RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 SOS2Q07890 1332 aaPredicted RBP28.24■■■□□ 2.11
COL1A2-204ENST00000467931 KNDC1Q76NI1 1749 aa28.24■■■□□ 2.11
COL1A2-204ENST00000467931 NGLY1Q96IV0 654 aa28.24■■■□□ 2.11
COL1A2-204ENST00000467931 QTRT2Q9H974 415 aaKnown RBP28.24■■■□□ 2.11
COL1A2-204ENST00000467931 SPATA31E1Q6ZUB1 1445 aa28.24■■■□□ 2.11
COL1A2-204ENST00000467931 ANKRD30BQ9BXX2 1392 aa28.23■■■□□ 2.11
COL1A2-204ENST00000467931 ESCO1Q5FWF5 840 aa28.21■■■□□ 2.11
COL1A2-204ENST00000467931 COL22A1Q8NFW1 1626 aaPredicted RBP28.21■■■□□ 2.11
COL1A2-204ENST00000467931 RGS12O14924 1447 aa28.19■■■□□ 2.1
COL1A2-204ENST00000467931 RBM6P78332 1123 aaKnown RBP28.19■■■□□ 2.1
COL1A2-204ENST00000467931 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
COL1A2-204ENST00000467931 NPHP3Q7Z494 1330 aa28.18■■■□□ 2.1
COL1A2-204ENST00000467931 LRPPRCP42704 1394 aaKnown RBP28.17■■■□□ 2.1
COL1A2-204ENST00000467931 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
COL1A2-204ENST00000467931 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
COL1A2-204ENST00000467931 TECPR2O15040 1411 aa28.17■■■□□ 2.1
COL1A2-204ENST00000467931 TMEM132EQ6IEE7 984 aa28.16■■■□□ 2.1
COL1A2-204ENST00000467931 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
COL1A2-204ENST00000467931 FMN2Q9NZ56 1722 aa28.15■■■□□ 2.1
COL1A2-204ENST00000467931 XPCQ01831 940 aaPredicted RBP28.14■■■□□ 2.1
COL1A2-204ENST00000467931 USP21Q9UK80 565 aa28.14■■■□□ 2.1
COL1A2-204ENST00000467931 PXDNQ92626 1479 aa28.14■■■□□ 2.09
COL1A2-204ENST00000467931 ABCC11Q96J66 1382 aa28.11■■■□□ 2.09
COL1A2-204ENST00000467931 PLEKHH1Q9ULM0 1364 aa28.11■■■□□ 2.09
COL1A2-204ENST00000467931 YTHDC2Q9H6S0 1430 aaKnown RBP28.11■■■□□ 2.09
COL1A2-204ENST00000467931 KIF1AQ12756 1690 aa28.11■■■□□ 2.09
COL1A2-204ENST00000467931 FOXO3O43524 673 aa28.11■■■□□ 2.09
COL1A2-204ENST00000467931 RGPD8O14715 1765 aaPredicted RBP28.11■■■□□ 2.09
COL1A2-204ENST00000467931 MYOM2P54296 1465 aa28.08■■■□□ 2.09
COL1A2-204ENST00000467931 TRPC5Q9UL62 973 aaPredicted RBP28.08■■■□□ 2.09
COL1A2-204ENST00000467931 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
COL1A2-204ENST00000467931 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
COL1A2-204ENST00000467931 ATRNO75882 1429 aa28.02■■■□□ 2.08
COL1A2-204ENST00000467931 DHX57Q6P158 1386 aaKnown RBP28.01■■■□□ 2.07
COL1A2-204ENST00000467931 ATAD2Q6PL18 1390 aa28■■■□□ 2.07
COL1A2-204ENST00000467931 CFAP70Q5T0N1 1121 aa28■■■□□ 2.07
COL1A2-204ENST00000467931 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
COL1A2-204ENST00000467931 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
COL1A2-204ENST00000467931 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
COL1A2-204ENST00000467931 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.98■■■□□ 2.07
COL1A2-204ENST00000467931 SAFB2Q14151 953 aaKnown RBP eCLIP27.98■■■□□ 2.07
COL1A2-204ENST00000467931 BCL9LQ86UU0 1499 aa27.95■■■□□ 2.07
COL1A2-204ENST00000467931 SPATA31A3Q5VYP0 1347 aa27.95■■■□□ 2.07
COL1A2-204ENST00000467931 KRT28Q7Z3Y7 464 aa27.95■■■□□ 2.06
COL1A2-204ENST00000467931 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
COL1A2-204ENST00000467931 USP32Q8NFA0 1604 aa27.95■■■□□ 2.06
COL1A2-204ENST00000467931 PRAM1Q96QH2 718 aa27.94■■■□□ 2.06
COL1A2-204ENST00000467931 HAP1P54257 671 aaPredicted RBP27.93■■■□□ 2.06
COL1A2-204ENST00000467931 PHF8Q9UPP1 1060 aa27.93■■■□□ 2.06
COL1A2-204ENST00000467931 PLEKHG5O94827 1062 aa27.92■■■□□ 2.06
COL1A2-204ENST00000467931 POGKQ9P215 609 aa27.91■■■□□ 2.06
COL1A2-204ENST00000467931 TNS3Q68CZ2 1445 aa27.91■■■□□ 2.06
COL1A2-204ENST00000467931 DLC1Q96QB1 1528 aa27.9■■■□□ 2.06
COL1A2-204ENST00000467931 ABCA3Q99758 1704 aa27.89■■■□□ 2.06
COL1A2-204ENST00000467931 PSME1Q06323 249 aa27.89■■■□□ 2.06
COL1A2-204ENST00000467931 PLCH1Q4KWH8 1693 aa27.88■■■□□ 2.05
COL1A2-204ENST00000467931 EP400Q96L91 3159 aa27.88■■■□□ 2.05
COL1A2-204ENST00000467931 LMOD2Q6P5Q4 547 aa27.88■■■□□ 2.05
COL1A2-204ENST00000467931 GJD4Q96KN9 370 aaPredicted RBP27.88■■■□□ 2.05
COL1A2-204ENST00000467931 ADGRB2O60241 1585 aa27.86■■■□□ 2.05
COL1A2-204ENST00000467931 SLIT2O94813 1529 aa27.86■■■□□ 2.05
COL1A2-204ENST00000467931 UNC5CLQ8IV45 518 aa27.85■■■□□ 2.05
COL1A2-204ENST00000467931 ADGRB1O14514 1584 aa27.85■■■□□ 2.05
COL1A2-204ENST00000467931 GLI3P10071 1580 aa27.85■■■□□ 2.05
COL1A2-204ENST00000467931 BRWD3Q6RI45 1802 aa27.84■■■□□ 2.05
COL1A2-204ENST00000467931 KDM2AQ9Y2K7 1162 aa27.84■■■□□ 2.05
COL1A2-204ENST00000467931 RALGAPBQ86X10 1494 aa27.83■■■□□ 2.05
COL1A2-204ENST00000467931 PMFBP1Q8TBY8 1022 aa27.83■■■□□ 2.05
COL1A2-204ENST00000467931 CABLES1Q8TDN4 633 aa27.83■■■□□ 2.05
COL1A2-204ENST00000467931 TRAK1Q9UPV9 953 aa27.83■■■□□ 2.05
COL1A2-204ENST00000467931 NWD2Q9ULI1 1742 aa27.83■■■□□ 2.05
COL1A2-204ENST00000467931 ANKARQ7Z5J8 1434 aa27.82■■■□□ 2.04
COL1A2-204ENST00000467931 HIRIP3Q9BW71 556 aaPredicted RBP27.81■■■□□ 2.04
COL1A2-204ENST00000467931 SBNO1A3KN83 1393 aa27.81■■■□□ 2.04
COL1A2-204ENST00000467931 ARHGEF10O15013 1369 aa27.81■■■□□ 2.04
COL1A2-204ENST00000467931 DCAF11Q8TEB1 546 aa27.8■■■□□ 2.04
COL1A2-204ENST00000467931 MINK1Q8N4C8 1332 aaPredicted RBP27.79■■■□□ 2.04
COL1A2-204ENST00000467931 TRPM3Q9HCF6 1732 aaPredicted RBP27.78■■■□□ 2.04
COL1A2-204ENST00000467931 CCDC9Q9Y3X0 531 aaKnown RBP27.77■■■□□ 2.04
COL1A2-204ENST00000467931 ARHGEF28Q8N1W1 1705 aaKnown RBP27.75■■■□□ 2.03
COL1A2-204ENST00000467931 EIF3AQ14152 1382 aaKnown RBP27.75■■■□□ 2.03
COL1A2-204ENST00000467931 TULP4Q9NRJ4 1543 aa27.75■■■□□ 2.03
COL1A2-204ENST00000467931 CCDC125Q86Z20 511 aa27.74■■■□□ 2.03
COL1A2-204ENST00000467931 ITSN1Q15811 1721 aa27.74■■■□□ 2.03
COL1A2-204ENST00000467931 ALS2Q96Q42 1657 aa27.74■■■□□ 2.03
COL1A2-204ENST00000467931 GPRASP1Q5JY77 1395 aa27.73■■■□□ 2.03
COL1A2-204ENST00000467931 ZRANB1Q9UGI0 708 aa27.71■■■□□ 2.03
COL1A2-204ENST00000467931 VPS72Q15906 364 aa27.7■■■□□ 2.02
COL1A2-204ENST00000467931 NRAPQ86VF7 1730 aa27.7■■■□□ 2.02
COL1A2-204ENST00000467931 SEPT12Q8IYM1 358 aa27.69■■■□□ 2.02
COL1A2-204ENST00000467931 PRR36Q9H6K5 1346 aa27.68■■■□□ 2.02
COL1A2-204ENST00000467931 WASLO00401 505 aaPredicted RBP27.68■■■□□ 2.02
COL1A2-204ENST00000467931 COL14A1Q05707 1796 aaKnown RBP27.68■■■□□ 2.02
COL1A2-204ENST00000467931 A0A0G2JS52 829 aa27.67■■■□□ 2.02
COL1A2-204ENST00000467931 MYT1Q01538 1121 aa27.67■■■□□ 2.02
COL1A2-204ENST00000467931 STAC3Q96MF2 364 aa27.67■■■□□ 2.02
COL1A2-204ENST00000467931 NGDNQ8NEJ9 315 aaKnown RBP27.66■■■□□ 2.02
COL1A2-204ENST00000467931 BLMP54132 1417 aaPredicted RBP27.66■■■□□ 2.02
COL1A2-204ENST00000467931 CRYBG1Q9Y4K1 1723 aa27.65■■■□□ 2.02
COL1A2-204ENST00000467931 FAM83GA6ND36 823 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms