RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
SPIN1-203ENST00000469017 WASHC2AQ641Q2 1341 aa28.24■■■□□ 2.11
SPIN1-203ENST00000469017 SIRT1Q96EB6 747 aa28.22■■■□□ 2.11
SPIN1-203ENST00000469017 KIF7Q2M1P5 1343 aa28.22■■■□□ 2.11
SPIN1-203ENST00000469017 TMF1P82094 1093 aa28.2■■■□□ 2.11
SPIN1-203ENST00000469017 PROSER2Q86WR7 435 aaPredicted RBP28.2■■■□□ 2.11
SPIN1-203ENST00000469017 TULP4Q9NRJ4 1543 aa28.19■■■□□ 2.1
SPIN1-203ENST00000469017 CCDC7Q96M83 1385 aa28.17■■■□□ 2.1
SPIN1-203ENST00000469017 SBNO2Q9Y2G9 1366 aa28.17■■■□□ 2.1
SPIN1-203ENST00000469017 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
SPIN1-203ENST00000469017 NUTM2FA1L443 756 aa28.15■■■□□ 2.1
SPIN1-203ENST00000469017 C14orf37Q86TY3 774 aa28.14■■■□□ 2.1
SPIN1-203ENST00000469017 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.1
SPIN1-203ENST00000469017 CDK19Q9BWU1 502 aa28.14■■■□□ 2.09
SPIN1-203ENST00000469017 NALCNQ8IZF0 1738 aa28.14■■■□□ 2.09
SPIN1-203ENST00000469017 TMEM94Q12767 1356 aa28.13■■■□□ 2.09
SPIN1-203ENST00000469017 EVC2Q86UK5 1308 aa28.13■■■□□ 2.09
SPIN1-203ENST00000469017 SRPK2P78362 688 aaKnown RBP28.12■■■□□ 2.09
SPIN1-203ENST00000469017 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
SPIN1-203ENST00000469017 WASLO00401 505 aaPredicted RBP28.1■■■□□ 2.09
SPIN1-203ENST00000469017 XIRP1Q702N8 1843 aaKnown RBP28.08■■■□□ 2.09
SPIN1-203ENST00000469017 LRRC7Q96NW7 1537 aa28.08■■■□□ 2.08
SPIN1-203ENST00000469017 ADGRL3Q9HAR2 1447 aa28.05■■■□□ 2.08
SPIN1-203ENST00000469017 ADGRB2O60241 1585 aa28.05■■■□□ 2.08
SPIN1-203ENST00000469017 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
SPIN1-203ENST00000469017 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
SPIN1-203ENST00000469017 SLC24A1O60721 1099 aa28.02■■■□□ 2.08
SPIN1-203ENST00000469017 CDCA8Q53HL2 280 aa28.01■■■□□ 2.07
SPIN1-203ENST00000469017 SLC12A5Q9H2X9 1139 aa28.01■■■□□ 2.07
SPIN1-203ENST00000469017 LTBP4Q8N2S1 1624 aa28.01■■■□□ 2.07
SPIN1-203ENST00000469017 MYOM1P52179 1685 aa28■■■□□ 2.07
SPIN1-203ENST00000469017 RGPD8O14715 1765 aaPredicted RBP28■■■□□ 2.07
SPIN1-203ENST00000469017 NUDT16Q96DE0 195 aaKnown RBP27.99■■■□□ 2.07
SPIN1-203ENST00000469017 C19orf44Q9H6X5 657 aa27.98■■■□□ 2.07
SPIN1-203ENST00000469017 USP32Q8NFA0 1604 aa27.97■■■□□ 2.07
SPIN1-203ENST00000469017 CDC42BPGQ6DT37 1551 aa27.96■■■□□ 2.07
SPIN1-203ENST00000469017 ATP7BP35670 1465 aa27.96■■■□□ 2.07
SPIN1-203ENST00000469017 FMN2Q9NZ56 1722 aa27.96■■■□□ 2.07
SPIN1-203ENST00000469017 CABP1Q9NZU7 370 aa27.95■■■□□ 2.07
SPIN1-203ENST00000469017 PANK3Q9H999 370 aa27.93■■■□□ 2.06
SPIN1-203ENST00000469017 MSH6P52701 1360 aa27.92■■■□□ 2.06
SPIN1-203ENST00000469017 ATAD2Q6PL18 1390 aa27.92■■■□□ 2.06
SPIN1-203ENST00000469017 ATF3P18847 181 aa27.91■■■□□ 2.06
SPIN1-203ENST00000469017 PPIP5K1Q6PFW1 1433 aa27.91■■■□□ 2.06
SPIN1-203ENST00000469017 NCOA3Q9Y6Q9 1424 aa27.91■■■□□ 2.06
SPIN1-203ENST00000469017 CNGB1Q14028 1251 aaPredicted RBP27.9■■■□□ 2.06
SPIN1-203ENST00000469017 PMFBP1Q8TBY8 1022 aa27.9■■■□□ 2.06
SPIN1-203ENST00000469017 CCDC61Q9Y6R9 512 aa27.9■■■□□ 2.06
SPIN1-203ENST00000469017 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
SPIN1-203ENST00000469017 DIEXFQ68CQ4 756 aaKnown RBP27.88■■■□□ 2.05
SPIN1-203ENST00000469017 ORAI2Q96SN7 254 aa27.87■■■□□ 2.05
SPIN1-203ENST00000469017 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
SPIN1-203ENST00000469017 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
SPIN1-203ENST00000469017 CD163L1Q9NR16 1453 aa27.84■■■□□ 2.05
SPIN1-203ENST00000469017 CADPS2Q86UW7 1296 aa27.84■■■□□ 2.05
SPIN1-203ENST00000469017 CARD14Q9BXL6 1004 aa27.84■■■□□ 2.05
SPIN1-203ENST00000469017 MST1RQ04912 1400 aa27.84■■■□□ 2.05
SPIN1-203ENST00000469017 A0A1W2PP64 1363 aa27.83■■■□□ 2.05
SPIN1-203ENST00000469017 DCCP43146 1447 aa27.82■■■□□ 2.04
SPIN1-203ENST00000469017 ANKARQ7Z5J8 1434 aa27.82■■■□□ 2.04
SPIN1-203ENST00000469017 C1orf167Q5SNV9 1468 aa27.82■■■□□ 2.04
SPIN1-203ENST00000469017 ACEP12821 1306 aa27.81■■■□□ 2.04
SPIN1-203ENST00000469017 ITSN1Q15811 1721 aa27.8■■■□□ 2.04
SPIN1-203ENST00000469017 ANKRD36BQ8N2N9 1353 aa27.79■■■□□ 2.04
SPIN1-203ENST00000469017 PER1O15534 1290 aaPredicted RBP27.79■■■□□ 2.04
SPIN1-203ENST00000469017 PHF8Q9UPP1 1060 aa27.78■■■□□ 2.04
SPIN1-203ENST00000469017 PLEKHG3A1L390 1219 aa27.77■■■□□ 2.04
SPIN1-203ENST00000469017 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
SPIN1-203ENST00000469017 NINLQ9Y2I6 1382 aa27.77■■■□□ 2.04
SPIN1-203ENST00000469017 NGDNQ8NEJ9 315 aaKnown RBP27.77■■■□□ 2.04
SPIN1-203ENST00000469017 SLAIN2Q9P270 581 aa27.77■■■□□ 2.04
SPIN1-203ENST00000469017 TERF2IPQ9NYB0 399 aa27.76■■■□□ 2.03
SPIN1-203ENST00000469017 NSD3Q9BZ95 1437 aa27.76■■■□□ 2.03
SPIN1-203ENST00000469017 HDGFL2Q7Z4V5 671 aaPredicted RBP27.75■■■□□ 2.03
SPIN1-203ENST00000469017 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
SPIN1-203ENST00000469017 CPSF1Q10570 1443 aaKnown RBP27.74■■■□□ 2.03
SPIN1-203ENST00000469017 FOXO3O43524 673 aa27.74■■■□□ 2.03
SPIN1-203ENST00000469017 KTN1Q86UP2 1357 aaKnown RBP27.74■■■□□ 2.03
SPIN1-203ENST00000469017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.72■■■□□ 2.031e-6■■■□□ 17
SPIN1-203ENST00000469017 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
SPIN1-203ENST00000469017 KNSTRNQ9Y448 316 aa27.72■■■□□ 2.03
SPIN1-203ENST00000469017 CC2D1BQ5T0F9 858 aaKnown RBP27.71■■■□□ 2.03
SPIN1-203ENST00000469017 BRINP3Q76B58 766 aa27.7■■■□□ 2.02
SPIN1-203ENST00000469017 POLR3AO14802 1390 aaPredicted RBP27.7■■■□□ 2.02
SPIN1-203ENST00000469017 CERKQ8TCT0 537 aa27.69■■■□□ 2.02
SPIN1-203ENST00000469017 MON2Q7Z3U7 1717 aa27.68■■■□□ 2.02
SPIN1-203ENST00000469017 USP6P35125 1406 aa27.66■■■□□ 2.02
SPIN1-203ENST00000469017 AMER1Q5JTC6 1135 aaPredicted RBP27.66■■■□□ 2.02
SPIN1-203ENST00000469017 PSME1Q06323 249 aa27.65■■■□□ 2.02
SPIN1-203ENST00000469017 ZNF692Q9BU19 519 aaPredicted RBP27.65■■■□□ 2.02
SPIN1-203ENST00000469017 PIP4K2BP78356 416 aa27.64■■■□□ 2.02
SPIN1-203ENST00000469017 ZRANB1Q9UGI0 708 aa27.64■■■□□ 2.02
SPIN1-203ENST00000469017 PAK3O75914 559 aaPredicted RBP27.63■■■□□ 2.01
SPIN1-203ENST00000469017 UBAP1LF5GYI3 381 aa27.63■■■□□ 2.01
SPIN1-203ENST00000469017 NME9Q86XW9 330 aa27.63■■■□□ 2.01
SPIN1-203ENST00000469017 GGNBP2Q9H3C7 697 aa27.63■■■□□ 2.01
SPIN1-203ENST00000469017 EDC4Q6P2E9 1401 aaKnown RBP27.62■■■□□ 2.01
SPIN1-203ENST00000469017 MIER1Q8N108 512 aa27.62■■■□□ 2.01
SPIN1-203ENST00000469017 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
SPIN1-203ENST00000469017 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms