000471946 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
MDM2-216ENST00000471946 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
MDM2-216ENST00000471946 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
MDM2-216ENST00000471946 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.2□□□□□ -1.1
MDM2-216ENST00000471946 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
MDM2-216ENST00000471946 EVA1BQ9NVM1 165 aa8.19□□□□□ -1.1
MDM2-216ENST00000471946 PTPRNQ16849 979 aa8.18□□□□□ -1.1
MDM2-216ENST00000471946 PTCRAQ6ISU1 281 aaPredicted RBP8.18□□□□□ -1.1
MDM2-216ENST00000471946 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
MDM2-216ENST00000471946 NUDT12Q9BQG2 462 aa8.18□□□□□ -1.1
MDM2-216ENST00000471946 HMX1Q9NP08 348 aaPredicted RBP8.18□□□□□ -1.1
MDM2-216ENST00000471946 CTHP32929 405 aa8.17□□□□□ -1.1
MDM2-216ENST00000471946 GGCXP38435 758 aa8.17□□□□□ -1.1
MDM2-216ENST00000471946 FLIIQ13045 1269 aa8.17□□□□□ -1.1
MDM2-216ENST00000471946 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
MDM2-216ENST00000471946 CCNYL3P0C7X3 344 aa8.16□□□□□ -1.1
MDM2-216ENST00000471946 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
MDM2-216ENST00000471946 NR6A1Q15406 480 aa8.16□□□□□ -1.1
MDM2-216ENST00000471946 MTMR14Q8NCE2 650 aa8.16□□□□□ -1.1
MDM2-216ENST00000471946 F12P00748 615 aaPredicted RBP8.15□□□□□ -1.1
MDM2-216ENST00000471946 MCM6Q14566 821 aa8.15□□□□□ -1.1
MDM2-216ENST00000471946 ANKLE1Q8NAG6 615 aa8.15□□□□□ -1.1
MDM2-216ENST00000471946 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
MDM2-216ENST00000471946 MAP10Q9P2G4 905 aa8.15□□□□□ -1.1
MDM2-216ENST00000471946 PLA2G2CQ5R387 149 aa8.14□□□□□ -1.11
MDM2-216ENST00000471946 TRIM34Q9BYJ4 488 aa8.14□□□□□ -1.11
MDM2-216ENST00000471946 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
MDM2-216ENST00000471946 EMID1Q96A84 441 aaPredicted RBP8.11□□□□□ -1.11
MDM2-216ENST00000471946 POM121Q96HA1 1249 aa8.11□□□□□ -1.11
MDM2-216ENST00000471946 IRX2Q9BZI1 471 aaPredicted RBP8.11□□□□□ -1.11
MDM2-216ENST00000471946 ZBTB24O43167 697 aaPredicted RBP8.1□□□□□ -1.11
MDM2-216ENST00000471946 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
MDM2-216ENST00000471946 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
MDM2-216ENST00000471946 GDPD2Q9HCC8 539 aa8.1□□□□□ -1.11
MDM2-216ENST00000471946 SOCS7O14512 581 aa8.09□□□□□ -1.11
MDM2-216ENST00000471946 BAP1Q92560 729 aa8.09□□□□□ -1.11
MDM2-216ENST00000471946 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
MDM2-216ENST00000471946 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
MDM2-216ENST00000471946 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
MDM2-216ENST00000471946 RGS20O76081 388 aa8.08□□□□□ -1.12
MDM2-216ENST00000471946 SLC19A1P41440 591 aa8.08□□□□□ -1.12
MDM2-216ENST00000471946 C14orf37Q86TY3 774 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms