RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 POTEAQ6S8J7 498 aa14.06□□□□□ -0.16
POLR1A-206ENST00000471427 NALCNQ8IZF0 1738 aa14.06□□□□□ -0.16
POLR1A-206ENST00000471427 DCAF11Q8TEB1 546 aa14.04□□□□□ -0.16
POLR1A-206ENST00000471427 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
POLR1A-206ENST00000471427 ESCO1Q5FWF5 840 aa14.03□□□□□ -0.16
POLR1A-206ENST00000471427 ZNF772Q68DY9 489 aaPredicted RBP14.03□□□□□ -0.16
POLR1A-206ENST00000471427 SHPRHQ149N8 1683 aa14.02□□□□□ -0.16
POLR1A-206ENST00000471427 LAMC1P11047 1609 aa14.02□□□□□ -0.16
POLR1A-206ENST00000471427 NHSL1Q5SYE7 1610 aa14.02□□□□□ -0.16
POLR1A-206ENST00000471427 PLEKHH1Q9ULM0 1364 aa14.02□□□□□ -0.17
POLR1A-206ENST00000471427 KDM2AQ9Y2K7 1162 aa14.02□□□□□ -0.17
POLR1A-206ENST00000471427 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
POLR1A-206ENST00000471427 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
POLR1A-206ENST00000471427 LRP6O75581 1613 aa14.01□□□□□ -0.17
POLR1A-206ENST00000471427 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
POLR1A-206ENST00000471427 PNPLA6Q8IY17 1366 aa14□□□□□ -0.17
POLR1A-206ENST00000471427 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
POLR1A-206ENST00000471427 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
POLR1A-206ENST00000471427 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
POLR1A-206ENST00000471427 FOXO3O43524 673 aa13.99□□□□□ -0.17
POLR1A-206ENST00000471427 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
POLR1A-206ENST00000471427 PRAM1Q96QH2 718 aa13.99□□□□□ -0.17
POLR1A-206ENST00000471427 POGKQ9P215 609 aa13.98□□□□□ -0.17
POLR1A-206ENST00000471427 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
POLR1A-206ENST00000471427 ADGRB1O14514 1584 aa13.96□□□□□ -0.17
POLR1A-206ENST00000471427 TRAK1Q9UPV9 953 aa13.96□□□□□ -0.17
POLR1A-206ENST00000471427 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
POLR1A-206ENST00000471427 RXRBP28702 533 aa13.94□□□□□ -0.18
POLR1A-206ENST00000471427 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
POLR1A-206ENST00000471427 AFF2P51816 1311 aa13.93□□□□□ -0.18
POLR1A-206ENST00000471427 PSME1Q06323 249 aa13.93□□□□□ -0.18
POLR1A-206ENST00000471427 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
POLR1A-206ENST00000471427 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
POLR1A-206ENST00000471427 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
POLR1A-206ENST00000471427 PXDNQ92626 1479 aa13.93□□□□□ -0.18
POLR1A-206ENST00000471427 SPATA31A3Q5VYP0 1347 aa13.92□□□□□ -0.18
POLR1A-206ENST00000471427 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
POLR1A-206ENST00000471427 C8orf37Q96NL8 207 aa13.92□□□□□ -0.18
POLR1A-206ENST00000471427 QTRT2Q9H974 415 aaKnown RBP13.92□□□□□ -0.18
POLR1A-206ENST00000471427 ANKARQ7Z5J8 1434 aa13.91□□□□□ -0.18
POLR1A-206ENST00000471427 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
POLR1A-206ENST00000471427 ADAMTS2O95450 1211 aa13.91□□□□□ -0.18
POLR1A-206ENST00000471427 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
POLR1A-206ENST00000471427 RBM6P78332 1123 aaKnown RBP13.9□□□□□ -0.18
POLR1A-206ENST00000471427 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
POLR1A-206ENST00000471427 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
POLR1A-206ENST00000471427 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
POLR1A-206ENST00000471427 CDK12Q9NYV4 1490 aaPredicted RBP13.88□□□□□ -0.19
POLR1A-206ENST00000471427 L3MBTL2Q969R5 705 aa13.88□□□□□ -0.19
POLR1A-206ENST00000471427 COL22A1Q8NFW1 1626 aaPredicted RBP13.88□□□□□ -0.19
POLR1A-206ENST00000471427 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
POLR1A-206ENST00000471427 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
POLR1A-206ENST00000471427 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
POLR1A-206ENST00000471427 USP21Q9UK80 565 aa13.87□□□□□ -0.19
POLR1A-206ENST00000471427 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
POLR1A-206ENST00000471427 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
POLR1A-206ENST00000471427 KIF1AQ12756 1690 aa13.86□□□□□ -0.19
POLR1A-206ENST00000471427 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
POLR1A-206ENST00000471427 PRR36Q9H6K5 1346 aa13.86□□□□□ -0.19
POLR1A-206ENST00000471427 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
POLR1A-206ENST00000471427 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
POLR1A-206ENST00000471427 NUDT16Q96DE0 195 aaKnown RBP13.84□□□□□ -0.19
POLR1A-206ENST00000471427 ARHGEF10O15013 1369 aa13.83□□□□□ -0.19
POLR1A-206ENST00000471427 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
POLR1A-206ENST00000471427 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
POLR1A-206ENST00000471427 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
POLR1A-206ENST00000471427 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
POLR1A-206ENST00000471427 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
POLR1A-206ENST00000471427 BCL9LQ86UU0 1499 aa13.82□□□□□ -0.2
POLR1A-206ENST00000471427 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
POLR1A-206ENST00000471427 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
POLR1A-206ENST00000471427 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
POLR1A-206ENST00000471427 PLEKHG3A1L390 1219 aa13.81□□□□□ -0.2
POLR1A-206ENST00000471427 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
POLR1A-206ENST00000471427 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
POLR1A-206ENST00000471427 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
POLR1A-206ENST00000471427 ATRNO75882 1429 aa13.81□□□□□ -0.2
POLR1A-206ENST00000471427 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
POLR1A-206ENST00000471427 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
POLR1A-206ENST00000471427 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
POLR1A-206ENST00000471427 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
POLR1A-206ENST00000471427 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
POLR1A-206ENST00000471427 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
POLR1A-206ENST00000471427 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
POLR1A-206ENST00000471427 SLIT2O94813 1529 aa13.78□□□□□ -0.2
POLR1A-206ENST00000471427 POLR3AO14802 1390 aaPredicted RBP13.77□□□□□ -0.21
POLR1A-206ENST00000471427 ATP7BP35670 1465 aa13.77□□□□□ -0.21
POLR1A-206ENST00000471427 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
POLR1A-206ENST00000471427 RGS12O14924 1447 aa13.76□□□□□ -0.21
POLR1A-206ENST00000471427 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
POLR1A-206ENST00000471427 ACEP12821 1306 aa13.75□□□□□ -0.21
POLR1A-206ENST00000471427 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
POLR1A-206ENST00000471427 VPS72Q15906 364 aa13.75□□□□□ -0.21
POLR1A-206ENST00000471427 MARF1Q9Y4F3 1742 aaKnown RBP13.75□□□□□ -0.21
POLR1A-206ENST00000471427 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
POLR1A-206ENST00000471427 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
POLR1A-206ENST00000471427 TRPM3Q9HCF6 1732 aaPredicted RBP13.73□□□□□ -0.21
POLR1A-206ENST00000471427 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
POLR1A-206ENST00000471427 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
POLR1A-206ENST00000471427 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms