RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
CCDC78-208ENST00000471861 CDC42BPGQ6DT37 1551 aa30.15■■■□□ 2.42
CCDC78-208ENST00000471861 PXDNQ92626 1479 aa30.14■■■□□ 2.42
CCDC78-208ENST00000471861 VGFO15240 615 aaPredicted RBP30.14■■■□□ 2.42
CCDC78-208ENST00000471861 PPLO60437 1756 aa30.13■■■□□ 2.41
CCDC78-208ENST00000471861 BCL9LQ86UU0 1499 aa30.12■■■□□ 2.41
CCDC78-208ENST00000471861 MARF1Q9Y4F3 1742 aaKnown RBP30.09■■■□□ 2.41
CCDC78-208ENST00000471861 RRBP1Q9P2E9 1410 aaKnown RBP30.08■■■□□ 2.41
CCDC78-208ENST00000471861 RPGRIP1LQ68CZ1 1315 aa30.07■■■□□ 2.4
CCDC78-208ENST00000471861 NPHP3Q7Z494 1330 aa30.06■■■□□ 2.4
CCDC78-208ENST00000471861 ESCO1Q5FWF5 840 aa30.04■■■□□ 2.4
CCDC78-208ENST00000471861 XPCQ01831 940 aaPredicted RBP30.03■■■□□ 2.4
CCDC78-208ENST00000471861 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.01■■■□□ 2.39
CCDC78-208ENST00000471861 FOXO3O43524 673 aa30■■■□□ 2.39
CCDC78-208ENST00000471861 TECPR2O15040 1411 aa29.99■■■□□ 2.39
CCDC78-208ENST00000471861 ZRANB1Q9UGI0 708 aa29.99■■■□□ 2.39
CCDC78-208ENST00000471861 GLI3P10071 1580 aa29.98■■■□□ 2.39
CCDC78-208ENST00000471861 GJD4Q96KN9 370 aaPredicted RBP29.97■■■□□ 2.39
CCDC78-208ENST00000471861 ADGRF5Q8IZF2 1346 aa29.96■■■□□ 2.39
CCDC78-208ENST00000471861 SLIT2O94813 1529 aa29.96■■■□□ 2.39
CCDC78-208ENST00000471861 PLEKHH1Q9ULM0 1364 aa29.94■■■□□ 2.38
CCDC78-208ENST00000471861 NUTM2FA1L443 756 aa29.94■■■□□ 2.38
CCDC78-208ENST00000471861 WAPLQ7Z5K2 1190 aa29.94■■■□□ 2.38
CCDC78-208ENST00000471861 SLC4A1APQ9BWU0 796 aaKnown RBP29.94■■■□□ 2.38
CCDC78-208ENST00000471861 RALGAPBQ86X10 1494 aa29.93■■■□□ 2.38
CCDC78-208ENST00000471861 KNDC1Q76NI1 1749 aa29.93■■■□□ 2.38
CCDC78-208ENST00000471861 CCDC125Q86Z20 511 aa29.92■■■□□ 2.38
CCDC78-208ENST00000471861 FMN2Q9NZ56 1722 aa29.92■■■□□ 2.38
CCDC78-208ENST00000471861 LRPPRCP42704 1394 aaKnown RBP29.91■■■□□ 2.38
CCDC78-208ENST00000471861 IFT172Q9UG01 1749 aa29.91■■■□□ 2.38
CCDC78-208ENST00000471861 USP32Q8NFA0 1604 aa29.9■■■□□ 2.38
CCDC78-208ENST00000471861 FOXD1Q16676 465 aa29.9■■■□□ 2.38
CCDC78-208ENST00000471861 SPATA31E1Q6ZUB1 1445 aa29.89■■■□□ 2.38
CCDC78-208ENST00000471861 STK26Q9P289 416 aa29.89■■■□□ 2.38
CCDC78-208ENST00000471861 SPATA31A3Q5VYP0 1347 aa29.89■■■□□ 2.38
CCDC78-208ENST00000471861 KIF1AQ12756 1690 aa29.88■■■□□ 2.37
CCDC78-208ENST00000471861 ABCC11Q96J66 1382 aa29.88■■■□□ 2.37
CCDC78-208ENST00000471861 UNC5CLQ8IV45 518 aa29.87■■■□□ 2.37
CCDC78-208ENST00000471861 BLMP54132 1417 aaPredicted RBP29.87■■■□□ 2.37
CCDC78-208ENST00000471861 BRWD3Q6RI45 1802 aa29.86■■■□□ 2.37
CCDC78-208ENST00000471861 TMEM132EQ6IEE7 984 aa29.84■■■□□ 2.37
CCDC78-208ENST00000471861 CCDC144AA2RUR9 1427 aa29.84■■■□□ 2.37
CCDC78-208ENST00000471861 PIK3C2GO75747 1445 aa29.84■■■□□ 2.37
CCDC78-208ENST00000471861 ANKRD30BQ9BXX2 1392 aa29.81■■■□□ 2.36
CCDC78-208ENST00000471861 RGL3Q3MIN7 710 aa29.8■■■□□ 2.36
CCDC78-208ENST00000471861 YTHDC2Q9H6S0 1430 aaKnown RBP29.79■■■□□ 2.36
CCDC78-208ENST00000471861 DEFB132Q7Z7B7 95 aa29.79■■■□□ 2.36
CCDC78-208ENST00000471861 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
CCDC78-208ENST00000471861 PLCH1Q4KWH8 1693 aa29.79■■■□□ 2.36
CCDC78-208ENST00000471861 ABCA3Q99758 1704 aa29.78■■■□□ 2.36
CCDC78-208ENST00000471861 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
CCDC78-208ENST00000471861 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
CCDC78-208ENST00000471861 SEPT12Q8IYM1 358 aa29.75■■■□□ 2.35
CCDC78-208ENST00000471861 NWD2Q9ULI1 1742 aa29.74■■■□□ 2.35
CCDC78-208ENST00000471861 CABLES1Q8TDN4 633 aa29.74■■■□□ 2.35
CCDC78-208ENST00000471861 VPS72Q15906 364 aa29.73■■■□□ 2.35
CCDC78-208ENST00000471861 NRXN1Q9ULB1 1477 aa29.71■■■□□ 2.35
CCDC78-208ENST00000471861 PHF8Q9UPP1 1060 aa29.7■■■□□ 2.35
CCDC78-208ENST00000471861 LRP5O75197 1615 aa29.7■■■□□ 2.34
CCDC78-208ENST00000471861 SBNO1A3KN83 1393 aa29.68■■■□□ 2.34
CCDC78-208ENST00000471861 ONECUT3O60422 494 aaPredicted RBP29.68■■■□□ 2.34
CCDC78-208ENST00000471861 PLEKHG5O94827 1062 aa29.67■■■□□ 2.34
CCDC78-208ENST00000471861 SIRT1Q96EB6 747 aa29.67■■■□□ 2.34
CCDC78-208ENST00000471861 NRAPQ86VF7 1730 aa29.65■■■□□ 2.34
CCDC78-208ENST00000471861 HAP1P54257 671 aaPredicted RBP29.65■■■□□ 2.34
CCDC78-208ENST00000471861 MPHOSPH9Q99550 1183 aa29.65■■■□□ 2.34
CCDC78-208ENST00000471861 C14orf93Q9H972 538 aaKnown RBP29.64■■■□□ 2.34
CCDC78-208ENST00000471861 PSME1Q06323 249 aa29.63■■■□□ 2.33
CCDC78-208ENST00000471861 KRT27Q7Z3Y8 459 aa29.63■■■□□ 2.33
CCDC78-208ENST00000471861 ARHGEF10O15013 1369 aa29.63■■■□□ 2.33
CCDC78-208ENST00000471861 SF3B2Q13435 895 aaKnown RBP29.62■■■□□ 2.33
CCDC78-208ENST00000471861 CCDC9Q9Y3X0 531 aaKnown RBP29.61■■■□□ 2.33
CCDC78-208ENST00000471861 TRPM3Q9HCF6 1732 aaPredicted RBP29.6■■■□□ 2.33
CCDC78-208ENST00000471861 FAM83GA6ND36 823 aa29.6■■■□□ 2.33
CCDC78-208ENST00000471861 CFAP70Q5T0N1 1121 aa29.6■■■□□ 2.33
CCDC78-208ENST00000471861 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
CCDC78-208ENST00000471861 SAFB2Q14151 953 aaKnown RBP eCLIP29.58■■■□□ 2.33
CCDC78-208ENST00000471861 LMOD2Q6P5Q4 547 aa29.58■■■□□ 2.33
CCDC78-208ENST00000471861 PRAM1Q96QH2 718 aa29.58■■■□□ 2.33
CCDC78-208ENST00000471861 ANKARQ7Z5J8 1434 aa29.57■■■□□ 2.32
CCDC78-208ENST00000471861 DHX57Q6P158 1386 aaKnown RBP29.57■■■□□ 2.32
CCDC78-208ENST00000471861 DLC1Q96QB1 1528 aa29.56■■■□□ 2.32
CCDC78-208ENST00000471861 ALS2Q96Q42 1657 aa29.56■■■□□ 2.32
CCDC78-208ENST00000471861 PMFBP1Q8TBY8 1022 aa29.55■■■□□ 2.32
CCDC78-208ENST00000471861 PSDA5PKW4 1024 aaPredicted RBP29.54■■■□□ 2.32
CCDC78-208ENST00000471861 FAM98CQ17RN3 349 aaKnown RBP29.53■■■□□ 2.32
CCDC78-208ENST00000471861 COL14A1Q05707 1796 aaKnown RBP29.52■■■□□ 2.32
CCDC78-208ENST00000471861 ADGRB1O14514 1584 aa29.52■■■□□ 2.32
CCDC78-208ENST00000471861 CRYBG1Q9Y4K1 1723 aa29.51■■■□□ 2.31
CCDC78-208ENST00000471861 A0A0G2JS52 829 aa29.5■■■□□ 2.31
CCDC78-208ENST00000471861 HRCP23327 699 aa29.5■■■□□ 2.31
CCDC78-208ENST00000471861 BAG6P46379 1132 aa29.5■■■□□ 2.31
CCDC78-208ENST00000471861 MYT1Q01538 1121 aa29.5■■■□□ 2.31
CCDC78-208ENST00000471861 BTG4Q9NY30 223 aa29.5■■■□□ 2.31
CCDC78-208ENST00000471861 THSD7AQ9UPZ6 1657 aa29.48■■■□□ 2.31
CCDC78-208ENST00000471861 RGPD1P0DJD0 1748 aa29.48■■■□□ 2.31
CCDC78-208ENST00000471861 PRR36Q9H6K5 1346 aa29.47■■■□□ 2.31
CCDC78-208ENST00000471861 FAM182BQ5T319 152 aa29.46■■■□□ 2.31
CCDC78-208ENST00000471861 TNS1Q9HBL0 1735 aaKnown RBP29.45■■■□□ 2.31
CCDC78-208ENST00000471861 TULP4Q9NRJ4 1543 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms