RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
GTF3C2-209ENST00000470115 LRRC59Q96AG4 307 aaKnown RBP23.98■■□□□ 1.43
GTF3C2-209ENST00000470115 DHX57Q6P158 1386 aaKnown RBP23.98■■□□□ 1.43
GTF3C2-209ENST00000470115 SHPRHQ149N8 1683 aa23.96■■□□□ 1.43
GTF3C2-209ENST00000470115 POTEAQ6S8J7 498 aa23.96■■□□□ 1.43
GTF3C2-209ENST00000470115 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
GTF3C2-209ENST00000470115 LRP6O75581 1613 aa23.95■■□□□ 1.43
GTF3C2-209ENST00000470115 SIRT1Q96EB6 747 aa23.95■■□□□ 1.42
GTF3C2-209ENST00000470115 NUTM2BA6NNL0 878 aaPredicted RBP23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 NUTM2EB1AL46 878 aaPredicted RBP23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 NUTM2AQ8IVF1 878 aaPredicted RBP23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 LAMC1P11047 1609 aa23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 CDC42BPGQ6DT37 1551 aa23.94■■□□□ 1.42
GTF3C2-209ENST00000470115 NUTM2FA1L443 756 aa23.93■■□□□ 1.42
GTF3C2-209ENST00000470115 ESCO1Q5FWF5 840 aa23.93■■□□□ 1.42
GTF3C2-209ENST00000470115 STAC3Q96MF2 364 aa23.91■■□□□ 1.42
GTF3C2-209ENST00000470115 SAFB2Q14151 953 aaKnown RBP eCLIP23.9■■□□□ 1.42
GTF3C2-209ENST00000470115 PRAM1Q96QH2 718 aa23.9■■□□□ 1.42
GTF3C2-209ENST00000470115 SOS2Q07890 1332 aaPredicted RBP23.89■■□□□ 1.42
GTF3C2-209ENST00000470115 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.41
GTF3C2-209ENST00000470115 POGKQ9P215 609 aa23.86■■□□□ 1.41
GTF3C2-209ENST00000470115 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
GTF3C2-209ENST00000470115 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
GTF3C2-209ENST00000470115 FOXO3O43524 673 aa23.85■■□□□ 1.41
GTF3C2-209ENST00000470115 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
GTF3C2-209ENST00000470115 XPCQ01831 940 aaPredicted RBP23.83■■□□□ 1.41
GTF3C2-209ENST00000470115 FMN2Q9NZ56 1722 aa23.83■■□□□ 1.41
GTF3C2-209ENST00000470115 DLC1Q96QB1 1528 aa23.83■■□□□ 1.41
GTF3C2-209ENST00000470115 ZNF772Q68DY9 489 aaPredicted RBP23.82■■□□□ 1.4
GTF3C2-209ENST00000470115 PXDNQ92626 1479 aa23.79■■□□□ 1.4
GTF3C2-209ENST00000470115 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
GTF3C2-209ENST00000470115 AFF2P51816 1311 aa23.78■■□□□ 1.4
GTF3C2-209ENST00000470115 ADAMTS2O95450 1211 aa23.77■■□□□ 1.4
GTF3C2-209ENST00000470115 C8orf37Q96NL8 207 aa23.77■■□□□ 1.4
GTF3C2-209ENST00000470115 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
GTF3C2-209ENST00000470115 PHF8Q9UPP1 1060 aa23.75■■□□□ 1.39
GTF3C2-209ENST00000470115 KRT28Q7Z3Y7 464 aa23.74■■□□□ 1.39
GTF3C2-209ENST00000470115 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
GTF3C2-209ENST00000470115 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
GTF3C2-209ENST00000470115 SIN3AQ96ST3 1273 aa23.73■■□□□ 1.39
GTF3C2-209ENST00000470115 KIF1AQ12756 1690 aa23.72■■□□□ 1.39
GTF3C2-209ENST00000470115 ADGRB2O60241 1585 aa23.7■■□□□ 1.38
GTF3C2-209ENST00000470115 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
GTF3C2-209ENST00000470115 L3MBTL2Q969R5 705 aa23.7■■□□□ 1.38
GTF3C2-209ENST00000470115 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.38
GTF3C2-209ENST00000470115 SPATA31A3Q5VYP0 1347 aa23.69■■□□□ 1.38
GTF3C2-209ENST00000470115 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
GTF3C2-209ENST00000470115 RXRBP28702 533 aa23.69■■□□□ 1.38
GTF3C2-209ENST00000470115 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
GTF3C2-209ENST00000470115 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
GTF3C2-209ENST00000470115 NEUROD1Q13562 356 aa23.68■■□□□ 1.38
GTF3C2-209ENST00000470115 QTRT2Q9H974 415 aaKnown RBP23.68■■□□□ 1.38
GTF3C2-209ENST00000470115 USP32Q8NFA0 1604 aa23.67■■□□□ 1.38
GTF3C2-209ENST00000470115 PSME1Q06323 249 aa23.67■■□□□ 1.38
GTF3C2-209ENST00000470115 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
GTF3C2-209ENST00000470115 ARHGEF28Q8N1W1 1705 aaKnown RBP23.66■■□□□ 1.38
GTF3C2-209ENST00000470115 KIAA1210Q9ULL0 1709 aa23.66■■□□□ 1.38
GTF3C2-209ENST00000470115 EIF3AQ14152 1382 aaKnown RBP23.64■■□□□ 1.37
GTF3C2-209ENST00000470115 USP21Q9UK80 565 aa23.63■■□□□ 1.37
GTF3C2-209ENST00000470115 FNBP4Q8N3X1 1017 aaPredicted RBP23.62■■□□□ 1.37
GTF3C2-209ENST00000470115 TULP4Q9NRJ4 1543 aa23.62■■□□□ 1.37
GTF3C2-209ENST00000470115 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
GTF3C2-209ENST00000470115 LMOD2Q6P5Q4 547 aa23.61■■□□□ 1.37
GTF3C2-209ENST00000470115 TNS3Q68CZ2 1445 aa23.6■■□□□ 1.37
GTF3C2-209ENST00000470115 PLEKHG5O94827 1062 aa23.6■■□□□ 1.37
GTF3C2-209ENST00000470115 RBM6P78332 1123 aaKnown RBP23.6■■□□□ 1.37
GTF3C2-209ENST00000470115 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
GTF3C2-209ENST00000470115 NUDT16Q96DE0 195 aaKnown RBP23.59■■□□□ 1.37
GTF3C2-209ENST00000470115 CDK19Q9BWU1 502 aa23.59■■□□□ 1.37
GTF3C2-209ENST00000470115 CABLES1Q8TDN4 633 aa23.58■■□□□ 1.37
GTF3C2-209ENST00000470115 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
GTF3C2-209ENST00000470115 CDK12Q9NYV4 1490 aaPredicted RBP23.56■■□□□ 1.36
GTF3C2-209ENST00000470115 GPRASP1Q5JY77 1395 aa23.56■■□□□ 1.36
GTF3C2-209ENST00000470115 TRPC5Q9UL62 973 aaPredicted RBP23.56■■□□□ 1.36
GTF3C2-209ENST00000470115 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
GTF3C2-209ENST00000470115 MARF1Q9Y4F3 1742 aaKnown RBP23.55■■□□□ 1.36
GTF3C2-209ENST00000470115 ARHGEF10O15013 1369 aa23.54■■□□□ 1.36
GTF3C2-209ENST00000470115 ATP7BP35670 1465 aa23.54■■□□□ 1.36
GTF3C2-209ENST00000470115 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
GTF3C2-209ENST00000470115 BCL9LQ86UU0 1499 aa23.53■■□□□ 1.36
GTF3C2-209ENST00000470115 RGS12O14924 1447 aa23.51■■□□□ 1.35
GTF3C2-209ENST00000470115 ATRNO75882 1429 aa23.51■■□□□ 1.35
GTF3C2-209ENST00000470115 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
GTF3C2-209ENST00000470115 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
GTF3C2-209ENST00000470115 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
GTF3C2-209ENST00000470115 CCDC61Q9Y6R9 512 aa23.49■■□□□ 1.35
GTF3C2-209ENST00000470115 TRPM1Q7Z4N2 1603 aa23.48■■□□□ 1.35
GTF3C2-209ENST00000470115 ITSN1Q15811 1721 aa23.48■■□□□ 1.35
GTF3C2-209ENST00000470115 UPF1Q92900 1129 aaKnown RBP eCLIP23.48■■□□□ 1.35
GTF3C2-209ENST00000470115 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
GTF3C2-209ENST00000470115 UNC5CLQ8IV45 518 aa23.47■■□□□ 1.35
GTF3C2-209ENST00000470115 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
GTF3C2-209ENST00000470115 SLIT2O94813 1529 aa23.47■■□□□ 1.35
GTF3C2-209ENST00000470115 PLEKHG3A1L390 1219 aa23.46■■□□□ 1.35
GTF3C2-209ENST00000470115 ACEP12821 1306 aa23.46■■□□□ 1.35
GTF3C2-209ENST00000470115 ALS2Q96Q42 1657 aa23.46■■□□□ 1.35
GTF3C2-209ENST00000470115 CABP2Q9NPB3 220 aa23.46■■□□□ 1.35
GTF3C2-209ENST00000470115 GJD4Q96KN9 370 aaPredicted RBP23.45■■□□□ 1.34
GTF3C2-209ENST00000470115 FAM83GA6ND36 823 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms