RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 PLCB2Q00722 1185 aa6.27□□□□□ -1.41
SCN3A-207ENST00000471697 MSS51Q4VC12 460 aa6.27□□□□□ -1.41
SCN3A-207ENST00000471697 ERBB4Q15303 1308 aa6.26□□□□□ -1.41
SCN3A-207ENST00000471697 TRIM32Q13049 653 aa6.26□□□□□ -1.41
SCN3A-207ENST00000471697 KCTD17Q8N5Z5 321 aa6.25□□□□□ -1.41
SCN3A-207ENST00000471697 BRICD5Q6PL45 260 aa6.24□□□□□ -1.41
SCN3A-207ENST00000471697 PRDM9Q9NQV7 894 aa6.24□□□□□ -1.41
SCN3A-207ENST00000471697 VSIG8P0DPA2 414 aa6.23□□□□□ -1.41
SCN3A-207ENST00000471697 PXYLP1Q8TE99 480 aa6.23□□□□□ -1.41
SCN3A-207ENST00000471697 SLC27A5Q9Y2P5 690 aa6.23□□□□□ -1.41
SCN3A-207ENST00000471697 ATP6V1AP38606 617 aa6.22□□□□□ -1.41
SCN3A-207ENST00000471697 FAM161AQ3B820 660 aa6.22□□□□□ -1.41
SCN3A-207ENST00000471697 TRIM46Q7Z4K8 759 aa6.22□□□□□ -1.41
SCN3A-207ENST00000471697 OATP04181 439 aa6.21□□□□□ -1.42
SCN3A-207ENST00000471697 VEGFBP49765 207 aa6.21□□□□□ -1.42
SCN3A-207ENST00000471697 MMP16P51512 607 aa6.21□□□□□ -1.42
SCN3A-207ENST00000471697 FUT2Q10981 343 aa6.2□□□□□ -1.42
SCN3A-207ENST00000471697 WDR70Q9NW82 654 aa6.2□□□□□ -1.42
SCN3A-207ENST00000471697 WNT7BP56706 349 aa6.19□□□□□ -1.42
SCN3A-207ENST00000471697 TMEM151AQ8N4L1 468 aa6.19□□□□□ -1.42
SCN3A-207ENST00000471697 TIMELESSQ9UNS1 1208 aa6.19□□□□□ -1.42
SCN3A-207ENST00000471697 RC3H1Q5TC82 1133 aaKnown RBP6.18□□□□□ -1.42
SCN3A-207ENST00000471697 FECHP22830 423 aa6.17□□□□□ -1.42
SCN3A-207ENST00000471697 MLLT3P42568 568 aaPredicted RBP6.17□□□□□ -1.42
SCN3A-207ENST00000471697 SKOR1P84550 965 aa6.17□□□□□ -1.42
SCN3A-207ENST00000471697 GDF11O95390 407 aa6.16□□□□□ -1.42
SCN3A-207ENST00000471697 BMP1P13497 986 aa6.16□□□□□ -1.42
SCN3A-207ENST00000471697 GCGRP47871 477 aa6.16□□□□□ -1.42
SCN3A-207ENST00000471697 RASSF7Q02833 373 aa6.16□□□□□ -1.42
SCN3A-207ENST00000471697 TPRNQ4KMQ1 711 aa6.16□□□□□ -1.42
SCN3A-207ENST00000471697 METTL3Q86U44 580 aaKnown RBP6.16□□□□□ -1.42
SCN3A-207ENST00000471697 CAPN5O15484 640 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-207ENST00000471697 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.42
SCN3A-207ENST00000471697 FCHSD2O94868 740 aa6.15□□□□□ -1.42
SCN3A-207ENST00000471697 RNF19BQ6ZMZ0 732 aa6.15□□□□□ -1.42
SCN3A-207ENST00000471697 BBXQ8WY36 941 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-207ENST00000471697 RNF225M0QZC1 329 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-207ENST00000471697 SIAH2O43255 324 aa6.14□□□□□ -1.43
SCN3A-207ENST00000471697 ALDH1A1P00352 501 aa6.14□□□□□ -1.43
SCN3A-207ENST00000471697 HAP1P54257 671 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-207ENST00000471697 VSIG10Q8N0Z9 540 aa6.14□□□□□ -1.43
SCN3A-207ENST00000471697 RDH13Q8NBN7 331 aa6.14□□□□□ -1.43
SCN3A-207ENST00000471697 Q3C1V9 767 aa6.13□□□□□ -1.43
SCN3A-207ENST00000471697 ZFP42Q96MM3 310 aa6.13□□□□□ -1.43
SCN3A-207ENST00000471697 TULP1O00294 542 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-207ENST00000471697 IGHA1P01876 353 aa6.12□□□□□ -1.43
SCN3A-207ENST00000471697 GRIPAP1Q4V328 841 aa6.12□□□□□ -1.43
SCN3A-207ENST00000471697 XP32Q5T750 250 aa6.12□□□□□ -1.43
SCN3A-207ENST00000471697 NUTM2FA1L443 756 aa6.11□□□□□ -1.43
SCN3A-207ENST00000471697 ARHGEF1Q92888 912 aaKnown RBP6.11□□□□□ -1.43
SCN3A-207ENST00000471697 ERICH6Q7L0X2 663 aa6.1□□□□□ -1.43
SCN3A-207ENST00000471697 SULF1Q8IWU6 871 aa6.1□□□□□ -1.43
SCN3A-207ENST00000471697 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
SCN3A-207ENST00000471697 DDX11L8A8MPP1 907 aa6.09□□□□□ -1.43
SCN3A-207ENST00000471697 HOMEZQ8IX15 550 aa6.09□□□□□ -1.43
SCN3A-207ENST00000471697 SPRYD3Q8NCJ5 442 aa6.09□□□□□ -1.43
SCN3A-207ENST00000471697 USB1Q9BQ65 265 aaKnown RBP6.09□□□□□ -1.43
SCN3A-207ENST00000471697 DNMT3AQ9Y6K1 912 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-207ENST00000471697 HIC1Q14526 733 aa6.08□□□□□ -1.44
SCN3A-207ENST00000471697 WASF2Q9Y6W5 498 aa6.08□□□□□ -1.44
SCN3A-207ENST00000471697 FOXK2Q01167 660 aa6.07□□□□□ -1.44
SCN3A-207ENST00000471697 ADAMTS8Q9UP79 889 aa6.07□□□□□ -1.44
SCN3A-207ENST00000471697 MRPL14Q6P1L8 145 aaKnown RBP6.06□□□□□ -1.44
SCN3A-207ENST00000471697 PAXIP1Q6ZW49 1069 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-207ENST00000471697 EHBP1Q8NDI1 1231 aa6.06□□□□□ -1.44
SCN3A-207ENST00000471697 CFAP44Q96MT7 982 aa6.06□□□□□ -1.44
SCN3A-207ENST00000471697 GTF3C3Q9Y5Q9 886 aa6.06□□□□□ -1.44
SCN3A-207ENST00000471697 CCDC24Q8N4L8 307 aa6.05□□□□□ -1.44
SCN3A-207ENST00000471697 SCARF1Q14162 830 aa6.04□□□□□ -1.44
SCN3A-207ENST00000471697 GPAT2Q6NUI2 795 aa6.04□□□□□ -1.44
SCN3A-207ENST00000471697 MPNDQ8N594 471 aa6.04□□□□□ -1.44
SCN3A-207ENST00000471697 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-207ENST00000471697 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
SCN3A-207ENST00000471697 SOBPA7XYQ1 873 aa6.01□□□□□ -1.45
SCN3A-207ENST00000471697 JUNDP17535 347 aa6.01□□□□□ -1.45
SCN3A-207ENST00000471697 KRT76Q01546 638 aa6.01□□□□□ -1.45
SCN3A-207ENST00000471697 KANK3Q6NY19 840 aa6.01□□□□□ -1.45
SCN3A-207ENST00000471697 PURBQ96QR8 312 aaKnown RBP6.01□□□□□ -1.45
SCN3A-207ENST00000471697 TIMP2P16035 220 aa6□□□□□ -1.45
SCN3A-207ENST00000471697 KLF16Q9BXK1 252 aaPredicted RBP6□□□□□ -1.45
SCN3A-207ENST00000471697 PLEKHG3A1L390 1219 aa5.99□□□□□ -1.45
SCN3A-207ENST00000471697 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-207ENST00000471697 GNPATO15228 680 aa5.99□□□□□ -1.45
SCN3A-207ENST00000471697 SH3BP2P78314 561 aa5.99□□□□□ -1.45
SCN3A-207ENST00000471697 NNTQ13423 1086 aa5.99□□□□□ -1.45
SCN3A-207ENST00000471697 PTCRAQ6ISU1 281 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-207ENST00000471697 ADAM23O75077 832 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 ADH1CP00326 375 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 CD46P15529 392 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 USP46P62068 366 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-207ENST00000471697 NLRP7Q8WX94 980 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 PHOX2BQ99453 314 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 KRTAP9-2Q9BYQ4 174 aa5.98□□□□□ -1.45
SCN3A-207ENST00000471697 MAN1A2O60476 641 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 KDM4AO75164 1064 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 ARHGEF15O94989 841 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 IRS1P35568 1242 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 KCNV2Q8TDN2 545 aa5.97□□□□□ -1.45
SCN3A-207ENST00000471697 NUDT12Q9BQG2 462 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms