RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
CCDC66-211ENST00000468108 KIFC2Q96AC6 838 aa10.6□□□□□ -0.71
CCDC66-211ENST00000468108 MRGPRX2Q96LB1 330 aa10.6□□□□□ -0.71
CCDC66-211ENST00000468108 KRTAP4-6Q9BYQ5 205 aa10.6□□□□□ -0.71
CCDC66-211ENST00000468108 TRIM32Q13049 653 aa10.59□□□□□ -0.71
CCDC66-211ENST00000468108 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
CCDC66-211ENST00000468108 HPS1Q92902 700 aa10.58□□□□□ -0.72
CCDC66-211ENST00000468108 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
CCDC66-211ENST00000468108 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CCDC66-211ENST00000468108 RNF19BQ6ZMZ0 732 aa10.56□□□□□ -0.72
CCDC66-211ENST00000468108 SLC16A10Q8TF71 515 aa10.56□□□□□ -0.72
CCDC66-211ENST00000468108 FECHP22830 423 aa10.55□□□□□ -0.72
CCDC66-211ENST00000468108 GCGRP47871 477 aa10.55□□□□□ -0.72
CCDC66-211ENST00000468108 HIC1Q14526 733 aa10.54□□□□□ -0.72
CCDC66-211ENST00000468108 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
CCDC66-211ENST00000468108 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
CCDC66-211ENST00000468108 GMPRP36959 345 aa10.52□□□□□ -0.73
CCDC66-211ENST00000468108 ZSCAN1Q8NBB4 408 aa10.52□□□□□ -0.73
CCDC66-211ENST00000468108 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
CCDC66-211ENST00000468108 MMP16P51512 607 aa10.5□□□□□ -0.73
CCDC66-211ENST00000468108 NLRP7Q8WX94 980 aa10.5□□□□□ -0.73
CCDC66-211ENST00000468108 SULF1Q8IWU6 871 aa10.49□□□□□ -0.73
CCDC66-211ENST00000468108 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
CCDC66-211ENST00000468108 IRF7Q92985 503 aa10.48□□□□□ -0.73
CCDC66-211ENST00000468108 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
CCDC66-211ENST00000468108 RC3H1Q5TC82 1133 aaKnown RBP10.47□□□□□ -0.73
CCDC66-211ENST00000468108 SEMA3EO15041 775 aa10.46□□□□□ -0.73
CCDC66-211ENST00000468108 Q3C1V9 767 aa10.46□□□□□ -0.73
CCDC66-211ENST00000468108 SKOR1P84550 965 aa10.45□□□□□ -0.74
CCDC66-211ENST00000468108 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
CCDC66-211ENST00000468108 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
CCDC66-211ENST00000468108 GNPATO15228 680 aa10.44□□□□□ -0.74
CCDC66-211ENST00000468108 DXOO77932 396 aaKnown RBP10.44□□□□□ -0.74
CCDC66-211ENST00000468108 ALDH1A1P00352 501 aa10.43□□□□□ -0.74
CCDC66-211ENST00000468108 VEGFBP49765 207 aa10.43□□□□□ -0.74
CCDC66-211ENST00000468108 WNT7BP56706 349 aa10.43□□□□□ -0.74
CCDC66-211ENST00000468108 BMP1P13497 986 aa10.42□□□□□ -0.74
CCDC66-211ENST00000468108 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
CCDC66-211ENST00000468108 H3BM21 787 aa10.41□□□□□ -0.74
CCDC66-211ENST00000468108 TRIM46Q7Z4K8 759 aa10.41□□□□□ -0.74
CCDC66-211ENST00000468108 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
CCDC66-211ENST00000468108 RBM26Q5T8P6 1007 aaKnown RBP10.4□□□□□ -0.74
CCDC66-211ENST00000468108 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
CCDC66-211ENST00000468108 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
CCDC66-211ENST00000468108 GPR37O15354 613 aa10.38□□□□□ -0.75
CCDC66-211ENST00000468108 CAPN5O15484 640 aaPredicted RBP10.37□□□□□ -0.75
CCDC66-211ENST00000468108 HAP1P54257 671 aaPredicted RBP10.37□□□□□ -0.75
CCDC66-211ENST00000468108 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
CCDC66-211ENST00000468108 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
CCDC66-211ENST00000468108 SIAH2O43255 324 aa10.33□□□□□ -0.76
CCDC66-211ENST00000468108 WASF2Q9Y6W5 498 aa10.33□□□□□ -0.76
CCDC66-211ENST00000468108 CD46P15529 392 aa10.32□□□□□ -0.76
CCDC66-211ENST00000468108 EHBP1Q8NDI1 1231 aa10.32□□□□□ -0.76
CCDC66-211ENST00000468108 KDM4AO75164 1064 aa10.31□□□□□ -0.76
CCDC66-211ENST00000468108 HLA-CQ95604 372 aa10.31□□□□□ -0.76
CCDC66-211ENST00000468108 TESPA1A2RU30 521 aaPredicted RBP10.3□□□□□ -0.76
CCDC66-211ENST00000468108 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
CCDC66-211ENST00000468108 JUNDP17535 347 aa10.28□□□□□ -0.76
CCDC66-211ENST00000468108 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
CCDC66-211ENST00000468108 USP46P62068 366 aa10.26□□□□□ -0.77
CCDC66-211ENST00000468108 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
CCDC66-211ENST00000468108 HOXA2O43364 376 aa10.24□□□□□ -0.77
CCDC66-211ENST00000468108 VSIG8P0DPA2 414 aa10.24□□□□□ -0.77
CCDC66-211ENST00000468108 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
CCDC66-211ENST00000468108 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
CCDC66-211ENST00000468108 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
CCDC66-211ENST00000468108 SH3BP2P78314 561 aa10.22□□□□□ -0.77
CCDC66-211ENST00000468108 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
CCDC66-211ENST00000468108 MRPL14Q6P1L8 145 aaKnown RBP10.21□□□□□ -0.77
CCDC66-211ENST00000468108 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
CCDC66-211ENST00000468108 TLL2Q9Y6L7 1015 aa10.21□□□□□ -0.77
CCDC66-211ENST00000468108 GSK3AP49840 483 aa10.2□□□□□ -0.78
CCDC66-211ENST00000468108 SOBPA7XYQ1 873 aa10.19□□□□□ -0.78
CCDC66-211ENST00000468108 SCARF1Q14162 830 aa10.19□□□□□ -0.78
CCDC66-211ENST00000468108 RETREG3Q86VR2 466 aa10.18□□□□□ -0.78
CCDC66-211ENST00000468108 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
CCDC66-211ENST00000468108 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
CCDC66-211ENST00000468108 NNTQ13423 1086 aa10.17□□□□□ -0.78
CCDC66-211ENST00000468108 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
CCDC66-211ENST00000468108 CCNYL3P0C7X3 344 aa10.15□□□□□ -0.78
CCDC66-211ENST00000468108 TIMP2P16035 220 aa10.15□□□□□ -0.78
CCDC66-211ENST00000468108 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
CCDC66-211ENST00000468108 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
CCDC66-211ENST00000468108 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
CCDC66-211ENST00000468108 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
CCDC66-211ENST00000468108 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
CCDC66-211ENST00000468108 CCDC180Q9P1Z9 1646 aa10.14□□□□□ -0.79
CCDC66-211ENST00000468108 MS4A1P11836 297 aa10.13□□□□□ -0.79
CCDC66-211ENST00000468108 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
CCDC66-211ENST00000468108 ADH1CP00326 375 aa10.12□□□□□ -0.79
CCDC66-211ENST00000468108 WDR4P57081 412 aaKnown RBP10.12□□□□□ -0.79
CCDC66-211ENST00000468108 MPNDQ8N594 471 aa10.12□□□□□ -0.79
CCDC66-211ENST00000468108 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
CCDC66-211ENST00000468108 BAP1Q92560 729 aa10.11□□□□□ -0.79
CCDC66-211ENST00000468108 GDF11O95390 407 aa10.1□□□□□ -0.79
CCDC66-211ENST00000468108 RASSF7Q02833 373 aa10.1□□□□□ -0.79
CCDC66-211ENST00000468108 MAP2K5Q13163 448 aa10.1□□□□□ -0.79
CCDC66-211ENST00000468108 MAN1A2O60476 641 aa10.09□□□□□ -0.79
CCDC66-211ENST00000468108 PTPRNQ16849 979 aa10.09□□□□□ -0.79
CCDC66-211ENST00000468108 ZNF511Q8NB15 262 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms