RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 NPHP3Q7Z494 1330 aa28.86■■■□□ 2.21
GCFC2-207ENST00000470503 ADGRF5Q8IZF2 1346 aa28.86■■■□□ 2.21
GCFC2-207ENST00000470503 SPATA31E1Q6ZUB1 1445 aa28.86■■■□□ 2.21
GCFC2-207ENST00000470503 RGL3Q3MIN7 710 aa28.85■■■□□ 2.21
GCFC2-207ENST00000470503 TECPR2O15040 1411 aa28.85■■■□□ 2.21
GCFC2-207ENST00000470503 ABCC11Q96J66 1382 aa28.84■■■□□ 2.21
GCFC2-207ENST00000470503 ADAMTS2O95450 1211 aa28.83■■■□□ 2.21
GCFC2-207ENST00000470503 LRPPRCP42704 1394 aaKnown RBP28.83■■■□□ 2.21
GCFC2-207ENST00000470503 ESCO1Q5FWF5 840 aa28.82■■■□□ 2.2
GCFC2-207ENST00000470503 CDC42BPGQ6DT37 1551 aa28.81■■■□□ 2.2
GCFC2-207ENST00000470503 FNBP4Q8N3X1 1017 aaPredicted RBP28.79■■■□□ 2.2
GCFC2-207ENST00000470503 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
GCFC2-207ENST00000470503 STK26Q9P289 416 aa28.77■■■□□ 2.2
GCFC2-207ENST00000470503 USP21Q9UK80 565 aa28.77■■■□□ 2.2
GCFC2-207ENST00000470503 TRPC5Q9UL62 973 aaPredicted RBP28.77■■■□□ 2.2
GCFC2-207ENST00000470503 PIK3C2GO75747 1445 aa28.75■■■□□ 2.19
GCFC2-207ENST00000470503 WAPLQ7Z5K2 1190 aa28.74■■■□□ 2.19
GCFC2-207ENST00000470503 RGS12O14924 1447 aa28.74■■■□□ 2.19
GCFC2-207ENST00000470503 FOXO3O43524 673 aa28.73■■■□□ 2.19
GCFC2-207ENST00000470503 TMEM132EQ6IEE7 984 aa28.72■■■□□ 2.19
GCFC2-207ENST00000470503 C14orf93Q9H972 538 aaKnown RBP28.71■■■□□ 2.19
GCFC2-207ENST00000470503 COL22A1Q8NFW1 1626 aaPredicted RBP28.71■■■□□ 2.19
GCFC2-207ENST00000470503 MYOM2P54296 1465 aa28.7■■■□□ 2.18
GCFC2-207ENST00000470503 PXDNQ92626 1479 aa28.7■■■□□ 2.18
GCFC2-207ENST00000470503 YTHDC2Q9H6S0 1430 aaKnown RBP28.69■■■□□ 2.18
GCFC2-207ENST00000470503 IFT172Q9UG01 1749 aa28.66■■■□□ 2.18
GCFC2-207ENST00000470503 DHX57Q6P158 1386 aaKnown RBP28.66■■■□□ 2.18
GCFC2-207ENST00000470503 ATAD2Q6PL18 1390 aa28.65■■■□□ 2.18
GCFC2-207ENST00000470503 PLEKHH1Q9ULM0 1364 aa28.65■■■□□ 2.18
GCFC2-207ENST00000470503 ATRNO75882 1429 aa28.65■■■□□ 2.18
GCFC2-207ENST00000470503 KNDC1Q76NI1 1749 aa28.65■■■□□ 2.18
GCFC2-207ENST00000470503 NUTM2FA1L443 756 aa28.63■■■□□ 2.17
GCFC2-207ENST00000470503 NRXN1Q9ULB1 1477 aa28.62■■■□□ 2.17
GCFC2-207ENST00000470503 XPCQ01831 940 aaPredicted RBP28.62■■■□□ 2.17
GCFC2-207ENST00000470503 SPATA31A3Q5VYP0 1347 aa28.61■■■□□ 2.17
GCFC2-207ENST00000470503 PSME1Q06323 249 aa28.59■■■□□ 2.17
GCFC2-207ENST00000470503 BCL9LQ86UU0 1499 aa28.59■■■□□ 2.17
GCFC2-207ENST00000470503 CFAP70Q5T0N1 1121 aa28.58■■■□□ 2.17
GCFC2-207ENST00000470503 KRT28Q7Z3Y7 464 aa28.58■■■□□ 2.17
GCFC2-207ENST00000470503 PHF8Q9UPP1 1060 aa28.57■■■□□ 2.16
GCFC2-207ENST00000470503 KIF1AQ12756 1690 aa28.56■■■□□ 2.16
GCFC2-207ENST00000470503 GJD4Q96KN9 370 aaPredicted RBP28.56■■■□□ 2.16
GCFC2-207ENST00000470503 FMN2Q9NZ56 1722 aa28.55■■■□□ 2.16
GCFC2-207ENST00000470503 CCDC125Q86Z20 511 aa28.55■■■□□ 2.16
GCFC2-207ENST00000470503 STAC3Q96MF2 364 aa28.55■■■□□ 2.16
GCFC2-207ENST00000470503 UNC5CLQ8IV45 518 aa28.53■■■□□ 2.16
GCFC2-207ENST00000470503 PRAM1Q96QH2 718 aa28.52■■■□□ 2.16
GCFC2-207ENST00000470503 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.16
GCFC2-207ENST00000470503 POGKQ9P215 609 aa28.51■■■□□ 2.15
GCFC2-207ENST00000470503 SBNO1A3KN83 1393 aa28.5■■■□□ 2.15
GCFC2-207ENST00000470503 DLC1Q96QB1 1528 aa28.49■■■□□ 2.15
GCFC2-207ENST00000470503 SLIT2O94813 1529 aa28.48■■■□□ 2.15
GCFC2-207ENST00000470503 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
GCFC2-207ENST00000470503 MARF1Q9Y4F3 1742 aaKnown RBP28.47■■■□□ 2.15
GCFC2-207ENST00000470503 ANKARQ7Z5J8 1434 aa28.47■■■□□ 2.15
GCFC2-207ENST00000470503 HRCP23327 699 aa28.47■■■□□ 2.15
GCFC2-207ENST00000470503 HAP1P54257 671 aaPredicted RBP28.47■■■□□ 2.15
GCFC2-207ENST00000470503 ARHGEF10O15013 1369 aa28.47■■■□□ 2.15
GCFC2-207ENST00000470503 SAFB2Q14151 953 aaKnown RBP eCLIP28.44■■■□□ 2.14
GCFC2-207ENST00000470503 EIF3AQ14152 1382 aaKnown RBP28.44■■■□□ 2.14
GCFC2-207ENST00000470503 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.43■■■□□ 2.14
GCFC2-207ENST00000470503 VPS72Q15906 364 aa28.4■■■□□ 2.14
GCFC2-207ENST00000470503 RALGAPBQ86X10 1494 aa28.4■■■□□ 2.14
GCFC2-207ENST00000470503 USP32Q8NFA0 1604 aa28.4■■■□□ 2.14
GCFC2-207ENST00000470503 ADGRB1O14514 1584 aa28.38■■■□□ 2.13
GCFC2-207ENST00000470503 LMOD2Q6P5Q4 547 aa28.38■■■□□ 2.13
GCFC2-207ENST00000470503 DCAF11Q8TEB1 546 aa28.38■■■□□ 2.13
GCFC2-207ENST00000470503 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
GCFC2-207ENST00000470503 TRAK1Q9UPV9 953 aa28.38■■■□□ 2.13
GCFC2-207ENST00000470503 ADGRB2O60241 1585 aa28.37■■■□□ 2.13
GCFC2-207ENST00000470503 PMFBP1Q8TBY8 1022 aa28.36■■■□□ 2.13
GCFC2-207ENST00000470503 CABLES1Q8TDN4 633 aa28.36■■■□□ 2.13
GCFC2-207ENST00000470503 GPRASP1Q5JY77 1395 aa28.36■■■□□ 2.13
GCFC2-207ENST00000470503 ONECUT3O60422 494 aaPredicted RBP28.35■■■□□ 2.13
GCFC2-207ENST00000470503 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
GCFC2-207ENST00000470503 WASLO00401 505 aaPredicted RBP28.34■■■□□ 2.13
GCFC2-207ENST00000470503 GLI3P10071 1580 aa28.32■■■□□ 2.12
GCFC2-207ENST00000470503 RGPD8O14715 1765 aaPredicted RBP28.32■■■□□ 2.12
GCFC2-207ENST00000470503 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
GCFC2-207ENST00000470503 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
GCFC2-207ENST00000470503 MINK1Q8N4C8 1332 aaPredicted RBP28.3■■■□□ 2.12
GCFC2-207ENST00000470503 HIRIP3Q9BW71 556 aaPredicted RBP28.3■■■□□ 2.12
GCFC2-207ENST00000470503 FAM83GA6ND36 823 aa28.29■■■□□ 2.12
GCFC2-207ENST00000470503 CCDC9Q9Y3X0 531 aaKnown RBP28.29■■■□□ 2.12
GCFC2-207ENST00000470503 TULP4Q9NRJ4 1543 aa28.28■■■□□ 2.12
GCFC2-207ENST00000470503 NWD2Q9ULI1 1742 aa28.27■■■□□ 2.12
GCFC2-207ENST00000470503 PRR36Q9H6K5 1346 aa28.27■■■□□ 2.12
GCFC2-207ENST00000470503 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
GCFC2-207ENST00000470503 NGDNQ8NEJ9 315 aaKnown RBP28.26■■■□□ 2.11
GCFC2-207ENST00000470503 PLEKHG5O94827 1062 aa28.24■■■□□ 2.11
GCFC2-207ENST00000470503 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
GCFC2-207ENST00000470503 EP400Q96L91 3159 aa28.21■■■□□ 2.11
GCFC2-207ENST00000470503 BTG4Q9NY30 223 aa28.21■■■□□ 2.11
GCFC2-207ENST00000470503 TRPM3Q9HCF6 1732 aaPredicted RBP28.19■■■□□ 2.1
GCFC2-207ENST00000470503 NUDT16Q96DE0 195 aaKnown RBP28.19■■■□□ 2.1
GCFC2-207ENST00000470503 PLCH1Q4KWH8 1693 aa28.19■■■□□ 2.1
GCFC2-207ENST00000470503 ABCA3Q99758 1704 aa28.18■■■□□ 2.1
GCFC2-207ENST00000470503 PAK3O75914 559 aaPredicted RBP28.17■■■□□ 2.1
GCFC2-207ENST00000470503 ALS2Q96Q42 1657 aa28.16■■■□□ 2.1
GCFC2-207ENST00000470503 A0A0G2JS52 829 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms