RNA–Protein interactions for RNA: ENST00000467816.1

PTMA-210, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 378 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-210ENST00000467816 ADGRB2O60241 1585 aa18.99■□□□□ 0.63
PTMA-210ENST00000467816 PROSER2Q86WR7 435 aaPredicted RBP18.99■□□□□ 0.63
PTMA-210ENST00000467816 NALCNQ8IZF0 1738 aa18.97■□□□□ 0.63
PTMA-210ENST00000467816 LRRC7Q96NW7 1537 aa18.97■□□□□ 0.63
PTMA-210ENST00000467816 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
PTMA-210ENST00000467816 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
PTMA-210ENST00000467816 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
PTMA-210ENST00000467816 TMF1P82094 1093 aa18.94■□□□□ 0.62
PTMA-210ENST00000467816 SAFB2Q14151 953 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTMA-210ENST00000467816 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
PTMA-210ENST00000467816 TULP4Q9NRJ4 1543 aa18.93■□□□□ 0.62
PTMA-210ENST00000467816 CDC42BPGQ6DT37 1551 aa18.92■□□□□ 0.62
PTMA-210ENST00000467816 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
PTMA-210ENST00000467816 MINK1Q8N4C8 1332 aaPredicted RBP18.92■□□□□ 0.62
PTMA-210ENST00000467816 WASLO00401 505 aaPredicted RBP18.91■□□□□ 0.62
PTMA-210ENST00000467816 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
PTMA-210ENST00000467816 C19orf44Q9H6X5 657 aa18.91■□□□□ 0.62
PTMA-210ENST00000467816 DCCP43146 1447 aa18.91■□□□□ 0.62
PTMA-210ENST00000467816 FMN2Q9NZ56 1722 aa18.9■□□□□ 0.62
PTMA-210ENST00000467816 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
PTMA-210ENST00000467816 C11orf95C9JLR9 678 aaPredicted RBP18.89■□□□□ 0.61
PTMA-210ENST00000467816 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.61
PTMA-210ENST00000467816 RBM33Q96EV2 1170 aaKnown RBP18.88■□□□□ 0.61
PTMA-210ENST00000467816 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
PTMA-210ENST00000467816 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
PTMA-210ENST00000467816 IQSEC2Q5JU85 1478 aa18.86■□□□□ 0.61
PTMA-210ENST00000467816 MSH6P52701 1360 aa18.86■□□□□ 0.61
PTMA-210ENST00000467816 C14orf37Q86TY3 774 aa18.85■□□□□ 0.61
PTMA-210ENST00000467816 ITSN1Q15811 1721 aa18.85■□□□□ 0.61
PTMA-210ENST00000467816 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
PTMA-210ENST00000467816 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
PTMA-210ENST00000467816 KIF7Q2M1P5 1343 aa18.84■□□□□ 0.61
PTMA-210ENST00000467816 WASHC2AQ641Q2 1341 aa18.84■□□□□ 0.61
PTMA-210ENST00000467816 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
PTMA-210ENST00000467816 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
PTMA-210ENST00000467816 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
PTMA-210ENST00000467816 ATAD2Q6PL18 1390 aa18.82■□□□□ 0.6
PTMA-210ENST00000467816 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
PTMA-210ENST00000467816 CABP2Q9NPB3 220 aa18.82■□□□□ 0.6
PTMA-210ENST00000467816 ATP7BP35670 1465 aa18.82■□□□□ 0.6
PTMA-210ENST00000467816 MYOM1P52179 1685 aa18.82■□□□□ 0.6
PTMA-210ENST00000467816 ATF3P18847 181 aa18.81■□□□□ 0.6
PTMA-210ENST00000467816 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
PTMA-210ENST00000467816 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
PTMA-210ENST00000467816 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
PTMA-210ENST00000467816 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
PTMA-210ENST00000467816 MST1RQ04912 1400 aa18.79■□□□□ 0.6
PTMA-210ENST00000467816 C1orf167Q5SNV9 1468 aa18.77■□□□□ 0.59
PTMA-210ENST00000467816 PLEKHG3A1L390 1219 aa18.76■□□□□ 0.59
PTMA-210ENST00000467816 CERKQ8TCT0 537 aa18.75■□□□□ 0.59
PTMA-210ENST00000467816 AKAP12Q02952 1782 aa18.75■□□□□ 0.59
PTMA-210ENST00000467816 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
PTMA-210ENST00000467816 KIF1AQ12756 1690 aa18.74■□□□□ 0.59
PTMA-210ENST00000467816 CABP1Q9NZU7 370 aa18.73■□□□□ 0.59
PTMA-210ENST00000467816 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
PTMA-210ENST00000467816 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
PTMA-210ENST00000467816 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
PTMA-210ENST00000467816 SLC12A5Q9H2X9 1139 aa18.72■□□□□ 0.59
PTMA-210ENST00000467816 CD163L1Q9NR16 1453 aa18.71■□□□□ 0.59
PTMA-210ENST00000467816 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
PTMA-210ENST00000467816 ANKRD36BQ8N2N9 1353 aa18.7■□□□□ 0.58
PTMA-210ENST00000467816 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
PTMA-210ENST00000467816 MON2Q7Z3U7 1717 aa18.7■□□□□ 0.58
PTMA-210ENST00000467816 TMC1Q8TDI8 760 aa18.7■□□□□ 0.58
PTMA-210ENST00000467816 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
PTMA-210ENST00000467816 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
PTMA-210ENST00000467816 TOM1O60784 492 aa18.69■□□□□ 0.58
PTMA-210ENST00000467816 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
PTMA-210ENST00000467816 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
PTMA-210ENST00000467816 ORAI2Q96SN7 254 aa18.68■□□□□ 0.58
PTMA-210ENST00000467816 ACEP12821 1306 aa18.68■□□□□ 0.58
PTMA-210ENST00000467816 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
PTMA-210ENST00000467816 HDGFL2Q7Z4V5 671 aaPredicted RBP18.66■□□□□ 0.58
PTMA-210ENST00000467816 PANK3Q9H999 370 aa18.66■□□□□ 0.58
PTMA-210ENST00000467816 BRD4O60885 1362 aaPredicted RBP18.66■□□□□ 0.58
PTMA-210ENST00000467816 NHSL1Q5SYE7 1610 aa18.65■□□□□ 0.58
PTMA-210ENST00000467816 PER1O15534 1290 aaPredicted RBP18.65■□□□□ 0.58
PTMA-210ENST00000467816 BRINP3Q76B58 766 aa18.65■□□□□ 0.58
PTMA-210ENST00000467816 PMFBP1Q8TBY8 1022 aa18.65■□□□□ 0.58
PTMA-210ENST00000467816 ROBO1Q9Y6N7 1651 aa18.65■□□□□ 0.58
PTMA-210ENST00000467816 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
PTMA-210ENST00000467816 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PTMA-210ENST00000467816 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
PTMA-210ENST00000467816 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
PTMA-210ENST00000467816 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
PTMA-210ENST00000467816 CARD14Q9BXL6 1004 aa18.62■□□□□ 0.57
PTMA-210ENST00000467816 USP6P35125 1406 aa18.62■□□□□ 0.57
PTMA-210ENST00000467816 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
PTMA-210ENST00000467816 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
PTMA-210ENST00000467816 NPHP3Q7Z494 1330 aa18.61■□□□□ 0.57
PTMA-210ENST00000467816 UBAP1LF5GYI3 381 aa18.61■□□□□ 0.57
PTMA-210ENST00000467816 FOXO3O43524 673 aa18.6■□□□□ 0.57
PTMA-210ENST00000467816 AHDC1Q5TGY3 1603 aaPredicted RBP18.6■□□□□ 0.57
PTMA-210ENST00000467816 PSME1Q06323 249 aa18.58■□□□□ 0.56
PTMA-210ENST00000467816 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.56
PTMA-210ENST00000467816 PXDNQ92626 1479 aa18.58■□□□□ 0.56
PTMA-210ENST00000467816 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
PTMA-210ENST00000467816 NPC1L1Q9UHC9 1359 aa18.57■□□□□ 0.56
PTMA-210ENST00000467816 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
PTMA-210ENST00000467816 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms