RNA–Protein interactions for RNA: ENST00000468197.3

RN7SL554P-201, Transcript of RNA, 7SL, cytoplasmic 554, pseudogene, humanhuman

BASIC

Gene RN7SL554P, Length 292 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL554P-201ENST00000468197 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
RN7SL554P-201ENST00000468197 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
RN7SL554P-201ENST00000468197 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
RN7SL554P-201ENST00000468197 POGKQ9P215 609 aa12.79□□□□□ -0.36
RN7SL554P-201ENST00000468197 PLEKHH1Q9ULM0 1364 aa12.79□□□□□ -0.36
RN7SL554P-201ENST00000468197 PPLO60437 1756 aa12.79□□□□□ -0.36
RN7SL554P-201ENST00000468197 TECPR2O15040 1411 aa12.79□□□□□ -0.36
RN7SL554P-201ENST00000468197 FOXO3O43524 673 aa12.78□□□□□ -0.36
RN7SL554P-201ENST00000468197 SAFB2Q14151 953 aaKnown RBP eCLIP12.78□□□□□ -0.36
RN7SL554P-201ENST00000468197 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
RN7SL554P-201ENST00000468197 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
RN7SL554P-201ENST00000468197 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
RN7SL554P-201ENST00000468197 C8orf37Q96NL8 207 aa12.77□□□□□ -0.37
RN7SL554P-201ENST00000468197 SOS2Q07890 1332 aaPredicted RBP12.77□□□□□ -0.37
RN7SL554P-201ENST00000468197 MYOM2P54296 1465 aa12.77□□□□□ -0.37
RN7SL554P-201ENST00000468197 LRP6O75581 1613 aa12.77□□□□□ -0.37
RN7SL554P-201ENST00000468197 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
RN7SL554P-201ENST00000468197 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
RN7SL554P-201ENST00000468197 PNPLA6Q8IY17 1366 aa12.76□□□□□ -0.37
RN7SL554P-201ENST00000468197 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
RN7SL554P-201ENST00000468197 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
RN7SL554P-201ENST00000468197 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
RN7SL554P-201ENST00000468197 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
RN7SL554P-201ENST00000468197 NALCNQ8IZF0 1738 aa12.74□□□□□ -0.37
RN7SL554P-201ENST00000468197 AFF2P51816 1311 aa12.74□□□□□ -0.37
RN7SL554P-201ENST00000468197 RXRBP28702 533 aa12.74□□□□□ -0.37
RN7SL554P-201ENST00000468197 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
RN7SL554P-201ENST00000468197 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
RN7SL554P-201ENST00000468197 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.37
RN7SL554P-201ENST00000468197 CDC42BPGQ6DT37 1551 aa12.71□□□□□ -0.37
RN7SL554P-201ENST00000468197 PSME1Q06323 249 aa12.7□□□□□ -0.38
RN7SL554P-201ENST00000468197 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
RN7SL554P-201ENST00000468197 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
RN7SL554P-201ENST00000468197 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
RN7SL554P-201ENST00000468197 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
RN7SL554P-201ENST00000468197 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
RN7SL554P-201ENST00000468197 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
RN7SL554P-201ENST00000468197 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
RN7SL554P-201ENST00000468197 USP21Q9UK80 565 aa12.68□□□□□ -0.38
RN7SL554P-201ENST00000468197 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
RN7SL554P-201ENST00000468197 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
RN7SL554P-201ENST00000468197 SPATA31A3Q5VYP0 1347 aa12.66□□□□□ -0.38
RN7SL554P-201ENST00000468197 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
RN7SL554P-201ENST00000468197 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
RN7SL554P-201ENST00000468197 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
RN7SL554P-201ENST00000468197 PXDNQ92626 1479 aa12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 LAMC1P11047 1609 aa12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
RN7SL554P-201ENST00000468197 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
RN7SL554P-201ENST00000468197 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
RN7SL554P-201ENST00000468197 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
RN7SL554P-201ENST00000468197 NBPF1Q3BBV0 1214 aa12.63□□□□□ -0.39
RN7SL554P-201ENST00000468197 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
RN7SL554P-201ENST00000468197 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
RN7SL554P-201ENST00000468197 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
RN7SL554P-201ENST00000468197 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
RN7SL554P-201ENST00000468197 SIN3AQ96ST3 1273 aa12.62□□□□□ -0.39
RN7SL554P-201ENST00000468197 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
RN7SL554P-201ENST00000468197 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
RN7SL554P-201ENST00000468197 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
RN7SL554P-201ENST00000468197 ARHGEF10O15013 1369 aa12.6□□□□□ -0.39
RN7SL554P-201ENST00000468197 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
RN7SL554P-201ENST00000468197 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
RN7SL554P-201ENST00000468197 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
RN7SL554P-201ENST00000468197 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
RN7SL554P-201ENST00000468197 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
RN7SL554P-201ENST00000468197 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
RN7SL554P-201ENST00000468197 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
RN7SL554P-201ENST00000468197 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
RN7SL554P-201ENST00000468197 GJD4Q96KN9 370 aaPredicted RBP12.57□□□□□ -0.4
RN7SL554P-201ENST00000468197 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
RN7SL554P-201ENST00000468197 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
RN7SL554P-201ENST00000468197 CENPJQ9HC77 1338 aaPredicted RBP12.57□□□□□ -0.4
RN7SL554P-201ENST00000468197 RGS12O14924 1447 aa12.56□□□□□ -0.4
RN7SL554P-201ENST00000468197 ATRNO75882 1429 aa12.56□□□□□ -0.4
RN7SL554P-201ENST00000468197 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
RN7SL554P-201ENST00000468197 BCL9LQ86UU0 1499 aa12.56□□□□□ -0.4
RN7SL554P-201ENST00000468197 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
RN7SL554P-201ENST00000468197 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
RN7SL554P-201ENST00000468197 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
RN7SL554P-201ENST00000468197 ADGRB2O60241 1585 aa12.55□□□□□ -0.4
RN7SL554P-201ENST00000468197 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
RN7SL554P-201ENST00000468197 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
RN7SL554P-201ENST00000468197 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
RN7SL554P-201ENST00000468197 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
RN7SL554P-201ENST00000468197 ACEP12821 1306 aa12.53□□□□□ -0.4
RN7SL554P-201ENST00000468197 ROCK2O75116 1388 aaKnown RBP12.53□□□□□ -0.4
RN7SL554P-201ENST00000468197 VPS72Q15906 364 aa12.52□□□□□ -0.41
RN7SL554P-201ENST00000468197 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
RN7SL554P-201ENST00000468197 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
RN7SL554P-201ENST00000468197 PRDM11Q9NQV5 511 aa12.51□□□□□ -0.41
RN7SL554P-201ENST00000468197 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
RN7SL554P-201ENST00000468197 ATP7BP35670 1465 aa12.51□□□□□ -0.41
RN7SL554P-201ENST00000468197 SLIT2O94813 1529 aa12.51□□□□□ -0.41
RN7SL554P-201ENST00000468197 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
RN7SL554P-201ENST00000468197 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
RN7SL554P-201ENST00000468197 EVC2Q86UK5 1308 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms