RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
NXF3-204ENST00000468528 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
NXF3-204ENST00000468528 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
NXF3-204ENST00000468528 WAPLQ7Z5K2 1190 aa9.96□□□□□ -0.82
NXF3-204ENST00000468528 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
NXF3-204ENST00000468528 C19orf44Q9H6X5 657 aa9.95□□□□□ -0.82
NXF3-204ENST00000468528 NINLQ9Y2I6 1382 aa9.95□□□□□ -0.82
NXF3-204ENST00000468528 DCCP43146 1447 aa9.95□□□□□ -0.82
NXF3-204ENST00000468528 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
NXF3-204ENST00000468528 ADGRB2O60241 1585 aa9.95□□□□□ -0.82
NXF3-204ENST00000468528 QRICH2Q9H0J4 1663 aa9.94□□□□□ -0.82
NXF3-204ENST00000468528 TMEM94Q12767 1356 aa9.94□□□□□ -0.82
NXF3-204ENST00000468528 ATAD2Q6PL18 1390 aa9.94□□□□□ -0.82
NXF3-204ENST00000468528 PLEKHH1Q9ULM0 1364 aa9.94□□□□□ -0.82
NXF3-204ENST00000468528 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
NXF3-204ENST00000468528 ZNF335Q9H4Z2 1342 aaPredicted RBP9.94□□□□□ -0.82
NXF3-204ENST00000468528 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
NXF3-204ENST00000468528 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
NXF3-204ENST00000468528 MSH6P52701 1360 aa9.93□□□□□ -0.82
NXF3-204ENST00000468528 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
NXF3-204ENST00000468528 CDC42BPGQ6DT37 1551 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 ANKARQ7Z5J8 1434 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 CCDC7Q96M83 1385 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 ATF3P18847 181 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 SRPK2P78362 688 aaKnown RBP9.92□□□□□ -0.82
NXF3-204ENST00000468528 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
NXF3-204ENST00000468528 HIRIP3Q9BW71 556 aaPredicted RBP9.92□□□□□ -0.82
NXF3-204ENST00000468528 CDK19Q9BWU1 502 aa9.92□□□□□ -0.82
NXF3-204ENST00000468528 DISP3Q9P2K9 1392 aa9.91□□□□□ -0.82
NXF3-204ENST00000468528 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
NXF3-204ENST00000468528 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
NXF3-204ENST00000468528 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
NXF3-204ENST00000468528 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
NXF3-204ENST00000468528 LTBP4Q8N2S1 1624 aa9.9□□□□□ -0.82
NXF3-204ENST00000468528 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.82
NXF3-204ENST00000468528 IQSEC2Q5JU85 1478 aa9.9□□□□□ -0.83
NXF3-204ENST00000468528 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.9□□□□□ -0.83
NXF3-204ENST00000468528 NUDT16Q96DE0 195 aaKnown RBP9.89□□□□□ -0.83
NXF3-204ENST00000468528 TERF2IPQ9NYB0 399 aa9.89□□□□□ -0.83
NXF3-204ENST00000468528 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
NXF3-204ENST00000468528 C11orf95C9JLR9 678 aaPredicted RBP9.88□□□□□ -0.83
NXF3-204ENST00000468528 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
NXF3-204ENST00000468528 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
NXF3-204ENST00000468528 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
NXF3-204ENST00000468528 ZBTB22O15209 634 aa9.87□□□□□ -0.83
NXF3-204ENST00000468528 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
NXF3-204ENST00000468528 NALCNQ8IZF0 1738 aa9.87□□□□□ -0.83
NXF3-204ENST00000468528 ATP7BP35670 1465 aa9.86□□□□□ -0.83
NXF3-204ENST00000468528 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
NXF3-204ENST00000468528 POLR3GLQ9BT43 218 aa9.86□□□□□ -0.83
NXF3-204ENST00000468528 BRD4O60885 1362 aaPredicted RBP9.86□□□□□ -0.83
NXF3-204ENST00000468528 ANKRD36BQ8N2N9 1353 aa9.86□□□□□ -0.83
NXF3-204ENST00000468528 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
NXF3-204ENST00000468528 TMC1Q8TDI8 760 aa9.85□□□□□ -0.83
NXF3-204ENST00000468528 RBM33Q96EV2 1170 aaKnown RBP9.85□□□□□ -0.83
NXF3-204ENST00000468528 MST1RQ04912 1400 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 TOM1O60784 492 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 CABP1Q9NZU7 370 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
NXF3-204ENST00000468528 ITSN1Q15811 1721 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 C1orf167Q5SNV9 1468 aa9.84□□□□□ -0.83
NXF3-204ENST00000468528 PRR36Q9H6K5 1346 aa9.83□□□□□ -0.84
NXF3-204ENST00000468528 DDX10Q13206 875 aaKnown RBP9.83□□□□□ -0.84
NXF3-204ENST00000468528 ESCO1Q5FWF5 840 aa9.83□□□□□ -0.84
NXF3-204ENST00000468528 SLC12A5Q9H2X9 1139 aa9.83□□□□□ -0.84
NXF3-204ENST00000468528 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
NXF3-204ENST00000468528 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
NXF3-204ENST00000468528 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
NXF3-204ENST00000468528 CERKQ8TCT0 537 aa9.82□□□□□ -0.84
NXF3-204ENST00000468528 PANK3Q9H999 370 aa9.82□□□□□ -0.84
NXF3-204ENST00000468528 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
NXF3-204ENST00000468528 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
NXF3-204ENST00000468528 TOPAZ1Q8N9V7 1692 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 NPC1L1Q9UHC9 1359 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 NUTM2FA1L443 756 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 USP32Q8NFA0 1604 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
NXF3-204ENST00000468528 ACEP12821 1306 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 CGNL1Q0VF96 1302 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 NPHP3Q7Z494 1330 aa9.81□□□□□ -0.84
NXF3-204ENST00000468528 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 NSD2O96028 1365 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 KTN1Q86UP2 1357 aaKnown RBP9.8□□□□□ -0.84
NXF3-204ENST00000468528 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
NXF3-204ENST00000468528 PSME1Q06323 249 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 MYOM1P52179 1685 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 TTC21AQ8NDW8 1320 aa9.8□□□□□ -0.84
NXF3-204ENST00000468528 USP6P35125 1406 aa9.79□□□□□ -0.84
NXF3-204ENST00000468528 CD163L1Q9NR16 1453 aa9.79□□□□□ -0.84
NXF3-204ENST00000468528 DIEXFQ68CQ4 756 aaKnown RBP9.78□□□□□ -0.84
NXF3-204ENST00000468528 BRINP3Q76B58 766 aa9.78□□□□□ -0.84
NXF3-204ENST00000468528 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
NXF3-204ENST00000468528 ORAI2Q96SN7 254 aa9.78□□□□□ -0.84
NXF3-204ENST00000468528 UBAP1LF5GYI3 381 aa9.77□□□□□ -0.85
NXF3-204ENST00000468528 FOXO3O43524 673 aa9.77□□□□□ -0.85
NXF3-204ENST00000468528 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms