RNA–Protein interactions for RNA: ENST00000469205.2

UBE2A-204, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2

Gene UBE2A, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-204ENST00000469205 KNDC1Q76NI1 1749 aa17.38■□□□□ 0.37
UBE2A-204ENST00000469205 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
UBE2A-204ENST00000469205 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
UBE2A-204ENST00000469205 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
UBE2A-204ENST00000469205 SOCS7O14512 581 aa17.34■□□□□ 0.37
UBE2A-204ENST00000469205 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
UBE2A-204ENST00000469205 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
UBE2A-204ENST00000469205 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
UBE2A-204ENST00000469205 CENPJQ9HC77 1338 aaPredicted RBP17.33■□□□□ 0.36
UBE2A-204ENST00000469205 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
UBE2A-204ENST00000469205 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
UBE2A-204ENST00000469205 MST1RQ04912 1400 aa17.31■□□□□ 0.36
UBE2A-204ENST00000469205 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.31■□□□□ 0.36
UBE2A-204ENST00000469205 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
UBE2A-204ENST00000469205 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
UBE2A-204ENST00000469205 CDC42BPGQ6DT37 1551 aa17.29■□□□□ 0.36
UBE2A-204ENST00000469205 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
UBE2A-204ENST00000469205 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
UBE2A-204ENST00000469205 C1orf167Q5SNV9 1468 aa17.29■□□□□ 0.36
UBE2A-204ENST00000469205 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
UBE2A-204ENST00000469205 SAFB2Q14151 953 aaKnown RBP eCLIP17.28■□□□□ 0.36
UBE2A-204ENST00000469205 ANKARQ7Z5J8 1434 aa17.28■□□□□ 0.36
UBE2A-204ENST00000469205 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
UBE2A-204ENST00000469205 ADGRB2O60241 1585 aa17.26■□□□□ 0.35
UBE2A-204ENST00000469205 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
UBE2A-204ENST00000469205 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
UBE2A-204ENST00000469205 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
UBE2A-204ENST00000469205 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
UBE2A-204ENST00000469205 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
UBE2A-204ENST00000469205 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
UBE2A-204ENST00000469205 HSPA1LP34931 641 aa17.23■□□□□ 0.35
UBE2A-204ENST00000469205 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
UBE2A-204ENST00000469205 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
UBE2A-204ENST00000469205 LRRC59Q96AG4 307 aaKnown RBP17.22■□□□□ 0.35
UBE2A-204ENST00000469205 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
UBE2A-204ENST00000469205 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
UBE2A-204ENST00000469205 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
UBE2A-204ENST00000469205 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
UBE2A-204ENST00000469205 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
UBE2A-204ENST00000469205 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
UBE2A-204ENST00000469205 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
UBE2A-204ENST00000469205 EIF4G2P78344 907 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE2A-204ENST00000469205 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
UBE2A-204ENST00000469205 PSME1Q06323 249 aa17.19■□□□□ 0.34
UBE2A-204ENST00000469205 CDCA8Q53HL2 280 aa17.19■□□□□ 0.34
UBE2A-204ENST00000469205 TESK2Q96S53 571 aa17.19■□□□□ 0.34
UBE2A-204ENST00000469205 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
UBE2A-204ENST00000469205 USP47Q96K76 1375 aa17.18■□□□□ 0.34
UBE2A-204ENST00000469205 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
UBE2A-204ENST00000469205 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
UBE2A-204ENST00000469205 AHDC1Q5TGY3 1603 aaPredicted RBP17.17■□□□□ 0.34
UBE2A-204ENST00000469205 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
UBE2A-204ENST00000469205 FOXO3O43524 673 aa17.16■□□□□ 0.34
UBE2A-204ENST00000469205 TMF1P82094 1093 aa17.16■□□□□ 0.34
UBE2A-204ENST00000469205 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
UBE2A-204ENST00000469205 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
UBE2A-204ENST00000469205 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
UBE2A-204ENST00000469205 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
UBE2A-204ENST00000469205 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
UBE2A-204ENST00000469205 JCADQ9P266 1359 aa17.15■□□□□ 0.34
UBE2A-204ENST00000469205 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
UBE2A-204ENST00000469205 KRT28Q7Z3Y7 464 aa17.13■□□□□ 0.33
UBE2A-204ENST00000469205 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
UBE2A-204ENST00000469205 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
UBE2A-204ENST00000469205 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
UBE2A-204ENST00000469205 POLR3AO14802 1390 aaPredicted RBP17.12■□□□□ 0.33
UBE2A-204ENST00000469205 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
UBE2A-204ENST00000469205 ATP7BP35670 1465 aa17.12■□□□□ 0.33
UBE2A-204ENST00000469205 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
UBE2A-204ENST00000469205 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
UBE2A-204ENST00000469205 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
UBE2A-204ENST00000469205 ACEP12821 1306 aa17.09■□□□□ 0.33
UBE2A-204ENST00000469205 QRICH2Q9H0J4 1663 aa17.09■□□□□ 0.33
UBE2A-204ENST00000469205 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
UBE2A-204ENST00000469205 NHSL1Q5SYE7 1610 aa17.07■□□□□ 0.32
UBE2A-204ENST00000469205 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
UBE2A-204ENST00000469205 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
UBE2A-204ENST00000469205 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
UBE2A-204ENST00000469205 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
UBE2A-204ENST00000469205 PXDNQ92626 1479 aa17.06■□□□□ 0.32
UBE2A-204ENST00000469205 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
UBE2A-204ENST00000469205 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
UBE2A-204ENST00000469205 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
UBE2A-204ENST00000469205 PHLPP1O60346 1717 aa17.05■□□□□ 0.32
UBE2A-204ENST00000469205 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
UBE2A-204ENST00000469205 CPSF1Q10570 1443 aaKnown RBP17.03■□□□□ 0.32
UBE2A-204ENST00000469205 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.32
UBE2A-204ENST00000469205 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
UBE2A-204ENST00000469205 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
UBE2A-204ENST00000469205 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
UBE2A-204ENST00000469205 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
UBE2A-204ENST00000469205 TTC21AQ8NDW8 1320 aa17■□□□□ 0.31
UBE2A-204ENST00000469205 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
UBE2A-204ENST00000469205 TOPAZ1Q8N9V7 1692 aa16.98■□□□□ 0.31
UBE2A-204ENST00000469205 USP6P35125 1406 aa16.98■□□□□ 0.31
UBE2A-204ENST00000469205 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
UBE2A-204ENST00000469205 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
UBE2A-204ENST00000469205 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
UBE2A-204ENST00000469205 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
UBE2A-204ENST00000469205 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms