RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 ATF3P18847 181 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 SIRT1Q96EB6 747 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
MCF2L-222ENST00000469558 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.3
MCF2L-222ENST00000469558 ADGRB2O60241 1585 aa16.95■□□□□ 0.3
MCF2L-222ENST00000469558 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
MCF2L-222ENST00000469558 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-222ENST00000469558 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
MCF2L-222ENST00000469558 NBPF1Q3BBV0 1214 aa16.92■□□□□ 0.3
MCF2L-222ENST00000469558 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
MCF2L-222ENST00000469558 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
MCF2L-222ENST00000469558 USP32Q8NFA0 1604 aa16.91■□□□□ 0.3
MCF2L-222ENST00000469558 TRAK1Q9UPV9 953 aa16.9■□□□□ 0.3
MCF2L-222ENST00000469558 ORAI2Q96SN7 254 aa16.89■□□□□ 0.29
MCF2L-222ENST00000469558 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
MCF2L-222ENST00000469558 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
MCF2L-222ENST00000469558 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
MCF2L-222ENST00000469558 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
MCF2L-222ENST00000469558 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-222ENST00000469558 PXDNQ92626 1479 aa16.85■□□□□ 0.29
MCF2L-222ENST00000469558 LRP6O75581 1613 aa16.84■□□□□ 0.29
MCF2L-222ENST00000469558 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.28
MCF2L-222ENST00000469558 JCADQ9P266 1359 aa16.83■□□□□ 0.28
MCF2L-222ENST00000469558 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
MCF2L-222ENST00000469558 TULP4Q9NRJ4 1543 aa16.82■□□□□ 0.28
MCF2L-222ENST00000469558 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
MCF2L-222ENST00000469558 POGKQ9P215 609 aa16.82■□□□□ 0.28
MCF2L-222ENST00000469558 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
MCF2L-222ENST00000469558 ANKARQ7Z5J8 1434 aa16.81■□□□□ 0.28
MCF2L-222ENST00000469558 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
MCF2L-222ENST00000469558 SOS2Q07890 1332 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-222ENST00000469558 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-222ENST00000469558 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
MCF2L-222ENST00000469558 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-222ENST00000469558 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
MCF2L-222ENST00000469558 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
MCF2L-222ENST00000469558 ATP7BP35670 1465 aa16.8■□□□□ 0.28
MCF2L-222ENST00000469558 PNPLA6Q8IY17 1366 aa16.79■□□□□ 0.28
MCF2L-222ENST00000469558 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
MCF2L-222ENST00000469558 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
MCF2L-222ENST00000469558 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-222ENST00000469558 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
MCF2L-222ENST00000469558 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
MCF2L-222ENST00000469558 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
MCF2L-222ENST00000469558 FOXO3O43524 673 aa16.75■□□□□ 0.27
MCF2L-222ENST00000469558 RGS17Q9UGC6 210 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-222ENST00000469558 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
MCF2L-222ENST00000469558 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-222ENST00000469558 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-222ENST00000469558 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
MCF2L-222ENST00000469558 SPATA31A6Q5VVP1 1343 aa16.73■□□□□ 0.27
MCF2L-222ENST00000469558 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-222ENST00000469558 ILDR2Q71H61 639 aa16.73■□□□□ 0.27
MCF2L-222ENST00000469558 LRRC59Q96AG4 307 aaKnown RBP16.73■□□□□ 0.27
MCF2L-222ENST00000469558 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
MCF2L-222ENST00000469558 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
MCF2L-222ENST00000469558 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
MCF2L-222ENST00000469558 ALS2Q96Q42 1657 aa16.69■□□□□ 0.26
MCF2L-222ENST00000469558 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
MCF2L-222ENST00000469558 ABCA3Q99758 1704 aa16.68■□□□□ 0.26
MCF2L-222ENST00000469558 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
MCF2L-222ENST00000469558 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
MCF2L-222ENST00000469558 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
MCF2L-222ENST00000469558 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
MCF2L-222ENST00000469558 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
MCF2L-222ENST00000469558 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-222ENST00000469558 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
MCF2L-222ENST00000469558 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
MCF2L-222ENST00000469558 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
MCF2L-222ENST00000469558 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
MCF2L-222ENST00000469558 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
MCF2L-222ENST00000469558 MARF1Q9Y4F3 1742 aaKnown RBP16.64■□□□□ 0.25
MCF2L-222ENST00000469558 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
MCF2L-222ENST00000469558 NUTM2BA6NNL0 878 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-222ENST00000469558 NUTM2EB1AL46 878 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-222ENST00000469558 POTEAQ6S8J7 498 aa16.63■□□□□ 0.25
MCF2L-222ENST00000469558 NUTM2AQ8IVF1 878 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-222ENST00000469558 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
MCF2L-222ENST00000469558 CCER1Q8TC90 406 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-222ENST00000469558 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-222ENST00000469558 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
MCF2L-222ENST00000469558 PSME1Q06323 249 aa16.6■□□□□ 0.25
MCF2L-222ENST00000469558 TESK2Q96S53 571 aa16.6■□□□□ 0.25
MCF2L-222ENST00000469558 ACEP12821 1306 aa16.6■□□□□ 0.25
MCF2L-222ENST00000469558 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
MCF2L-222ENST00000469558 SRPK2P78362 688 aaKnown RBP16.59■□□□□ 0.25
MCF2L-222ENST00000469558 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
MCF2L-222ENST00000469558 SSH2Q76I76 1423 aa16.58■□□□□ 0.24
MCF2L-222ENST00000469558 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
MCF2L-222ENST00000469558 AKAP12Q02952 1782 aa16.58■□□□□ 0.24
MCF2L-222ENST00000469558 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
MCF2L-222ENST00000469558 USP47Q96K76 1375 aa16.57■□□□□ 0.24
MCF2L-222ENST00000469558 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
MCF2L-222ENST00000469558 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
MCF2L-222ENST00000469558 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
MCF2L-222ENST00000469558 AFF2P51816 1311 aa16.56■□□□□ 0.24
MCF2L-222ENST00000469558 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
MCF2L-222ENST00000469558 MEX3CQ5U5Q3 659 aaKnown RBP16.56■□□□□ 0.24
MCF2L-222ENST00000469558 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms