RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
SNU13-206ENST00000469028 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
SNU13-206ENST00000469028 TRPM1Q7Z4N2 1603 aa15.85■□□□□ 0.13
SNU13-206ENST00000469028 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
SNU13-206ENST00000469028 ARHGEF28Q8N1W1 1705 aaKnown RBP15.84■□□□□ 0.13
SNU13-206ENST00000469028 NBPF8Q3BBV2 869 aa15.83■□□□□ 0.12
SNU13-206ENST00000469028 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNU13-206ENST00000469028 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
SNU13-206ENST00000469028 CLSPNQ9HAW4 1339 aa15.8■□□□□ 0.12
SNU13-206ENST00000469028 BRINP3Q76B58 766 aa15.8■□□□□ 0.12
SNU13-206ENST00000469028 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
SNU13-206ENST00000469028 POGKQ9P215 609 aa15.79■□□□□ 0.12
SNU13-206ENST00000469028 FMN2Q9NZ56 1722 aa15.79■□□□□ 0.12
SNU13-206ENST00000469028 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
SNU13-206ENST00000469028 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
SNU13-206ENST00000469028 PHLPP1O60346 1717 aa15.77■□□□□ 0.11
SNU13-206ENST00000469028 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
SNU13-206ENST00000469028 GPRASP1Q5JY77 1395 aa15.76■□□□□ 0.11
SNU13-206ENST00000469028 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
SNU13-206ENST00000469028 CCER1Q8TC90 406 aaPredicted RBP15.76■□□□□ 0.11
SNU13-206ENST00000469028 ORAI2Q96SN7 254 aa15.76■□□□□ 0.11
SNU13-206ENST00000469028 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
SNU13-206ENST00000469028 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
SNU13-206ENST00000469028 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
SNU13-206ENST00000469028 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
SNU13-206ENST00000469028 USP32Q8NFA0 1604 aa15.73■□□□□ 0.11
SNU13-206ENST00000469028 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
SNU13-206ENST00000469028 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
SNU13-206ENST00000469028 RGPD8O14715 1765 aaPredicted RBP15.71■□□□□ 0.11
SNU13-206ENST00000469028 CENPJQ9HC77 1338 aaPredicted RBP15.7■□□□□ 0.1
SNU13-206ENST00000469028 TULP4Q9NRJ4 1543 aa15.7■□□□□ 0.1
SNU13-206ENST00000469028 WASLO00401 505 aaPredicted RBP15.7■□□□□ 0.1
SNU13-206ENST00000469028 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
SNU13-206ENST00000469028 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
SNU13-206ENST00000469028 PRR36Q9H6K5 1346 aa15.69■□□□□ 0.1
SNU13-206ENST00000469028 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
SNU13-206ENST00000469028 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
SNU13-206ENST00000469028 KIF1AQ12756 1690 aa15.67■□□□□ 0.1
SNU13-206ENST00000469028 ATP7BP35670 1465 aa15.67■□□□□ 0.1
SNU13-206ENST00000469028 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
SNU13-206ENST00000469028 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
SNU13-206ENST00000469028 PXDNQ92626 1479 aa15.66■□□□□ 0.1
SNU13-206ENST00000469028 EIF3AQ14152 1382 aaKnown RBP15.66■□□□□ 0.1
SNU13-206ENST00000469028 JCADQ9P266 1359 aa15.66■□□□□ 0.1
SNU13-206ENST00000469028 SHPRHQ149N8 1683 aa15.65■□□□□ 0.1
SNU13-206ENST00000469028 CDK19Q9BWU1 502 aa15.65■□□□□ 0.1
SNU13-206ENST00000469028 FOXO3O43524 673 aa15.64■□□□□ 0.09
SNU13-206ENST00000469028 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
SNU13-206ENST00000469028 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
SNU13-206ENST00000469028 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
SNU13-206ENST00000469028 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
SNU13-206ENST00000469028 PMFBP1Q8TBY8 1022 aa15.62■□□□□ 0.09
SNU13-206ENST00000469028 NUDT16Q96DE0 195 aaKnown RBP15.62■□□□□ 0.09
SNU13-206ENST00000469028 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
SNU13-206ENST00000469028 SBNO2Q9Y2G9 1366 aa15.62■□□□□ 0.09
SNU13-206ENST00000469028 ITSN1Q15811 1721 aa15.61■□□□□ 0.09
SNU13-206ENST00000469028 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
SNU13-206ENST00000469028 LRP6O75581 1613 aa15.61■□□□□ 0.09
SNU13-206ENST00000469028 CABP2Q9NPB3 220 aa15.6■□□□□ 0.09
SNU13-206ENST00000469028 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
SNU13-206ENST00000469028 KRT28Q7Z3Y7 464 aa15.58■□□□□ 0.08
SNU13-206ENST00000469028 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
SNU13-206ENST00000469028 EVC2Q86UK5 1308 aa15.58■□□□□ 0.08
SNU13-206ENST00000469028 COL22A1Q8NFW1 1626 aaPredicted RBP15.57■□□□□ 0.08
SNU13-206ENST00000469028 CCDC61Q9Y6R9 512 aa15.57■□□□□ 0.08
SNU13-206ENST00000469028 USP47Q96K76 1375 aa15.57■□□□□ 0.08
SNU13-206ENST00000469028 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
SNU13-206ENST00000469028 TRPM3Q9HCF6 1732 aaPredicted RBP15.57■□□□□ 0.08
SNU13-206ENST00000469028 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
SNU13-206ENST00000469028 TESK2Q96S53 571 aa15.56■□□□□ 0.08
SNU13-206ENST00000469028 SPATA31A3Q5VYP0 1347 aa15.56■□□□□ 0.08
SNU13-206ENST00000469028 PPIP5K1Q6PFW1 1433 aa15.56■□□□□ 0.08
SNU13-206ENST00000469028 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
SNU13-206ENST00000469028 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
SNU13-206ENST00000469028 POLR3AO14802 1390 aaPredicted RBP15.55■□□□□ 0.08
SNU13-206ENST00000469028 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
SNU13-206ENST00000469028 PSME1Q06323 249 aa15.54■□□□□ 0.08
SNU13-206ENST00000469028 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
SNU13-206ENST00000469028 ACEP12821 1306 aa15.53■□□□□ 0.08
SNU13-206ENST00000469028 NUTM2BA6NNL0 878 aaPredicted RBP15.53■□□□□ 0.08
SNU13-206ENST00000469028 NUTM2EB1AL46 878 aaPredicted RBP15.53■□□□□ 0.08
SNU13-206ENST00000469028 NUTM2AQ8IVF1 878 aaPredicted RBP15.53■□□□□ 0.08
SNU13-206ENST00000469028 ALS2Q96Q42 1657 aa15.52■□□□□ 0.08
SNU13-206ENST00000469028 CABP1Q9NZU7 370 aa15.51■□□□□ 0.07
SNU13-206ENST00000469028 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
SNU13-206ENST00000469028 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
SNU13-206ENST00000469028 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
SNU13-206ENST00000469028 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
SNU13-206ENST00000469028 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
SNU13-206ENST00000469028 USP6P35125 1406 aa15.47■□□□□ 0.07
SNU13-206ENST00000469028 MEX3CQ5U5Q3 659 aaKnown RBP15.47■□□□□ 0.07
SNU13-206ENST00000469028 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
SNU13-206ENST00000469028 CD163L1Q9NR16 1453 aa15.46■□□□□ 0.07
SNU13-206ENST00000469028 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.07
SNU13-206ENST00000469028 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
SNU13-206ENST00000469028 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
SNU13-206ENST00000469028 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
SNU13-206ENST00000469028 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
SNU13-206ENST00000469028 LMOD2Q6P5Q4 547 aa15.46■□□□□ 0.07
SNU13-206ENST00000469028 CABLES1Q8TDN4 633 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms