RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 SLC27A5Q9Y2P5 690 aa10.49□□□□□ -0.73
CLIP4-209ENST00000471165 TMEM151AQ8N4L1 468 aa10.48□□□□□ -0.73
CLIP4-209ENST00000471165 FUT2Q10981 343 aa10.47□□□□□ -0.73
CLIP4-209ENST00000471165 BRICD5Q6PL45 260 aa10.47□□□□□ -0.73
CLIP4-209ENST00000471165 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
CLIP4-209ENST00000471165 FECHP22830 423 aa10.46□□□□□ -0.73
CLIP4-209ENST00000471165 MSS51Q4VC12 460 aa10.46□□□□□ -0.73
CLIP4-209ENST00000471165 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
CLIP4-209ENST00000471165 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
CLIP4-209ENST00000471165 GDF11O95390 407 aa10.44□□□□□ -0.74
CLIP4-209ENST00000471165 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
CLIP4-209ENST00000471165 PXYLP1Q8TE99 480 aa10.44□□□□□ -0.74
CLIP4-209ENST00000471165 RASSF7Q02833 373 aa10.43□□□□□ -0.74
CLIP4-209ENST00000471165 ALDH1A1P00352 501 aa10.42□□□□□ -0.74
CLIP4-209ENST00000471165 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
CLIP4-209ENST00000471165 CAPN5O15484 640 aaPredicted RBP10.4□□□□□ -0.74
CLIP4-209ENST00000471165 VSIG8P0DPA2 414 aa10.4□□□□□ -0.74
CLIP4-209ENST00000471165 SKOR1P84550 965 aa10.4□□□□□ -0.74
CLIP4-209ENST00000471165 XP32Q5T750 250 aa10.4□□□□□ -0.74
CLIP4-209ENST00000471165 RNF19BQ6ZMZ0 732 aa10.4□□□□□ -0.74
CLIP4-209ENST00000471165 RDH13Q8NBN7 331 aa10.4□□□□□ -0.74
CLIP4-209ENST00000471165 OATP04181 439 aa10.39□□□□□ -0.75
CLIP4-209ENST00000471165 MMP16P51512 607 aa10.38□□□□□ -0.75
CLIP4-209ENST00000471165 ZFP42Q96MM3 310 aa10.37□□□□□ -0.75
CLIP4-209ENST00000471165 WNT7BP56706 349 aa10.36□□□□□ -0.75
CLIP4-209ENST00000471165 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
CLIP4-209ENST00000471165 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
CLIP4-209ENST00000471165 GCGRP47871 477 aa10.33□□□□□ -0.76
CLIP4-209ENST00000471165 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
CLIP4-209ENST00000471165 RNF225M0QZC1 329 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-209ENST00000471165 SIAH2O43255 324 aa10.31□□□□□ -0.76
CLIP4-209ENST00000471165 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
CLIP4-209ENST00000471165 DXOO77932 396 aaKnown RBP10.3□□□□□ -0.76
CLIP4-209ENST00000471165 WASF2Q9Y6W5 498 aa10.3□□□□□ -0.76
CLIP4-209ENST00000471165 FCHSD2O94868 740 aa10.29□□□□□ -0.76
CLIP4-209ENST00000471165 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
CLIP4-209ENST00000471165 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
CLIP4-209ENST00000471165 KRTAP4-8Q9BYQ9 185 aa10.29□□□□□ -0.76
CLIP4-209ENST00000471165 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
CLIP4-209ENST00000471165 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
CLIP4-209ENST00000471165 IGHA1P01876 353 aa10.26□□□□□ -0.77
CLIP4-209ENST00000471165 Q3C1V9 767 aa10.26□□□□□ -0.77
CLIP4-209ENST00000471165 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-209ENST00000471165 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
CLIP4-209ENST00000471165 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
CLIP4-209ENST00000471165 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-209ENST00000471165 USB1Q9BQ65 265 aaKnown RBP10.23□□□□□ -0.77
CLIP4-209ENST00000471165 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
CLIP4-209ENST00000471165 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
CLIP4-209ENST00000471165 SCARF1Q14162 830 aa10.2□□□□□ -0.78
CLIP4-209ENST00000471165 SULF1Q8IWU6 871 aa10.2□□□□□ -0.78
CLIP4-209ENST00000471165 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
CLIP4-209ENST00000471165 NLRP7Q8WX94 980 aa10.2□□□□□ -0.78
CLIP4-209ENST00000471165 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
CLIP4-209ENST00000471165 KRT76Q01546 638 aa10.17□□□□□ -0.78
CLIP4-209ENST00000471165 IRS1P35568 1242 aa10.16□□□□□ -0.78
CLIP4-209ENST00000471165 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
CLIP4-209ENST00000471165 HIC1Q14526 733 aa10.15□□□□□ -0.78
CLIP4-209ENST00000471165 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.14□□□□□ -0.79
CLIP4-209ENST00000471165 FOXK2Q01167 660 aa10.14□□□□□ -0.79
CLIP4-209ENST00000471165 CNTNAP3BQ96NU0 1288 aa10.13□□□□□ -0.79
CLIP4-209ENST00000471165 CNTNAP3Q9BZ76 1288 aa10.13□□□□□ -0.79
CLIP4-209ENST00000471165 MAN1A2O60476 641 aa10.12□□□□□ -0.79
CLIP4-209ENST00000471165 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-209ENST00000471165 TIMP2P16035 220 aa10.11□□□□□ -0.79
CLIP4-209ENST00000471165 NNTQ13423 1086 aa10.11□□□□□ -0.79
CLIP4-209ENST00000471165 ZNF385CQ66K41 422 aaPredicted RBP10.11□□□□□ -0.79
CLIP4-209ENST00000471165 GPR161Q8N6U8 529 aaKnown RBP10.11□□□□□ -0.79
CLIP4-209ENST00000471165 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
CLIP4-209ENST00000471165 ADAM23O75077 832 aa10.1□□□□□ -0.79
CLIP4-209ENST00000471165 SH3BP2P78314 561 aa10.1□□□□□ -0.79
CLIP4-209ENST00000471165 TLL2Q9Y6L7 1015 aa10.1□□□□□ -0.79
CLIP4-209ENST00000471165 JUNDP17535 347 aa10.09□□□□□ -0.79
CLIP4-209ENST00000471165 WDR4P57081 412 aaKnown RBP10.08□□□□□ -0.8
CLIP4-209ENST00000471165 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
CLIP4-209ENST00000471165 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
CLIP4-209ENST00000471165 KRTAP9-6A0A140TA67 174 aa10.07□□□□□ -0.8
CLIP4-209ENST00000471165 ADH1CP00326 375 aa10.07□□□□□ -0.8
CLIP4-209ENST00000471165 PSMG3-AS1Q96PY0 264 aa10.07□□□□□ -0.8
CLIP4-209ENST00000471165 PHOX2BQ99453 314 aa10.07□□□□□ -0.8
CLIP4-209ENST00000471165 NUDT12Q9BQG2 462 aa10.06□□□□□ -0.8
CLIP4-209ENST00000471165 HLA-CQ95604 372 aa10.05□□□□□ -0.8
CLIP4-209ENST00000471165 KLF16Q9BXK1 252 aaPredicted RBP10.05□□□□□ -0.8
CLIP4-209ENST00000471165 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
CLIP4-209ENST00000471165 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CLIP4-209ENST00000471165 GNPATO15228 680 aa10.03□□□□□ -0.8
CLIP4-209ENST00000471165 KDM4AO75164 1064 aa10.03□□□□□ -0.8
CLIP4-209ENST00000471165 C6orf118Q5T5N4 469 aa10.03□□□□□ -0.8
CLIP4-209ENST00000471165 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
CLIP4-209ENST00000471165 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
CLIP4-209ENST00000471165 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
CLIP4-209ENST00000471165 MARSP56192 900 aaKnown RBP10.02□□□□□ -0.81
CLIP4-209ENST00000471165 MPNDQ8N594 471 aa10.02□□□□□ -0.81
CLIP4-209ENST00000471165 CD46P15529 392 aa10□□□□□ -0.81
CLIP4-209ENST00000471165 MSTNO14793 375 aa9.99□□□□□ -0.81
CLIP4-209ENST00000471165 SCARF2Q96GP6 870 aaPredicted RBP9.99□□□□□ -0.81
CLIP4-209ENST00000471165 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
CLIP4-209ENST00000471165 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
CLIP4-209ENST00000471165 RNFT1Q5M7Z0 435 aa9.98□□□□□ -0.81
CLIP4-209ENST00000471165 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms