RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 ATAD2BQ9ULI0 1458 aa11.07□□□□□ -0.64
GPNMB-208ENST00000470994 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
GPNMB-208ENST00000470994 GCGRP47871 477 aa11.06□□□□□ -0.64
GPNMB-208ENST00000470994 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
GPNMB-208ENST00000470994 SLC27A5Q9Y2P5 690 aa11.06□□□□□ -0.64
GPNMB-208ENST00000470994 TTC24A2A3L6 582 aaPredicted RBP11.05□□□□□ -0.64
GPNMB-208ENST00000470994 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-208ENST00000470994 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
GPNMB-208ENST00000470994 FAM160A2Q8N612 972 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-208ENST00000470994 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
GPNMB-208ENST00000470994 Q3C1V9 767 aa11.02□□□□□ -0.65
GPNMB-208ENST00000470994 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
GPNMB-208ENST00000470994 FECHP22830 423 aa11.01□□□□□ -0.65
GPNMB-208ENST00000470994 PRDM9Q9NQV7 894 aa11.01□□□□□ -0.65
GPNMB-208ENST00000470994 GMPR2Q9P2T1 348 aaKnown RBP11.01□□□□□ -0.65
GPNMB-208ENST00000470994 WFS1O76024 890 aa11□□□□□ -0.65
GPNMB-208ENST00000470994 WNT7AO00755 349 aa10.99□□□□□ -0.65
GPNMB-208ENST00000470994 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
GPNMB-208ENST00000470994 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
GPNMB-208ENST00000470994 CUX2O14529 1486 aa10.99□□□□□ -0.65
GPNMB-208ENST00000470994 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
GPNMB-208ENST00000470994 GPR37O15354 613 aa10.98□□□□□ -0.65
GPNMB-208ENST00000470994 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
GPNMB-208ENST00000470994 BAZ1BQ9UIG0 1483 aaKnown RBP10.98□□□□□ -0.65
GPNMB-208ENST00000470994 NESP48681 1621 aa10.98□□□□□ -0.65
GPNMB-208ENST00000470994 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
GPNMB-208ENST00000470994 SMARCA4P51532 1647 aa10.96□□□□□ -0.65
GPNMB-208ENST00000470994 TRIM32Q13049 653 aa10.96□□□□□ -0.65
GPNMB-208ENST00000470994 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
GPNMB-208ENST00000470994 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
GPNMB-208ENST00000470994 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
GPNMB-208ENST00000470994 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
GPNMB-208ENST00000470994 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
GPNMB-208ENST00000470994 MMP16P51512 607 aa10.93□□□□□ -0.66
GPNMB-208ENST00000470994 HMGXB3Q12766 1538 aa10.93□□□□□ -0.66
GPNMB-208ENST00000470994 INSM1Q01101 510 aaPredicted RBP10.92□□□□□ -0.66
GPNMB-208ENST00000470994 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
GPNMB-208ENST00000470994 SMPD1P17405 629 aa10.91□□□□□ -0.66
GPNMB-208ENST00000470994 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
GPNMB-208ENST00000470994 ATP13A2Q9NQ11 1180 aa10.91□□□□□ -0.66
GPNMB-208ENST00000470994 MRGPRX2Q96LB1 330 aa10.9□□□□□ -0.66
GPNMB-208ENST00000470994 USB1Q9BQ65 265 aaKnown RBP10.9□□□□□ -0.66
GPNMB-208ENST00000470994 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.67
GPNMB-208ENST00000470994 NFX1Q12986 1120 aaKnown RBP10.89□□□□□ -0.67
GPNMB-208ENST00000470994 WIPF1O43516 503 aa10.88□□□□□ -0.67
GPNMB-208ENST00000470994 KDM4AO75164 1064 aa10.88□□□□□ -0.67
GPNMB-208ENST00000470994 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
GPNMB-208ENST00000470994 USP46P62068 366 aa10.88□□□□□ -0.67
GPNMB-208ENST00000470994 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
GPNMB-208ENST00000470994 CD46P15529 392 aa10.87□□□□□ -0.67
GPNMB-208ENST00000470994 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
GPNMB-208ENST00000470994 CCDC24Q8N4L8 307 aa10.86□□□□□ -0.67
GPNMB-208ENST00000470994 PDS5BQ9NTI5 1447 aa10.85□□□□□ -0.67
GPNMB-208ENST00000470994 J3QL48 77 aa10.85□□□□□ -0.67
GPNMB-208ENST00000470994 WNT7BP56706 349 aa10.85□□□□□ -0.67
GPNMB-208ENST00000470994 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
GPNMB-208ENST00000470994 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
GPNMB-208ENST00000470994 TERTO14746 1132 aaKnown RBP10.83□□□□□ -0.68
GPNMB-208ENST00000470994 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
GPNMB-208ENST00000470994 SNRPBP14678 240 aaKnown RBP10.82□□□□□ -0.68
GPNMB-208ENST00000470994 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
GPNMB-208ENST00000470994 HPS1Q92902 700 aa10.8□□□□□ -0.68
GPNMB-208ENST00000470994 PEG3Q9GZU2 1588 aa10.8□□□□□ -0.68
GPNMB-208ENST00000470994 HOXA2O43364 376 aa10.78□□□□□ -0.68
GPNMB-208ENST00000470994 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
GPNMB-208ENST00000470994 SLC16A10Q8TF71 515 aa10.78□□□□□ -0.68
GPNMB-208ENST00000470994 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.68
GPNMB-208ENST00000470994 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
GPNMB-208ENST00000470994 JUNDP17535 347 aa10.77□□□□□ -0.69
GPNMB-208ENST00000470994 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
GPNMB-208ENST00000470994 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
GPNMB-208ENST00000470994 IRF6O14896 467 aa10.75□□□□□ -0.69
GPNMB-208ENST00000470994 SKOR1P84550 965 aa10.75□□□□□ -0.69
GPNMB-208ENST00000470994 MINK1Q8N4C8 1332 aaPredicted RBP10.74□□□□□ -0.69
GPNMB-208ENST00000470994 NUTM1Q86Y26 1132 aa10.73□□□□□ -0.69
GPNMB-208ENST00000470994 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
GPNMB-208ENST00000470994 HLA-CQ95604 372 aa10.73□□□□□ -0.69
GPNMB-208ENST00000470994 CLCN1P35523 988 aa10.72□□□□□ -0.69
GPNMB-208ENST00000470994 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
GPNMB-208ENST00000470994 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
GPNMB-208ENST00000470994 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
GPNMB-208ENST00000470994 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
GPNMB-208ENST00000470994 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
GPNMB-208ENST00000470994 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
GPNMB-208ENST00000470994 GPCPD1Q9NPB8 672 aa10.71□□□□□ -0.69
GPNMB-208ENST00000470994 WIZO95785 1651 aa10.7□□□□□ -0.7
GPNMB-208ENST00000470994 RSF1Q96T23 1441 aaPredicted RBP10.7□□□□□ -0.7
GPNMB-208ENST00000470994 NPAS3Q8IXF0 933 aa10.69□□□□□ -0.7
GPNMB-208ENST00000470994 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
GPNMB-208ENST00000470994 CAPN5O15484 640 aaPredicted RBP10.68□□□□□ -0.7
GPNMB-208ENST00000470994 GUCA2AQ02747 115 aa10.68□□□□□ -0.7
GPNMB-208ENST00000470994 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
GPNMB-208ENST00000470994 IRF7Q92985 503 aa10.67□□□□□ -0.7
GPNMB-208ENST00000470994 CCDC102AQ96A19 550 aa10.67□□□□□ -0.7
GPNMB-208ENST00000470994 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
GPNMB-208ENST00000470994 CCNYL3P0C7X3 344 aa10.66□□□□□ -0.7
GPNMB-208ENST00000470994 MS4A1P11836 297 aa10.66□□□□□ -0.7
GPNMB-208ENST00000470994 LCE2CQ5TA81 110 aa10.66□□□□□ -0.7
GPNMB-208ENST00000470994 FAM217BQ9NTX9 383 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-208ENST00000470994 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms