RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 WASHC2AQ641Q2 1341 aa14.54□□□□□ -0.08
THBS3-206ENST00000469769 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
THBS3-206ENST00000469769 PLEKHH1Q9ULM0 1364 aa14.54□□□□□ -0.08
THBS3-206ENST00000469769 NKTRP30414 1462 aaKnown RBP14.54□□□□□ -0.08
THBS3-206ENST00000469769 STRCP1A6NGW2 1772 aa14.53□□□□□ -0.08
THBS3-206ENST00000469769 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
THBS3-206ENST00000469769 TMF1P82094 1093 aa14.53□□□□□ -0.08
THBS3-206ENST00000469769 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
THBS3-206ENST00000469769 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.08
THBS3-206ENST00000469769 KIF7Q2M1P5 1343 aa14.52□□□□□ -0.08
THBS3-206ENST00000469769 POGKQ9P215 609 aa14.52□□□□□ -0.09
THBS3-206ENST00000469769 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
THBS3-206ENST00000469769 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
THBS3-206ENST00000469769 CDCA8Q53HL2 280 aa14.5□□□□□ -0.09
THBS3-206ENST00000469769 EVC2Q86UK5 1308 aa14.48□□□□□ -0.09
THBS3-206ENST00000469769 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.09
THBS3-206ENST00000469769 MINK1Q8N4C8 1332 aaPredicted RBP14.45□□□□□ -0.1
THBS3-206ENST00000469769 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
THBS3-206ENST00000469769 ADGRL3Q9HAR2 1447 aa14.45□□□□□ -0.1
THBS3-206ENST00000469769 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
THBS3-206ENST00000469769 CDC42BPGQ6DT37 1551 aa14.44□□□□□ -0.1
THBS3-206ENST00000469769 CDK19Q9BWU1 502 aa14.44□□□□□ -0.1
THBS3-206ENST00000469769 ZNF335Q9H4Z2 1342 aaPredicted RBP14.43□□□□□ -0.1
THBS3-206ENST00000469769 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
THBS3-206ENST00000469769 MYOM1P52179 1685 aa14.43□□□□□ -0.1
THBS3-206ENST00000469769 LRRC7Q96NW7 1537 aa14.43□□□□□ -0.1
THBS3-206ENST00000469769 ATAD2Q6PL18 1390 aa14.43□□□□□ -0.1
THBS3-206ENST00000469769 NINLQ9Y2I6 1382 aa14.43□□□□□ -0.1
THBS3-206ENST00000469769 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
THBS3-206ENST00000469769 PROSER2Q86WR7 435 aaPredicted RBP14.42□□□□□ -0.1
THBS3-206ENST00000469769 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
THBS3-206ENST00000469769 DCCP43146 1447 aa14.41□□□□□ -0.1
THBS3-206ENST00000469769 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
THBS3-206ENST00000469769 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
THBS3-206ENST00000469769 ATP7BP35670 1465 aa14.4□□□□□ -0.1
THBS3-206ENST00000469769 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
THBS3-206ENST00000469769 USP32Q8NFA0 1604 aa14.4□□□□□ -0.1
THBS3-206ENST00000469769 ANKARQ7Z5J8 1434 aa14.4□□□□□ -0.1
THBS3-206ENST00000469769 DDX10Q13206 875 aaKnown RBP14.39□□□□□ -0.11
THBS3-206ENST00000469769 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
THBS3-206ENST00000469769 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
THBS3-206ENST00000469769 PRR36Q9H6K5 1346 aa14.39□□□□□ -0.11
THBS3-206ENST00000469769 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
THBS3-206ENST00000469769 SRPK2P78362 688 aaKnown RBP14.38□□□□□ -0.11
THBS3-206ENST00000469769 NUDT16Q96DE0 195 aaKnown RBP14.38□□□□□ -0.11
THBS3-206ENST00000469769 CD163L1Q9NR16 1453 aa14.37□□□□□ -0.11
THBS3-206ENST00000469769 PLEKHG3A1L390 1219 aa14.36□□□□□ -0.11
THBS3-206ENST00000469769 RBM33Q96EV2 1170 aaKnown RBP14.36□□□□□ -0.11
THBS3-206ENST00000469769 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
THBS3-206ENST00000469769 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
THBS3-206ENST00000469769 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
THBS3-206ENST00000469769 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
THBS3-206ENST00000469769 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
THBS3-206ENST00000469769 PANK3Q9H999 370 aa14.34□□□□□ -0.11
THBS3-206ENST00000469769 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
THBS3-206ENST00000469769 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
THBS3-206ENST00000469769 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.12
THBS3-206ENST00000469769 MSH6P52701 1360 aa14.33□□□□□ -0.12
THBS3-206ENST00000469769 NPC1L1Q9UHC9 1359 aa14.33□□□□□ -0.12
THBS3-206ENST00000469769 MST1RQ04912 1400 aa14.32□□□□□ -0.12
THBS3-206ENST00000469769 PPIP5K1Q6PFW1 1433 aa14.32□□□□□ -0.12
THBS3-206ENST00000469769 CARD14Q9BXL6 1004 aa14.32□□□□□ -0.12
THBS3-206ENST00000469769 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
THBS3-206ENST00000469769 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
THBS3-206ENST00000469769 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
THBS3-206ENST00000469769 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
THBS3-206ENST00000469769 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
THBS3-206ENST00000469769 TMC1Q8TDI8 760 aa14.3□□□□□ -0.12
THBS3-206ENST00000469769 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
THBS3-206ENST00000469769 TERF2IPQ9NYB0 399 aa14.3□□□□□ -0.12
THBS3-206ENST00000469769 A0A1W2PP64 1363 aa14.3□□□□□ -0.12
THBS3-206ENST00000469769 MON2Q7Z3U7 1717 aa14.29□□□□□ -0.12
THBS3-206ENST00000469769 ATF3P18847 181 aa14.29□□□□□ -0.12
THBS3-206ENST00000469769 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
THBS3-206ENST00000469769 SSH2Q76I76 1423 aa14.29□□□□□ -0.12
THBS3-206ENST00000469769 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
THBS3-206ENST00000469769 BRD4O60885 1362 aaPredicted RBP14.27□□□□□ -0.12
THBS3-206ENST00000469769 ACEP12821 1306 aa14.27□□□□□ -0.12
THBS3-206ENST00000469769 KIF1AQ12756 1690 aa14.26□□□□□ -0.13
THBS3-206ENST00000469769 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
THBS3-206ENST00000469769 NUTM2FA1L443 756 aa14.26□□□□□ -0.13
THBS3-206ENST00000469769 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
THBS3-206ENST00000469769 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
THBS3-206ENST00000469769 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
THBS3-206ENST00000469769 USP6P35125 1406 aa14.25□□□□□ -0.13
THBS3-206ENST00000469769 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
THBS3-206ENST00000469769 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
THBS3-206ENST00000469769 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
THBS3-206ENST00000469769 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
THBS3-206ENST00000469769 SLAIN2Q9P270 581 aa14.24□□□□□ -0.13
THBS3-206ENST00000469769 NSD2O96028 1365 aa14.23□□□□□ -0.13
THBS3-206ENST00000469769 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
THBS3-206ENST00000469769 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
THBS3-206ENST00000469769 PMFBP1Q8TBY8 1022 aa14.22□□□□□ -0.13
THBS3-206ENST00000469769 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
THBS3-206ENST00000469769 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.13
THBS3-206ENST00000469769 FYB1O15117 783 aa14.21□□□□□ -0.13
THBS3-206ENST00000469769 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
THBS3-206ENST00000469769 TTC21BQ7Z4L5 1316 aa14.2□□□□□ -0.14
THBS3-206ENST00000469769 TTC21AQ8NDW8 1320 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms