RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
PTMA-211ENST00000468027 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
PTMA-211ENST00000468027 SHPRHQ149N8 1683 aa18.93■□□□□ 0.62
PTMA-211ENST00000468027 C1orf167Q5SNV9 1468 aa18.93■□□□□ 0.62
PTMA-211ENST00000468027 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
PTMA-211ENST00000468027 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
PTMA-211ENST00000468027 TRPM1Q7Z4N2 1603 aa18.92■□□□□ 0.62
PTMA-211ENST00000468027 BRINP3Q76B58 766 aa18.92■□□□□ 0.62
PTMA-211ENST00000468027 STK26Q9P289 416 aa18.92■□□□□ 0.62
PTMA-211ENST00000468027 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
PTMA-211ENST00000468027 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
PTMA-211ENST00000468027 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
PTMA-211ENST00000468027 PRAM1Q96QH2 718 aa18.83■□□□□ 0.6
PTMA-211ENST00000468027 NBPF1Q3BBV0 1214 aa18.82■□□□□ 0.6
PTMA-211ENST00000468027 ORAI2Q96SN7 254 aa18.82■□□□□ 0.6
PTMA-211ENST00000468027 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
PTMA-211ENST00000468027 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
PTMA-211ENST00000468027 JCADQ9P266 1359 aa18.81■□□□□ 0.6
PTMA-211ENST00000468027 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
PTMA-211ENST00000468027 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
PTMA-211ENST00000468027 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
PTMA-211ENST00000468027 PXDNQ92626 1479 aa18.79■□□□□ 0.6
PTMA-211ENST00000468027 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
PTMA-211ENST00000468027 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
PTMA-211ENST00000468027 TOPAZ1Q8N9V7 1692 aa18.78■□□□□ 0.6
PTMA-211ENST00000468027 LRP6O75581 1613 aa18.78■□□□□ 0.6
PTMA-211ENST00000468027 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.6
PTMA-211ENST00000468027 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTMA-211ENST00000468027 NBPF8Q3BBV2 869 aa18.76■□□□□ 0.59
PTMA-211ENST00000468027 TULP4Q9NRJ4 1543 aa18.75■□□□□ 0.59
PTMA-211ENST00000468027 TRPM3Q9HCF6 1732 aaPredicted RBP18.75■□□□□ 0.59
PTMA-211ENST00000468027 MARF1Q9Y4F3 1742 aaKnown RBP18.75■□□□□ 0.59
PTMA-211ENST00000468027 ANKARQ7Z5J8 1434 aa18.74■□□□□ 0.59
PTMA-211ENST00000468027 POGKQ9P215 609 aa18.74■□□□□ 0.59
PTMA-211ENST00000468027 GPRASP1Q5JY77 1395 aa18.73■□□□□ 0.59
PTMA-211ENST00000468027 ILDR2Q71H61 639 aa18.73■□□□□ 0.59
PTMA-211ENST00000468027 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
PTMA-211ENST00000468027 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
PTMA-211ENST00000468027 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
PTMA-211ENST00000468027 ESCO1Q5FWF5 840 aa18.72■□□□□ 0.59
PTMA-211ENST00000468027 RGS17Q9UGC6 210 aaPredicted RBP18.72■□□□□ 0.59
PTMA-211ENST00000468027 SPATA31A6Q5VVP1 1343 aa18.72■□□□□ 0.59
PTMA-211ENST00000468027 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
PTMA-211ENST00000468027 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
PTMA-211ENST00000468027 LRRC59Q96AG4 307 aaKnown RBP18.71■□□□□ 0.59
PTMA-211ENST00000468027 ATP7BP35670 1465 aa18.71■□□□□ 0.59
PTMA-211ENST00000468027 ALS2Q96Q42 1657 aa18.7■□□□□ 0.58
PTMA-211ENST00000468027 WASLO00401 505 aaPredicted RBP18.7■□□□□ 0.58
PTMA-211ENST00000468027 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
PTMA-211ENST00000468027 HIRIP3Q9BW71 556 aaPredicted RBP18.7■□□□□ 0.58
PTMA-211ENST00000468027 RALGAPBQ86X10 1494 aa18.7■□□□□ 0.58
PTMA-211ENST00000468027 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
PTMA-211ENST00000468027 CRYBG1Q9Y4K1 1723 aa18.68■□□□□ 0.58
PTMA-211ENST00000468027 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
PTMA-211ENST00000468027 FOXO3O43524 673 aa18.67■□□□□ 0.58
PTMA-211ENST00000468027 PHF8Q9UPP1 1060 aa18.66■□□□□ 0.58
PTMA-211ENST00000468027 CLSPNQ9HAW4 1339 aa18.65■□□□□ 0.58
PTMA-211ENST00000468027 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
PTMA-211ENST00000468027 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
PTMA-211ENST00000468027 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
PTMA-211ENST00000468027 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
PTMA-211ENST00000468027 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
PTMA-211ENST00000468027 AKAP12Q02952 1782 aa18.61■□□□□ 0.57
PTMA-211ENST00000468027 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
PTMA-211ENST00000468027 SBNO1A3KN83 1393 aa18.6■□□□□ 0.57
PTMA-211ENST00000468027 KRT28Q7Z3Y7 464 aa18.6■□□□□ 0.57
PTMA-211ENST00000468027 PMFBP1Q8TBY8 1022 aa18.6■□□□□ 0.57
PTMA-211ENST00000468027 NUDT16Q96DE0 195 aaKnown RBP18.6■□□□□ 0.57
PTMA-211ENST00000468027 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
PTMA-211ENST00000468027 POLR3AO14802 1390 aaPredicted RBP18.58■□□□□ 0.57
PTMA-211ENST00000468027 SBNO2Q9Y2G9 1366 aa18.58■□□□□ 0.57
PTMA-211ENST00000468027 POTEAQ6S8J7 498 aa18.58■□□□□ 0.56
PTMA-211ENST00000468027 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
PTMA-211ENST00000468027 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
PTMA-211ENST00000468027 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PTMA-211ENST00000468027 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
PTMA-211ENST00000468027 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
PTMA-211ENST00000468027 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
PTMA-211ENST00000468027 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
PTMA-211ENST00000468027 PHRF1Q9P1Y6 1649 aaKnown RBP18.54■□□□□ 0.56
PTMA-211ENST00000468027 CARD11Q9BXL7 1154 aa18.54■□□□□ 0.56
PTMA-211ENST00000468027 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
PTMA-211ENST00000468027 PSME1Q06323 249 aa18.53■□□□□ 0.56
PTMA-211ENST00000468027 PLCH1Q4KWH8 1693 aa18.53■□□□□ 0.56
PTMA-211ENST00000468027 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
PTMA-211ENST00000468027 PPIP5K1Q6PFW1 1433 aa18.52■□□□□ 0.56
PTMA-211ENST00000468027 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
PTMA-211ENST00000468027 NWD2Q9ULI1 1742 aa18.52■□□□□ 0.55
PTMA-211ENST00000468027 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
PTMA-211ENST00000468027 ACEP12821 1306 aa18.5■□□□□ 0.55
PTMA-211ENST00000468027 ARHGEF10O15013 1369 aa18.5■□□□□ 0.55
PTMA-211ENST00000468027 AFF2P51816 1311 aa18.49■□□□□ 0.55
PTMA-211ENST00000468027 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
PTMA-211ENST00000468027 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
PTMA-211ENST00000468027 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
PTMA-211ENST00000468027 PIK3C2AO00443 1686 aa18.48■□□□□ 0.55
PTMA-211ENST00000468027 SRPK2P78362 688 aaKnown RBP18.48■□□□□ 0.55
PTMA-211ENST00000468027 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
PTMA-211ENST00000468027 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
PTMA-211ENST00000468027 TESK2Q96S53 571 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms