RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PROSER2Q86WR7 435 aaPredicted RBP26.83■■□□□ 1.89
PSPC1-203ENST00000471658 TMF1P82094 1093 aa26.82■■□□□ 1.88
PSPC1-203ENST00000471658 SBNO2Q9Y2G9 1366 aa26.82■■□□□ 1.88
PSPC1-203ENST00000471658 WASHC2AQ641Q2 1341 aa26.81■■□□□ 1.88
PSPC1-203ENST00000471658 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.81■■□□□ 1.88
PSPC1-203ENST00000471658 POLR3GLQ9BT43 218 aa26.8■■□□□ 1.88
PSPC1-203ENST00000471658 KIF7Q2M1P5 1343 aa26.8■■□□□ 1.88
PSPC1-203ENST00000471658 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
PSPC1-203ENST00000471658 TULP4Q9NRJ4 1543 aa26.77■■□□□ 1.88
PSPC1-203ENST00000471658 CCDC7Q96M83 1385 aa26.77■■□□□ 1.88
PSPC1-203ENST00000471658 EVC2Q86UK5 1308 aa26.75■■□□□ 1.87
PSPC1-203ENST00000471658 CDK19Q9BWU1 502 aa26.75■■□□□ 1.87
PSPC1-203ENST00000471658 CABP2Q9NPB3 220 aa26.75■■□□□ 1.87
PSPC1-203ENST00000471658 TMEM94Q12767 1356 aa26.74■■□□□ 1.87
PSPC1-203ENST00000471658 SLC24A1O60721 1099 aa26.73■■□□□ 1.87
PSPC1-203ENST00000471658 WASLO00401 505 aaPredicted RBP26.72■■□□□ 1.87
PSPC1-203ENST00000471658 C14orf37Q86TY3 774 aa26.72■■□□□ 1.87
PSPC1-203ENST00000471658 SRPK2P78362 688 aaKnown RBP26.71■■□□□ 1.87
PSPC1-203ENST00000471658 LRRC7Q96NW7 1537 aa26.7■■□□□ 1.86
PSPC1-203ENST00000471658 NALCNQ8IZF0 1738 aa26.69■■□□□ 1.86
PSPC1-203ENST00000471658 NUTM2FA1L443 756 aa26.68■■□□□ 1.86
PSPC1-203ENST00000471658 CDCA8Q53HL2 280 aa26.68■■□□□ 1.86
PSPC1-203ENST00000471658 ADGRL3Q9HAR2 1447 aa26.68■■□□□ 1.86
PSPC1-203ENST00000471658 ADGRB2O60241 1585 aa26.67■■□□□ 1.86
PSPC1-203ENST00000471658 DDX10Q13206 875 aaKnown RBP26.67■■□□□ 1.86
PSPC1-203ENST00000471658 LTBP4Q8N2S1 1624 aa26.64■■□□□ 1.86
PSPC1-203ENST00000471658 XIRP1Q702N8 1843 aaKnown RBP26.63■■□□□ 1.85
PSPC1-203ENST00000471658 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
PSPC1-203ENST00000471658 PRR36Q9H6K5 1346 aa26.63■■□□□ 1.85
PSPC1-203ENST00000471658 NCOA3Q9Y6Q9 1424 aa26.63■■□□□ 1.85
PSPC1-203ENST00000471658 PUS7Q96PZ0 661 aaKnown RBP26.62■■□□□ 1.85
PSPC1-203ENST00000471658 NUDT16Q96DE0 195 aaKnown RBP26.61■■□□□ 1.85
PSPC1-203ENST00000471658 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
PSPC1-203ENST00000471658 SLC12A5Q9H2X9 1139 aa26.6■■□□□ 1.85
PSPC1-203ENST00000471658 CDC42BPGQ6DT37 1551 aa26.59■■□□□ 1.85
PSPC1-203ENST00000471658 ATAD2Q6PL18 1390 aa26.57■■□□□ 1.84
PSPC1-203ENST00000471658 MSH6P52701 1360 aa26.56■■□□□ 1.84
PSPC1-203ENST00000471658 ATP7BP35670 1465 aa26.56■■□□□ 1.84
PSPC1-203ENST00000471658 CABP1Q9NZU7 370 aa26.56■■□□□ 1.84
PSPC1-203ENST00000471658 FMN2Q9NZ56 1722 aa26.56■■□□□ 1.84
PSPC1-203ENST00000471658 USP32Q8NFA0 1604 aa26.55■■□□□ 1.84
PSPC1-203ENST00000471658 ATF3P18847 181 aa26.54■■□□□ 1.84
PSPC1-203ENST00000471658 CCDC61Q9Y6R9 512 aa26.54■■□□□ 1.84
PSPC1-203ENST00000471658 MYOM1P52179 1685 aa26.54■■□□□ 1.84
PSPC1-203ENST00000471658 PANK3Q9H999 370 aa26.53■■□□□ 1.84
PSPC1-203ENST00000471658 PPIP5K1Q6PFW1 1433 aa26.52■■□□□ 1.84
PSPC1-203ENST00000471658 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
PSPC1-203ENST00000471658 ANKARQ7Z5J8 1434 aa26.5■■□□□ 1.83
PSPC1-203ENST00000471658 CADPS2Q86UW7 1296 aa26.5■■□□□ 1.83
PSPC1-203ENST00000471658 DCCP43146 1447 aa26.49■■□□□ 1.83
PSPC1-203ENST00000471658 PMFBP1Q8TBY8 1022 aa26.49■■□□□ 1.83
PSPC1-203ENST00000471658 MST1RQ04912 1400 aa26.47■■□□□ 1.83
PSPC1-203ENST00000471658 ORAI2Q96SN7 254 aa26.47■■□□□ 1.83
PSPC1-203ENST00000471658 ESCO1Q5FWF5 840 aa26.47■■□□□ 1.83
PSPC1-203ENST00000471658 C1orf167Q5SNV9 1468 aa26.46■■□□□ 1.83
PSPC1-203ENST00000471658 TOPAZ1Q8N9V7 1692 aa26.46■■□□□ 1.83
PSPC1-203ENST00000471658 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
PSPC1-203ENST00000471658 CARD14Q9BXL6 1004 aa26.46■■□□□ 1.83
PSPC1-203ENST00000471658 CD163L1Q9NR16 1453 aa26.45■■□□□ 1.82
PSPC1-203ENST00000471658 NINLQ9Y2I6 1382 aa26.45■■□□□ 1.82
PSPC1-203ENST00000471658 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
PSPC1-203ENST00000471658 PHF8Q9UPP1 1060 aa26.43■■□□□ 1.82
PSPC1-203ENST00000471658 ACEP12821 1306 aa26.43■■□□□ 1.82
PSPC1-203ENST00000471658 A0A1W2PP64 1363 aa26.42■■□□□ 1.82
PSPC1-203ENST00000471658 PER1O15534 1290 aaPredicted RBP26.42■■□□□ 1.82
PSPC1-203ENST00000471658 SLAIN2Q9P270 581 aa26.42■■□□□ 1.82
PSPC1-203ENST00000471658 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
PSPC1-203ENST00000471658 TERF2IPQ9NYB0 399 aa26.41■■□□□ 1.82
PSPC1-203ENST00000471658 HDGFL2Q7Z4V5 671 aaPredicted RBP26.4■■□□□ 1.82
PSPC1-203ENST00000471658 NGDNQ8NEJ9 315 aaKnown RBP26.39■■□□□ 1.82
PSPC1-203ENST00000471658 CPSF1Q10570 1443 aaKnown RBP26.39■■□□□ 1.82
PSPC1-203ENST00000471658 ITSN1Q15811 1721 aa26.39■■□□□ 1.81
PSPC1-203ENST00000471658 CNGB1Q14028 1251 aaPredicted RBP26.38■■□□□ 1.81
PSPC1-203ENST00000471658 CERKQ8TCT0 537 aa26.37■■□□□ 1.81
PSPC1-203ENST00000471658 KTN1Q86UP2 1357 aaKnown RBP26.36■■□□□ 1.81
PSPC1-203ENST00000471658 NSD3Q9BZ95 1437 aa26.35■■□□□ 1.81
PSPC1-203ENST00000471658 POLR3AO14802 1390 aaPredicted RBP26.35■■□□□ 1.81
PSPC1-203ENST00000471658 FOXO3O43524 673 aa26.34■■□□□ 1.81
PSPC1-203ENST00000471658 BRINP3Q76B58 766 aa26.34■■□□□ 1.81
PSPC1-203ENST00000471658 DDX17Q92841 729 aaKnown RBP26.34■■□□□ 1.81
PSPC1-203ENST00000471658 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
PSPC1-203ENST00000471658 KNSTRNQ9Y448 316 aa26.34■■□□□ 1.81
PSPC1-203ENST00000471658 AKAP12Q02952 1782 aa26.31■■□□□ 1.8
PSPC1-203ENST00000471658 XPCQ01831 940 aaPredicted RBP26.31■■□□□ 1.8
PSPC1-203ENST00000471658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.31■■□□□ 1.8
PSPC1-203ENST00000471658 AMER1Q5JTC6 1135 aaPredicted RBP26.3■■□□□ 1.8
PSPC1-203ENST00000471658 USP6P35125 1406 aa26.3■■□□□ 1.8
PSPC1-203ENST00000471658 PSME1Q06323 249 aa26.28■■□□□ 1.8
PSPC1-203ENST00000471658 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
PSPC1-203ENST00000471658 MON2Q7Z3U7 1717 aa26.27■■□□□ 1.8
PSPC1-203ENST00000471658 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
PSPC1-203ENST00000471658 UBAP1LF5GYI3 381 aa26.27■■□□□ 1.8
PSPC1-203ENST00000471658 TTC21BQ7Z4L5 1316 aa26.27■■□□□ 1.8
PSPC1-203ENST00000471658 TOM1O60784 492 aa26.26■■□□□ 1.79
PSPC1-203ENST00000471658 IQSEC2Q5JU85 1478 aa26.26■■□□□ 1.79
PSPC1-203ENST00000471658 KIF1AQ12756 1690 aa26.26■■□□□ 1.79
PSPC1-203ENST00000471658 SSH2Q76I76 1423 aa26.26■■□□□ 1.79
PSPC1-203ENST00000471658 KRT28Q7Z3Y7 464 aa26.25■■□□□ 1.79
PSPC1-203ENST00000471658 FYB1O15117 783 aa26.24■■□□□ 1.79
PSPC1-203ENST00000471658 PIP4K2BP78356 416 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms