RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 POGKQ9P215 609 aa21.23■□□□□ 0.99
TMEM39A-205ENST00000468676 TRAK1Q9UPV9 953 aa21.23■□□□□ 0.99
TMEM39A-205ENST00000468676 MST1RQ04912 1400 aa21.22■□□□□ 0.99
TMEM39A-205ENST00000468676 PLEKHH1Q9ULM0 1364 aa21.22■□□□□ 0.99
TMEM39A-205ENST00000468676 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
TMEM39A-205ENST00000468676 NBPF1Q3BBV0 1214 aa21.18■□□□□ 0.98
TMEM39A-205ENST00000468676 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
TMEM39A-205ENST00000468676 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
TMEM39A-205ENST00000468676 SAFB2Q14151 953 aaKnown RBP eCLIP21.15■□□□□ 0.98
TMEM39A-205ENST00000468676 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
TMEM39A-205ENST00000468676 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
TMEM39A-205ENST00000468676 PHLPP1O60346 1717 aa21.14■□□□□ 0.97
TMEM39A-205ENST00000468676 ARHGEF28Q8N1W1 1705 aaKnown RBP21.14■□□□□ 0.97
TMEM39A-205ENST00000468676 CCER1Q8TC90 406 aaPredicted RBP21.13■□□□□ 0.97
TMEM39A-205ENST00000468676 AHDC1Q5TGY3 1603 aaPredicted RBP21.13■□□□□ 0.97
TMEM39A-205ENST00000468676 ROCK2O75116 1388 aaKnown RBP21.12■□□□□ 0.97
TMEM39A-205ENST00000468676 ADGRB2O60241 1585 aa21.11■□□□□ 0.97
TMEM39A-205ENST00000468676 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
TMEM39A-205ENST00000468676 FMN2Q9NZ56 1722 aa21.11■□□□□ 0.97
TMEM39A-205ENST00000468676 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
TMEM39A-205ENST00000468676 MINK1Q8N4C8 1332 aaPredicted RBP21.09■□□□□ 0.97
TMEM39A-205ENST00000468676 ESCO1Q5FWF5 840 aa21.09■□□□□ 0.97
TMEM39A-205ENST00000468676 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
TMEM39A-205ENST00000468676 GPRASP1Q5JY77 1395 aa21.08■□□□□ 0.96
TMEM39A-205ENST00000468676 NHSL1Q5SYE7 1610 aa21.07■□□□□ 0.96
TMEM39A-205ENST00000468676 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
TMEM39A-205ENST00000468676 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 ANKARQ7Z5J8 1434 aa21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 NUTM2FA1L443 756 aa21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 WASLO00401 505 aaPredicted RBP21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 JCADQ9P266 1359 aa21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 RALGAPBQ86X10 1494 aa21.06■□□□□ 0.96
TMEM39A-205ENST00000468676 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
TMEM39A-205ENST00000468676 LRRC59Q96AG4 307 aaKnown RBP21.04■□□□□ 0.96
TMEM39A-205ENST00000468676 CARD11Q9BXL7 1154 aa21.03■□□□□ 0.96
TMEM39A-205ENST00000468676 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
TMEM39A-205ENST00000468676 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
TMEM39A-205ENST00000468676 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
TMEM39A-205ENST00000468676 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
TMEM39A-205ENST00000468676 RGPD8O14715 1765 aaPredicted RBP21■□□□□ 0.95
TMEM39A-205ENST00000468676 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
TMEM39A-205ENST00000468676 FOXO3O43524 673 aa20.99■□□□□ 0.95
TMEM39A-205ENST00000468676 CDK19Q9BWU1 502 aa20.99■□□□□ 0.95
TMEM39A-205ENST00000468676 QRICH2Q9H0J4 1663 aa20.99■□□□□ 0.95
TMEM39A-205ENST00000468676 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
TMEM39A-205ENST00000468676 SPATA31A6Q5VVP1 1343 aa20.98■□□□□ 0.95
TMEM39A-205ENST00000468676 USP32Q8NFA0 1604 aa20.97■□□□□ 0.95
TMEM39A-205ENST00000468676 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
TMEM39A-205ENST00000468676 NUDT16Q96DE0 195 aaKnown RBP20.96■□□□□ 0.95
TMEM39A-205ENST00000468676 PRR36Q9H6K5 1346 aa20.95■□□□□ 0.94
TMEM39A-205ENST00000468676 DISP3Q9P2K9 1392 aa20.95■□□□□ 0.94
TMEM39A-205ENST00000468676 PXDNQ92626 1479 aa20.94■□□□□ 0.94
TMEM39A-205ENST00000468676 PSME1Q06323 249 aa20.94■□□□□ 0.94
TMEM39A-205ENST00000468676 ITSN1Q15811 1721 aa20.94■□□□□ 0.94
TMEM39A-205ENST00000468676 EVC2Q86UK5 1308 aa20.94■□□□□ 0.94
TMEM39A-205ENST00000468676 SRPK2P78362 688 aaKnown RBP20.93■□□□□ 0.94
TMEM39A-205ENST00000468676 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
TMEM39A-205ENST00000468676 CCDC61Q9Y6R9 512 aa20.93■□□□□ 0.94
TMEM39A-205ENST00000468676 SBNO2Q9Y2G9 1366 aa20.93■□□□□ 0.94
TMEM39A-205ENST00000468676 ATP7BP35670 1465 aa20.92■□□□□ 0.94
TMEM39A-205ENST00000468676 SLC24A1O60721 1099 aa20.91■□□□□ 0.94
TMEM39A-205ENST00000468676 PNPLA6Q8IY17 1366 aa20.91■□□□□ 0.94
TMEM39A-205ENST00000468676 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
TMEM39A-205ENST00000468676 XPCQ01831 940 aaPredicted RBP20.9■□□□□ 0.94
TMEM39A-205ENST00000468676 NGDNQ8NEJ9 315 aaKnown RBP20.9■□□□□ 0.94
TMEM39A-205ENST00000468676 SBNO1A3KN83 1393 aa20.88■□□□□ 0.93
TMEM39A-205ENST00000468676 PLEKHG3A1L390 1219 aa20.88■□□□□ 0.93
TMEM39A-205ENST00000468676 SPATA31A3Q5VYP0 1347 aa20.87■□□□□ 0.93
TMEM39A-205ENST00000468676 CABP2Q9NPB3 220 aa20.87■□□□□ 0.93
TMEM39A-205ENST00000468676 TOPAZ1Q8N9V7 1692 aa20.86■□□□□ 0.93
TMEM39A-205ENST00000468676 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
TMEM39A-205ENST00000468676 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
TMEM39A-205ENST00000468676 POLR3AO14802 1390 aaPredicted RBP20.85■□□□□ 0.93
TMEM39A-205ENST00000468676 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
TMEM39A-205ENST00000468676 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
TMEM39A-205ENST00000468676 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
TMEM39A-205ENST00000468676 TNS3Q68CZ2 1445 aa20.84■□□□□ 0.93
TMEM39A-205ENST00000468676 ST20-MTHFSA0A0A6YYL1 179 aa20.83■□□□□ 0.93
TMEM39A-205ENST00000468676 PPIP5K1Q6PFW1 1433 aa20.83■□□□□ 0.93
TMEM39A-205ENST00000468676 ARHGEF10O15013 1369 aa20.83■□□□□ 0.92
TMEM39A-205ENST00000468676 ATAD2Q6PL18 1390 aa20.83■□□□□ 0.92
TMEM39A-205ENST00000468676 USP47Q96K76 1375 aa20.83■□□□□ 0.92
TMEM39A-205ENST00000468676 LRP6O75581 1613 aa20.82■□□□□ 0.92
TMEM39A-205ENST00000468676 ACEP12821 1306 aa20.82■□□□□ 0.92
TMEM39A-205ENST00000468676 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
TMEM39A-205ENST00000468676 TESK2Q96S53 571 aa20.8■□□□□ 0.92
TMEM39A-205ENST00000468676 CABP1Q9NZU7 370 aa20.8■□□□□ 0.92
TMEM39A-205ENST00000468676 TRPM3Q9HCF6 1732 aaPredicted RBP20.79■□□□□ 0.92
TMEM39A-205ENST00000468676 LMOD2Q6P5Q4 547 aa20.79■□□□□ 0.92
TMEM39A-205ENST00000468676 BRD4O60885 1362 aaPredicted RBP20.79■□□□□ 0.92
TMEM39A-205ENST00000468676 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
TMEM39A-205ENST00000468676 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
TMEM39A-205ENST00000468676 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
TMEM39A-205ENST00000468676 TMF1P82094 1093 aa20.75■□□□□ 0.91
TMEM39A-205ENST00000468676 ADAMTS2O95450 1211 aa20.74■□□□□ 0.91
TMEM39A-205ENST00000468676 ZNF772Q68DY9 489 aaPredicted RBP20.74■□□□□ 0.91
TMEM39A-205ENST00000468676 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
TMEM39A-205ENST00000468676 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
TMEM39A-205ENST00000468676 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms