RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 PXDNQ92626 1479 aa20.74■□□□□ 0.91
RPP40-204ENST00000468105 KIF1BO60333 1816 aa20.74■□□□□ 0.91
RPP40-204ENST00000468105 NAIPQ13075 1403 aa20.69■□□□□ 0.9
RPP40-204ENST00000468105 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
RPP40-204ENST00000468105 PPLO60437 1756 aa20.67■□□□□ 0.9
RPP40-204ENST00000468105 FOXO3O43524 673 aa20.67■□□□□ 0.9
RPP40-204ENST00000468105 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
RPP40-204ENST00000468105 GLI3P10071 1580 aa20.67■□□□□ 0.9
RPP40-204ENST00000468105 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
RPP40-204ENST00000468105 CDC42BPGQ6DT37 1551 aa20.65■□□□□ 0.9
RPP40-204ENST00000468105 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
RPP40-204ENST00000468105 VGFO15240 615 aaPredicted RBP20.65■□□□□ 0.9
RPP40-204ENST00000468105 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
RPP40-204ENST00000468105 GJD4Q96KN9 370 aaPredicted RBP20.65■□□□□ 0.9
RPP40-204ENST00000468105 ZRANB1Q9UGI0 708 aa20.65■□□□□ 0.9
RPP40-204ENST00000468105 PLEKHH1Q9ULM0 1364 aa20.64■□□□□ 0.89
RPP40-204ENST00000468105 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
RPP40-204ENST00000468105 BRWD3Q6RI45 1802 aa20.62■□□□□ 0.89
RPP40-204ENST00000468105 FOXD1Q16676 465 aa20.62■□□□□ 0.89
RPP40-204ENST00000468105 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
RPP40-204ENST00000468105 NPHP3Q7Z494 1330 aa20.61■□□□□ 0.89
RPP40-204ENST00000468105 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
RPP40-204ENST00000468105 SLIT2O94813 1529 aa20.61■□□□□ 0.89
RPP40-204ENST00000468105 RPGRIP1LQ68CZ1 1315 aa20.59■□□□□ 0.89
RPP40-204ENST00000468105 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.59■□□□□ 0.89
RPP40-204ENST00000468105 STK26Q9P289 416 aa20.58■□□□□ 0.89
RPP40-204ENST00000468105 TMEM132EQ6IEE7 984 aa20.57■□□□□ 0.88
RPP40-204ENST00000468105 SPATA31A3Q5VYP0 1347 aa20.56■□□□□ 0.88
RPP40-204ENST00000468105 TECPR2O15040 1411 aa20.56■□□□□ 0.88
RPP40-204ENST00000468105 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
RPP40-204ENST00000468105 CCDC125Q86Z20 511 aa20.56■□□□□ 0.88
RPP40-204ENST00000468105 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
RPP40-204ENST00000468105 FMN2Q9NZ56 1722 aa20.54■□□□□ 0.88
RPP40-204ENST00000468105 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
RPP40-204ENST00000468105 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
RPP40-204ENST00000468105 RGPD8O14715 1765 aaPredicted RBP20.53■□□□□ 0.88
RPP40-204ENST00000468105 USP32Q8NFA0 1604 aa20.53■□□□□ 0.88
RPP40-204ENST00000468105 LRPPRCP42704 1394 aaKnown RBP20.52■□□□□ 0.88
RPP40-204ENST00000468105 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.88
RPP40-204ENST00000468105 SPATA31E1Q6ZUB1 1445 aa20.52■□□□□ 0.87
RPP40-204ENST00000468105 IFT172Q9UG01 1749 aa20.51■□□□□ 0.87
RPP40-204ENST00000468105 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
RPP40-204ENST00000468105 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
RPP40-204ENST00000468105 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
RPP40-204ENST00000468105 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
RPP40-204ENST00000468105 KRT28Q7Z3Y7 464 aa20.5■□□□□ 0.87
RPP40-204ENST00000468105 KNDC1Q76NI1 1749 aa20.49■□□□□ 0.87
RPP40-204ENST00000468105 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
RPP40-204ENST00000468105 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
RPP40-204ENST00000468105 ABCA3Q99758 1704 aa20.47■□□□□ 0.87
RPP40-204ENST00000468105 PIK3C2GO75747 1445 aa20.45■□□□□ 0.86
RPP40-204ENST00000468105 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
RPP40-204ENST00000468105 VPS72Q15906 364 aa20.45■□□□□ 0.86
RPP40-204ENST00000468105 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
RPP40-204ENST00000468105 PSDA5PKW4 1024 aaPredicted RBP20.44■□□□□ 0.86
RPP40-204ENST00000468105 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
RPP40-204ENST00000468105 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
RPP40-204ENST00000468105 FAM83GA6ND36 823 aa20.43■□□□□ 0.86
RPP40-204ENST00000468105 LRP5O75197 1615 aa20.42■□□□□ 0.86
RPP40-204ENST00000468105 PHF8Q9UPP1 1060 aa20.42■□□□□ 0.86
RPP40-204ENST00000468105 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
RPP40-204ENST00000468105 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
RPP40-204ENST00000468105 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
RPP40-204ENST00000468105 NRAPQ86VF7 1730 aa20.39■□□□□ 0.86
RPP40-204ENST00000468105 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
RPP40-204ENST00000468105 ANKRD30BQ9BXX2 1392 aa20.38■□□□□ 0.85
RPP40-204ENST00000468105 HRCP23327 699 aa20.37■□□□□ 0.85
RPP40-204ENST00000468105 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.85
RPP40-204ENST00000468105 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
RPP40-204ENST00000468105 C14orf93Q9H972 538 aaKnown RBP20.37■□□□□ 0.85
RPP40-204ENST00000468105 SBNO1A3KN83 1393 aa20.36■□□□□ 0.85
RPP40-204ENST00000468105 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
RPP40-204ENST00000468105 SIRT1Q96EB6 747 aa20.36■□□□□ 0.85
RPP40-204ENST00000468105 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
RPP40-204ENST00000468105 FAM98CQ17RN3 349 aaKnown RBP20.35■□□□□ 0.85
RPP40-204ENST00000468105 MPHOSPH9Q99550 1183 aa20.35■□□□□ 0.85
RPP40-204ENST00000468105 TRPM3Q9HCF6 1732 aaPredicted RBP20.35■□□□□ 0.85
RPP40-204ENST00000468105 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
RPP40-204ENST00000468105 EN1Q05925 392 aaPredicted RBP20.33■□□□□ 0.85
RPP40-204ENST00000468105 PRAM1Q96QH2 718 aa20.33■□□□□ 0.85
RPP40-204ENST00000468105 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
RPP40-204ENST00000468105 SF3B2Q13435 895 aaKnown RBP20.32■□□□□ 0.84
RPP40-204ENST00000468105 PRR36Q9H6K5 1346 aa20.31■□□□□ 0.84
RPP40-204ENST00000468105 PSME1Q06323 249 aa20.31■□□□□ 0.84
RPP40-204ENST00000468105 BTG4Q9NY30 223 aa20.31■□□□□ 0.84
RPP40-204ENST00000468105 ALS2Q96Q42 1657 aa20.3■□□□□ 0.84
RPP40-204ENST00000468105 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
RPP40-204ENST00000468105 TNS1Q9HBL0 1735 aaKnown RBP20.28■□□□□ 0.84
RPP40-204ENST00000468105 ARHGEF10O15013 1369 aa20.28■□□□□ 0.84
RPP40-204ENST00000468105 THSD7AQ9UPZ6 1657 aa20.27■□□□□ 0.84
RPP40-204ENST00000468105 R3HDM1Q15032 1099 aaKnown RBP20.27■□□□□ 0.84
RPP40-204ENST00000468105 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
RPP40-204ENST00000468105 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.83
RPP40-204ENST00000468105 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.83
RPP40-204ENST00000468105 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
RPP40-204ENST00000468105 A0A0G2JS52 829 aa20.26■□□□□ 0.83
RPP40-204ENST00000468105 BAG6P46379 1132 aa20.26■□□□□ 0.83
RPP40-204ENST00000468105 MYT1Q01538 1121 aa20.26■□□□□ 0.83
RPP40-204ENST00000468105 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
RPP40-204ENST00000468105 EZH2Q15910 746 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 1522.8 ms