RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 HSPA1LP34931 641 aa25.66■■□□□ 1.7
LMNA-211ENST00000470199 DCCP43146 1447 aa25.65■■□□□ 1.7
LMNA-211ENST00000470199 DLC1Q96QB1 1528 aa25.64■■□□□ 1.7
LMNA-211ENST00000470199 MST1RQ04912 1400 aa25.63■■□□□ 1.69
LMNA-211ENST00000470199 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
LMNA-211ENST00000470199 ROBO1Q9Y6N7 1651 aa25.62■■□□□ 1.69
LMNA-211ENST00000470199 POGKQ9P215 609 aa25.62■■□□□ 1.69
LMNA-211ENST00000470199 TRPM1Q7Z4N2 1603 aa25.62■■□□□ 1.69
LMNA-211ENST00000470199 NUTM2FA1L443 756 aa25.58■■□□□ 1.69
LMNA-211ENST00000470199 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
LMNA-211ENST00000470199 BRINP3Q76B58 766 aa25.57■■□□□ 1.68
LMNA-211ENST00000470199 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
LMNA-211ENST00000470199 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
LMNA-211ENST00000470199 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
LMNA-211ENST00000470199 MINK1Q8N4C8 1332 aaPredicted RBP25.56■■□□□ 1.68
LMNA-211ENST00000470199 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
LMNA-211ENST00000470199 ORAI2Q96SN7 254 aa25.54■■□□□ 1.68
LMNA-211ENST00000470199 DDX17Q92841 729 aaKnown RBP25.52■■□□□ 1.68
LMNA-211ENST00000470199 GPRASP1Q5JY77 1395 aa25.5■■□□□ 1.67
LMNA-211ENST00000470199 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
LMNA-211ENST00000470199 FMN2Q9NZ56 1722 aa25.49■■□□□ 1.67
LMNA-211ENST00000470199 ESCO1Q5FWF5 840 aa25.46■■□□□ 1.67
LMNA-211ENST00000470199 CARD11Q9BXL7 1154 aa25.46■■□□□ 1.67
LMNA-211ENST00000470199 TIMELESSQ9UNS1 1208 aa25.46■■□□□ 1.67
LMNA-211ENST00000470199 ADGRB2O60241 1585 aa25.46■■□□□ 1.67
LMNA-211ENST00000470199 CENPJQ9HC77 1338 aaPredicted RBP25.45■■□□□ 1.66
LMNA-211ENST00000470199 PHLPP1O60346 1717 aa25.44■■□□□ 1.66
LMNA-211ENST00000470199 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
LMNA-211ENST00000470199 AHDC1Q5TGY3 1603 aaPredicted RBP25.43■■□□□ 1.66
LMNA-211ENST00000470199 PRR36Q9H6K5 1346 aa25.42■■□□□ 1.66
LMNA-211ENST00000470199 COL16A1Q07092 1604 aaPredicted RBP25.41■■□□□ 1.66
LMNA-211ENST00000470199 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
LMNA-211ENST00000470199 CDK19Q9BWU1 502 aa25.4■■□□□ 1.66
LMNA-211ENST00000470199 RGPD8O14715 1765 aaPredicted RBP25.39■■□□□ 1.66
LMNA-211ENST00000470199 NHSL1Q5SYE7 1610 aa25.39■■□□□ 1.66
LMNA-211ENST00000470199 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.65
LMNA-211ENST00000470199 FOXO3O43524 673 aa25.37■■□□□ 1.65
LMNA-211ENST00000470199 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
LMNA-211ENST00000470199 TULP4Q9NRJ4 1543 aa25.36■■□□□ 1.65
LMNA-211ENST00000470199 PMFBP1Q8TBY8 1022 aa25.35■■□□□ 1.65
LMNA-211ENST00000470199 PHF8Q9UPP1 1060 aa25.35■■□□□ 1.65
LMNA-211ENST00000470199 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
LMNA-211ENST00000470199 NUDT16Q96DE0 195 aaKnown RBP25.34■■□□□ 1.65
LMNA-211ENST00000470199 EIF3AQ14152 1382 aaKnown RBP25.33■■□□□ 1.65
LMNA-211ENST00000470199 CABP2Q9NPB3 220 aa25.33■■□□□ 1.65
LMNA-211ENST00000470199 SOS2Q07890 1332 aaPredicted RBP25.33■■□□□ 1.64
LMNA-211ENST00000470199 ATP7BP35670 1465 aa25.32■■□□□ 1.64
LMNA-211ENST00000470199 PXDNQ92626 1479 aa25.3■■□□□ 1.64
LMNA-211ENST00000470199 SRPK2P78362 688 aaKnown RBP25.3■■□□□ 1.64
LMNA-211ENST00000470199 NPHP3Q7Z494 1330 aa25.3■■□□□ 1.64
LMNA-211ENST00000470199 JCADQ9P266 1359 aa25.3■■□□□ 1.64
LMNA-211ENST00000470199 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
LMNA-211ENST00000470199 KIF1AQ12756 1690 aa25.27■■□□□ 1.64
LMNA-211ENST00000470199 LRRC59Q96AG4 307 aaKnown RBP25.27■■□□□ 1.64
LMNA-211ENST00000470199 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
LMNA-211ENST00000470199 EVC2Q86UK5 1308 aa25.25■■□□□ 1.63
LMNA-211ENST00000470199 USP47Q96K76 1375 aa25.25■■□□□ 1.63
LMNA-211ENST00000470199 TESK2Q96S53 571 aa25.24■■□□□ 1.63
LMNA-211ENST00000470199 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
LMNA-211ENST00000470199 PNPLA6Q8IY17 1366 aa25.23■■□□□ 1.63
LMNA-211ENST00000470199 CCDC61Q9Y6R9 512 aa25.23■■□□□ 1.63
LMNA-211ENST00000470199 SBNO2Q9Y2G9 1366 aa25.22■■□□□ 1.63
LMNA-211ENST00000470199 PSME1Q06323 249 aa25.22■■□□□ 1.63
LMNA-211ENST00000470199 TOPAZ1Q8N9V7 1692 aa25.22■■□□□ 1.63
LMNA-211ENST00000470199 SHPRHQ149N8 1683 aa25.21■■□□□ 1.63
LMNA-211ENST00000470199 NGDNQ8NEJ9 315 aaKnown RBP25.21■■□□□ 1.63
LMNA-211ENST00000470199 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.62
LMNA-211ENST00000470199 LRP6O75581 1613 aa25.19■■□□□ 1.62
LMNA-211ENST00000470199 ACEP12821 1306 aa25.19■■□□□ 1.62
LMNA-211ENST00000470199 PLEKHG3A1L390 1219 aa25.19■■□□□ 1.62
LMNA-211ENST00000470199 NUTM2BA6NNL0 878 aaPredicted RBP25.19■■□□□ 1.62
LMNA-211ENST00000470199 NUTM2EB1AL46 878 aaPredicted RBP25.19■■□□□ 1.62
LMNA-211ENST00000470199 NUTM2AQ8IVF1 878 aaPredicted RBP25.19■■□□□ 1.62
LMNA-211ENST00000470199 CABP1Q9NZU7 370 aa25.19■■□□□ 1.62
LMNA-211ENST00000470199 SPATA31A3Q5VYP0 1347 aa25.18■■□□□ 1.62
LMNA-211ENST00000470199 ITSN1Q15811 1721 aa25.18■■□□□ 1.62
LMNA-211ENST00000470199 SPATA31A6Q5VVP1 1343 aa25.16■■□□□ 1.62
LMNA-211ENST00000470199 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
LMNA-211ENST00000470199 POLR3AO14802 1390 aaPredicted RBP25.15■■□□□ 1.62
LMNA-211ENST00000470199 TRPM3Q9HCF6 1732 aaPredicted RBP25.13■■□□□ 1.61
LMNA-211ENST00000470199 PLEKHG5O94827 1062 aa25.13■■□□□ 1.61
LMNA-211ENST00000470199 SBNO1A3KN83 1393 aa25.13■■□□□ 1.61
LMNA-211ENST00000470199 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
LMNA-211ENST00000470199 LMOD2Q6P5Q4 547 aa25.12■■□□□ 1.61
LMNA-211ENST00000470199 PAK3O75914 559 aaPredicted RBP25.1■■□□□ 1.61
LMNA-211ENST00000470199 HSPA5P11021 654 aaKnown RBP25.1■■□□□ 1.61
LMNA-211ENST00000470199 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
LMNA-211ENST00000470199 COL22A1Q8NFW1 1626 aaPredicted RBP25.09■■□□□ 1.61
LMNA-211ENST00000470199 CABLES1Q8TDN4 633 aa25.09■■□□□ 1.61
LMNA-211ENST00000470199 RGS17Q9UGC6 210 aaPredicted RBP25.08■■□□□ 1.61
LMNA-211ENST00000470199 ADAMTS2O95450 1211 aa25.07■■□□□ 1.6
LMNA-211ENST00000470199 SLC12A5Q9H2X9 1139 aa25.07■■□□□ 1.6
LMNA-211ENST00000470199 EIF4G2P78344 907 aaKnown RBP eCLIP25.06■■□□□ 1.6
LMNA-211ENST00000470199 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
LMNA-211ENST00000470199 TMC1Q8TDI8 760 aa25.06■■□□□ 1.6
LMNA-211ENST00000470199 ALS2Q96Q42 1657 aa25.05■■□□□ 1.6
LMNA-211ENST00000470199 TMF1P82094 1093 aa25.05■■□□□ 1.6
LMNA-211ENST00000470199 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
LMNA-211ENST00000470199 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
LMNA-211ENST00000470199 PUS7Q96PZ0 661 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms