RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 ERBINQ96RT1 1412 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 PAK3O75914 559 aaPredicted RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 ANKRD20A12PQ8NF67 263 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 DHX29Q7Z478 1369 aaKnown RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 PCF11O94913 1555 aaKnown RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 PDCP20941 246 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 HMGN5P82970 282 aaKnown RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 TEFQ10587 303 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 SYNE3Q6ZMZ3 975 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 FAM43AQ8N2R8 423 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 EPRSP07814 1512 aaKnown RBP4.87□□□□□ -1.63
GABRR3-201ENST00000470589 WDR97A6NE52 1622 aa4.87□□□□□ -1.63
GABRR3-201ENST00000470589 CCP110O43303 1012 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 PSMA5P28066 241 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 PPP2R1AP30153 589 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 TNNT3P45378 269 aaPredicted RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 NFKBIBQ15653 356 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 PNISRQ8TF01 805 aaKnown RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 CCDC47Q96A33 483 aaKnown RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 TMX4Q9H1E5 349 aaPredicted RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 ABCC11Q96J66 1382 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 TEX35Q5T0J7 233 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 NAT10Q9H0A0 1025 aaKnown RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 ACBD3Q9H3P7 528 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 CCDC173Q0VFZ6 552 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 TRIM29Q14134 588 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 ATAD2Q6PL18 1390 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 PLIN1O60240 522 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 IFIT2P09913 472 aaKnown RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 SETQ01105 290 aaPredicted RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 ERC1Q8IUD2 1116 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 BACH2Q9BYV9 841 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 ARGLU1Q9NWB6 273 aaPredicted RBP4.86□□□□□ -1.63
GABRR3-201ENST00000470589 PODXL2Q9NZ53 605 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 KIF14Q15058 1648 aa4.86□□□□□ -1.63
GABRR3-201ENST00000470589 AKAP17AQ02040 695 aaKnown RBP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 MLECQ14165 292 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 GAS2L2Q8NHY3 880 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 RILPL2Q969X0 211 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SMC3Q9UQE7 1217 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SOX12O15370 315 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 NOC3LQ8WTT2 800 aaKnown RBP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SRCIN1Q9C0H9 1055 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 IPO7O95373 1038 aaKnown RBP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 CAVIN1Q6NZI2 390 aaKnown RBP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 RRP7AQ9Y3A4 280 aaKnown RBP4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SASS6Q6UVJ0 657 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 SLC52A1Q9NWF4 448 aa4.85□□□□□ -1.63
GABRR3-201ENST00000470589 NSD2O96028 1365 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 G3BP1Q13283 466 aaKnown RBP eCLIP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 CCDC73Q6ZRK6 1079 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 ZNF692Q9BU19 519 aaPredicted RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 C9orf78Q9NZ63 289 aaPredicted RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 ADAMTS8Q9UP79 889 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 TRDNQ13061 729 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 CCDC30Q5VVM6 783 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 AEBP1Q8IUX7 1158 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 AMOTL1Q8IY63 956 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 CNTROBQ8N137 903 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 NCOA1Q15788 1441 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 A0A0U1RQG5 324 aaPredicted RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 NASPP49321 788 aaPredicted RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 ANKRD1Q15327 319 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 TPD52L1Q16890 204 aaPredicted RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 TTC5Q8N0Z6 440 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 RASSF8Q8NHQ8 419 aa4.84□□□□□ -1.63
GABRR3-201ENST00000470589 RPRD2Q5VT52 1461 aaKnown RBP4.84□□□□□ -1.63
GABRR3-201ENST00000470589 CCT4P50991 539 aaKnown RBP4.84□□□□□ -1.64
GABRR3-201ENST00000470589 TCP11L2Q8N4U5 519 aa4.84□□□□□ -1.64
GABRR3-201ENST00000470589 ANO2Q9NQ90 1003 aa4.84□□□□□ -1.64
GABRR3-201ENST00000470589 CHMP3Q9Y3E7 222 aa4.84□□□□□ -1.64
GABRR3-201ENST00000470589 ITSN2Q9NZM3 1697 aa4.84□□□□□ -1.64
GABRR3-201ENST00000470589 MAGI1Q96QZ7 1491 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 TRAK2O60296 914 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 MYCNP04198 464 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 PLEKHH1Q9ULM0 1364 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 MINK1Q8N4C8 1332 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 CDR1P51861 262 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 CEP89Q96ST8 783 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 PRG4Q92954 1404 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 CAMSAP2Q08AD1 1489 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 CPLX1O14810 134 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 PIP4K2AP48426 406 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 FKBP5Q13451 457 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 SAFBQ15424 915 aaKnown RBP eCLIP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 BCL2L13Q9BXK5 485 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 ZNF644Q9H582 1327 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 NUP160Q12769 1436 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 DHX16O60231 1041 aaKnown RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 UBTFL1P0CB47 393 aaPredicted RBP4.83□□□□□ -1.64
GABRR3-201ENST00000470589 TSPYL4Q9UJ04 414 aa4.83□□□□□ -1.64
GABRR3-201ENST00000470589 GPRASP1Q5JY77 1395 aa4.82□□□□□ -1.64
GABRR3-201ENST00000470589 MVPQ14764 893 aaKnown RBP4.82□□□□□ -1.64
GABRR3-201ENST00000470589 OSCARQ8IYS5 282 aa4.82□□□□□ -1.64
GABRR3-201ENST00000470589 ERCC4Q92889 916 aaPredicted RBP4.82□□□□□ -1.64
GABRR3-201ENST00000470589 WDR33Q9C0J8 1336 aaKnown RBP4.82□□□□□ -1.64
GABRR3-201ENST00000470589 MTHFSP49914 203 aa4.82□□□□□ -1.64
GABRR3-201ENST00000470589 NOM1Q5C9Z4 860 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms