RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 SOS2Q07890 1332 aaPredicted RBP27.84■■■□□ 2.05
COMMD1-207ENST00000471704 ABCC11Q96J66 1382 aa27.83■■■□□ 2.05
COMMD1-207ENST00000471704 NRXN1Q9ULB1 1477 aa27.83■■■□□ 2.04
COMMD1-207ENST00000471704 CDC42BPGQ6DT37 1551 aa27.82■■■□□ 2.04
COMMD1-207ENST00000471704 HRCP23327 699 aa27.81■■■□□ 2.04
COMMD1-207ENST00000471704 MYOM2P54296 1465 aa27.81■■■□□ 2.04
COMMD1-207ENST00000471704 TMEM132EQ6IEE7 984 aa27.8■■■□□ 2.04
COMMD1-207ENST00000471704 STK26Q9P289 416 aa27.8■■■□□ 2.04
COMMD1-207ENST00000471704 WAPLQ7Z5K2 1190 aa27.79■■■□□ 2.04
COMMD1-207ENST00000471704 C14orf93Q9H972 538 aaKnown RBP27.77■■■□□ 2.04
COMMD1-207ENST00000471704 AFF2P51816 1311 aa27.76■■■□□ 2.03
COMMD1-207ENST00000471704 YTHDC2Q9H6S0 1430 aaKnown RBP27.75■■■□□ 2.03
COMMD1-207ENST00000471704 PLEKHH1Q9ULM0 1364 aa27.75■■■□□ 2.03
COMMD1-207ENST00000471704 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
COMMD1-207ENST00000471704 ESCO1Q5FWF5 840 aa27.72■■■□□ 2.03
COMMD1-207ENST00000471704 RXRBP28702 533 aa27.71■■■□□ 2.03
COMMD1-207ENST00000471704 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
COMMD1-207ENST00000471704 NPHP3Q7Z494 1330 aa27.69■■■□□ 2.02
COMMD1-207ENST00000471704 CFAP70Q5T0N1 1121 aa27.69■■■□□ 2.02
COMMD1-207ENST00000471704 COL22A1Q8NFW1 1626 aaPredicted RBP27.69■■■□□ 2.02
COMMD1-207ENST00000471704 PXDNQ92626 1479 aa27.69■■■□□ 2.02
COMMD1-207ENST00000471704 CDK12Q9NYV4 1490 aaPredicted RBP27.69■■■□□ 2.02
COMMD1-207ENST00000471704 FMN2Q9NZ56 1722 aa27.68■■■□□ 2.02
COMMD1-207ENST00000471704 ADAMTS2O95450 1211 aa27.66■■■□□ 2.02
COMMD1-207ENST00000471704 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
COMMD1-207ENST00000471704 FOXO3O43524 673 aa27.65■■■□□ 2.02
COMMD1-207ENST00000471704 ADGRB1O14514 1584 aa27.65■■■□□ 2.02
COMMD1-207ENST00000471704 NUTM2FA1L443 756 aa27.64■■■□□ 2.02
COMMD1-207ENST00000471704 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
COMMD1-207ENST00000471704 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
COMMD1-207ENST00000471704 RBM6P78332 1123 aaKnown RBP27.6■■■□□ 2.01
COMMD1-207ENST00000471704 XPCQ01831 940 aaPredicted RBP27.6■■■□□ 2.01
COMMD1-207ENST00000471704 FNBP4Q8N3X1 1017 aaPredicted RBP27.59■■■□□ 2.01
COMMD1-207ENST00000471704 UPF1Q92900 1129 aaKnown RBP eCLIP27.59■■■□□ 2.01
COMMD1-207ENST00000471704 RGPD8O14715 1765 aaPredicted RBP27.58■■■□□ 2.01
COMMD1-207ENST00000471704 DLC1Q96QB1 1528 aa27.58■■■□□ 2.01
COMMD1-207ENST00000471704 KIF1AQ12756 1690 aa27.58■■■□□ 2.01
COMMD1-207ENST00000471704 PRAM1Q96QH2 718 aa27.57■■■□□ 2
COMMD1-207ENST00000471704 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
COMMD1-207ENST00000471704 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
COMMD1-207ENST00000471704 RGS12O14924 1447 aa27.54■■■□□ 2
COMMD1-207ENST00000471704 USP21Q9UK80 565 aa27.54■■■□□ 2
COMMD1-207ENST00000471704 MARF1Q9Y4F3 1742 aaKnown RBP27.54■■■□□ 2
COMMD1-207ENST00000471704 STAC3Q96MF2 364 aa27.53■■■□□ 2
COMMD1-207ENST00000471704 SPATA31A3Q5VYP0 1347 aa27.52■■■□□ 2
COMMD1-207ENST00000471704 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
COMMD1-207ENST00000471704 ARHGEF28Q8N1W1 1705 aaKnown RBP27.5■■□□□ 1.99
COMMD1-207ENST00000471704 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
COMMD1-207ENST00000471704 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
COMMD1-207ENST00000471704 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
COMMD1-207ENST00000471704 ADGRB2O60241 1585 aa27.5■■□□□ 1.99
COMMD1-207ENST00000471704 POGKQ9P215 609 aa27.49■■□□□ 1.99
COMMD1-207ENST00000471704 ATRNO75882 1429 aa27.49■■□□□ 1.99
COMMD1-207ENST00000471704 USP32Q8NFA0 1604 aa27.49■■□□□ 1.99
COMMD1-207ENST00000471704 KIAA1210Q9ULL0 1709 aa27.48■■□□□ 1.99
COMMD1-207ENST00000471704 BCL9LQ86UU0 1499 aa27.48■■□□□ 1.99
COMMD1-207ENST00000471704 TRAK1Q9UPV9 953 aa27.46■■□□□ 1.99
COMMD1-207ENST00000471704 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
COMMD1-207ENST00000471704 PSME1Q06323 249 aa27.43■■□□□ 1.98
COMMD1-207ENST00000471704 TNS3Q68CZ2 1445 aa27.42■■□□□ 1.98
COMMD1-207ENST00000471704 SBNO1A3KN83 1393 aa27.42■■□□□ 1.98
COMMD1-207ENST00000471704 HIRIP3Q9BW71 556 aaPredicted RBP27.39■■□□□ 1.98
COMMD1-207ENST00000471704 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.38■■□□□ 1.97
COMMD1-207ENST00000471704 SLIT2O94813 1529 aa27.38■■□□□ 1.97
COMMD1-207ENST00000471704 MINK1Q8N4C8 1332 aaPredicted RBP27.38■■□□□ 1.97
COMMD1-207ENST00000471704 PMFBP1Q8TBY8 1022 aa27.37■■□□□ 1.97
COMMD1-207ENST00000471704 PRR36Q9H6K5 1346 aa27.37■■□□□ 1.97
COMMD1-207ENST00000471704 WASLO00401 505 aaPredicted RBP27.36■■□□□ 1.97
COMMD1-207ENST00000471704 GJD4Q96KN9 370 aaPredicted RBP27.35■■□□□ 1.97
COMMD1-207ENST00000471704 TULP4Q9NRJ4 1543 aa27.35■■□□□ 1.97
COMMD1-207ENST00000471704 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
COMMD1-207ENST00000471704 UNC5CLQ8IV45 518 aa27.34■■□□□ 1.97
COMMD1-207ENST00000471704 CABLES1Q8TDN4 633 aa27.34■■□□□ 1.97
COMMD1-207ENST00000471704 ARHGEF10O15013 1369 aa27.34■■□□□ 1.97
COMMD1-207ENST00000471704 ABCA3Q99758 1704 aa27.33■■□□□ 1.97
COMMD1-207ENST00000471704 TRPM3Q9HCF6 1732 aaPredicted RBP27.33■■□□□ 1.97
COMMD1-207ENST00000471704 EP400Q96L91 3159 aa27.33■■□□□ 1.97
COMMD1-207ENST00000471704 ATAD2Q6PL18 1390 aa27.33■■□□□ 1.97
COMMD1-207ENST00000471704 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
COMMD1-207ENST00000471704 TRPM1Q7Z4N2 1603 aa27.29■■□□□ 1.96
COMMD1-207ENST00000471704 ALS2Q96Q42 1657 aa27.28■■□□□ 1.96
COMMD1-207ENST00000471704 GLI3P10071 1580 aa27.28■■□□□ 1.96
COMMD1-207ENST00000471704 RALGAPBQ86X10 1494 aa27.28■■□□□ 1.96
COMMD1-207ENST00000471704 NBPF1Q3BBV0 1214 aa27.28■■□□□ 1.96
COMMD1-207ENST00000471704 LMOD2Q6P5Q4 547 aa27.28■■□□□ 1.96
COMMD1-207ENST00000471704 ITSN1Q15811 1721 aa27.27■■□□□ 1.96
COMMD1-207ENST00000471704 NWD2Q9ULI1 1742 aa27.27■■□□□ 1.96
COMMD1-207ENST00000471704 GPRASP1Q5JY77 1395 aa27.26■■□□□ 1.95
COMMD1-207ENST00000471704 HAP1P54257 671 aaPredicted RBP27.26■■□□□ 1.95
COMMD1-207ENST00000471704 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
COMMD1-207ENST00000471704 PLCH1Q4KWH8 1693 aa27.25■■□□□ 1.95
COMMD1-207ENST00000471704 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
COMMD1-207ENST00000471704 ATP7BP35670 1465 aa27.24■■□□□ 1.95
COMMD1-207ENST00000471704 FAM83GA6ND36 823 aa27.23■■□□□ 1.95
COMMD1-207ENST00000471704 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
COMMD1-207ENST00000471704 VPS72Q15906 364 aa27.23■■□□□ 1.95
COMMD1-207ENST00000471704 NUDT16Q96DE0 195 aaKnown RBP27.22■■□□□ 1.95
COMMD1-207ENST00000471704 QRICH2Q9H0J4 1663 aa27.21■■□□□ 1.95
COMMD1-207ENST00000471704 NGDNQ8NEJ9 315 aaKnown RBP27.21■■□□□ 1.95
COMMD1-207ENST00000471704 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms