RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
LMNA-210ENST00000469565 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
LMNA-210ENST00000469565 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
LMNA-210ENST00000469565 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
LMNA-210ENST00000469565 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
LMNA-210ENST00000469565 ABCC11Q96J66 1382 aa19.33■□□□□ 0.69
LMNA-210ENST00000469565 SAFB2Q14151 953 aaKnown RBP eCLIP19.33■□□□□ 0.68
LMNA-210ENST00000469565 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
LMNA-210ENST00000469565 POGKQ9P215 609 aa19.33■□□□□ 0.68
LMNA-210ENST00000469565 KNDC1Q76NI1 1749 aa19.33■□□□□ 0.68
LMNA-210ENST00000469565 LRP6O75581 1613 aa19.33■□□□□ 0.68
LMNA-210ENST00000469565 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
LMNA-210ENST00000469565 NCOA3Q9Y6Q9 1424 aa19.32■□□□□ 0.68
LMNA-210ENST00000469565 RXRBP28702 533 aa19.31■□□□□ 0.68
LMNA-210ENST00000469565 PRAM1Q96QH2 718 aa19.31■□□□□ 0.68
LMNA-210ENST00000469565 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
LMNA-210ENST00000469565 CADPS2Q86UW7 1296 aa19.29■□□□□ 0.68
LMNA-210ENST00000469565 ARHGEF28Q8N1W1 1705 aaKnown RBP19.28■□□□□ 0.68
LMNA-210ENST00000469565 TECPR2O15040 1411 aa19.28■□□□□ 0.68
LMNA-210ENST00000469565 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
LMNA-210ENST00000469565 ATF3P18847 181 aa19.28■□□□□ 0.68
LMNA-210ENST00000469565 GPRASP1Q5JY77 1395 aa19.28■□□□□ 0.68
LMNA-210ENST00000469565 PLEKHH1Q9ULM0 1364 aa19.28■□□□□ 0.68
LMNA-210ENST00000469565 SHPRHQ149N8 1683 aa19.27■□□□□ 0.68
LMNA-210ENST00000469565 SIRT1Q96EB6 747 aa19.27■□□□□ 0.68
LMNA-210ENST00000469565 C19orf44Q9H6X5 657 aa19.27■□□□□ 0.68
LMNA-210ENST00000469565 DLC1Q96QB1 1528 aa19.26■□□□□ 0.67
LMNA-210ENST00000469565 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
LMNA-210ENST00000469565 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
LMNA-210ENST00000469565 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
LMNA-210ENST00000469565 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
LMNA-210ENST00000469565 CENPJQ9HC77 1338 aaPredicted RBP19.24■□□□□ 0.67
LMNA-210ENST00000469565 CDK12Q9NYV4 1490 aaPredicted RBP19.23■□□□□ 0.67
LMNA-210ENST00000469565 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
LMNA-210ENST00000469565 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
LMNA-210ENST00000469565 NUTM2AQ8IVF1 878 aaPredicted RBP19.23■□□□□ 0.67
LMNA-210ENST00000469565 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
LMNA-210ENST00000469565 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
LMNA-210ENST00000469565 QRICH2Q9H0J4 1663 aa19.2■□□□□ 0.66
LMNA-210ENST00000469565 USP47Q96K76 1375 aa19.2■□□□□ 0.66
LMNA-210ENST00000469565 ADGRL3Q9HAR2 1447 aa19.19■□□□□ 0.66
LMNA-210ENST00000469565 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
LMNA-210ENST00000469565 BRINP3Q76B58 766 aa19.19■□□□□ 0.66
LMNA-210ENST00000469565 AFF2P51816 1311 aa19.19■□□□□ 0.66
LMNA-210ENST00000469565 EIF4G2P78344 907 aaKnown RBP eCLIP19.18■□□□□ 0.66
LMNA-210ENST00000469565 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
LMNA-210ENST00000469565 HSPA5P11021 654 aaKnown RBP19.16■□□□□ 0.66
LMNA-210ENST00000469565 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
LMNA-210ENST00000469565 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
LMNA-210ENST00000469565 LRRC59Q96AG4 307 aaKnown RBP19.13■□□□□ 0.65
LMNA-210ENST00000469565 WASLO00401 505 aaPredicted RBP19.12■□□□□ 0.65
LMNA-210ENST00000469565 CDK19Q9BWU1 502 aa19.12■□□□□ 0.65
LMNA-210ENST00000469565 DCCP43146 1447 aa19.11■□□□□ 0.65
LMNA-210ENST00000469565 SRPK2P78362 688 aaKnown RBP19.11■□□□□ 0.65
LMNA-210ENST00000469565 C8orf37Q96NL8 207 aa19.11■□□□□ 0.65
LMNA-210ENST00000469565 RGPD8O14715 1765 aaPredicted RBP19.11■□□□□ 0.65
LMNA-210ENST00000469565 RGS12O14924 1447 aa19.1■□□□□ 0.65
LMNA-210ENST00000469565 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
LMNA-210ENST00000469565 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
LMNA-210ENST00000469565 FMN2Q9NZ56 1722 aa19.09■□□□□ 0.65
LMNA-210ENST00000469565 CABP2Q9NPB3 220 aa19.09■□□□□ 0.65
LMNA-210ENST00000469565 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
LMNA-210ENST00000469565 NHSL1Q5SYE7 1610 aa19.08■□□□□ 0.65
LMNA-210ENST00000469565 TESK2Q96S53 571 aa19.08■□□□□ 0.64
LMNA-210ENST00000469565 TMF1P82094 1093 aa19.07■□□□□ 0.64
LMNA-210ENST00000469565 NGLY1Q96IV0 654 aa19.07■□□□□ 0.64
LMNA-210ENST00000469565 MST1RQ04912 1400 aa19.07■□□□□ 0.64
LMNA-210ENST00000469565 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
LMNA-210ENST00000469565 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
LMNA-210ENST00000469565 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
LMNA-210ENST00000469565 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
LMNA-210ENST00000469565 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
LMNA-210ENST00000469565 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
LMNA-210ENST00000469565 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
LMNA-210ENST00000469565 PNPLA6Q8IY17 1366 aa19.04■□□□□ 0.64
LMNA-210ENST00000469565 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
LMNA-210ENST00000469565 ATAD2Q6PL18 1390 aa19.03■□□□□ 0.64
LMNA-210ENST00000469565 PRR36Q9H6K5 1346 aa19.02■□□□□ 0.64
LMNA-210ENST00000469565 DDX17Q92841 729 aaKnown RBP19.02■□□□□ 0.64
LMNA-210ENST00000469565 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
LMNA-210ENST00000469565 PMFBP1Q8TBY8 1022 aa19.01■□□□□ 0.63
LMNA-210ENST00000469565 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
LMNA-210ENST00000469565 USP32Q8NFA0 1604 aa19■□□□□ 0.63
LMNA-210ENST00000469565 CDCA8Q53HL2 280 aa19■□□□□ 0.63
LMNA-210ENST00000469565 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
LMNA-210ENST00000469565 ITSN1Q15811 1721 aa19■□□□□ 0.63
LMNA-210ENST00000469565 ANKARQ7Z5J8 1434 aa19■□□□□ 0.63
LMNA-210ENST00000469565 TMC1Q8TDI8 760 aa18.99■□□□□ 0.63
LMNA-210ENST00000469565 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
LMNA-210ENST00000469565 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
LMNA-210ENST00000469565 USP21Q9UK80 565 aa18.98■□□□□ 0.63
LMNA-210ENST00000469565 ATP7BP35670 1465 aa18.97■□□□□ 0.63
LMNA-210ENST00000469565 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
LMNA-210ENST00000469565 CABP1Q9NZU7 370 aa18.97■□□□□ 0.63
LMNA-210ENST00000469565 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
LMNA-210ENST00000469565 FOXO3O43524 673 aa18.96■□□□□ 0.63
LMNA-210ENST00000469565 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
LMNA-210ENST00000469565 C11orf95C9JLR9 678 aaPredicted RBP18.95■□□□□ 0.62
LMNA-210ENST00000469565 PUS7Q96PZ0 661 aaKnown RBP18.94■□□□□ 0.62
LMNA-210ENST00000469565 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms