RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-208ENST00000467722 ATAD2Q6PL18 1390 aa36.46■■■■□ 3.43
SPECC1-208ENST00000467722 RPGRIP1LQ68CZ1 1315 aa36.46■■■■□ 3.43
SPECC1-208ENST00000467722 MYOM2P54296 1465 aa36.45■■■■□ 3.43
SPECC1-208ENST00000467722 USP21Q9UK80 565 aa36.45■■■■□ 3.43
SPECC1-208ENST00000467722 ATRNO75882 1429 aa36.44■■■■□ 3.42
SPECC1-208ENST00000467722 FNBP4Q8N3X1 1017 aaPredicted RBP36.44■■■■□ 3.42
SPECC1-208ENST00000467722 TRPC5Q9UL62 973 aaPredicted RBP36.42■■■■□ 3.42
SPECC1-208ENST00000467722 PXDNQ92626 1479 aa36.42■■■■□ 3.42
SPECC1-208ENST00000467722 NPHP3Q7Z494 1330 aa36.35■■■■□ 3.41
SPECC1-208ENST00000467722 IFT172Q9UG01 1749 aa36.34■■■■□ 3.41
SPECC1-208ENST00000467722 BCL9LQ86UU0 1499 aa36.33■■■■□ 3.41
SPECC1-208ENST00000467722 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.33■■■■□ 3.41
SPECC1-208ENST00000467722 KNDC1Q76NI1 1749 aa36.31■■■■□ 3.4
SPECC1-208ENST00000467722 SLC4A1APQ9BWU0 796 aaKnown RBP36.31■■■■□ 3.4
SPECC1-208ENST00000467722 TECPR2O15040 1411 aa36.31■■■■□ 3.4
SPECC1-208ENST00000467722 ESCO1Q5FWF5 840 aa36.3■■■■□ 3.4
SPECC1-208ENST00000467722 FMN2Q9NZ56 1722 aa36.26■■■■□ 3.4
SPECC1-208ENST00000467722 FOXO3O43524 673 aa36.23■■■■□ 3.39
SPECC1-208ENST00000467722 ADGRF5Q8IZF2 1346 aa36.23■■■■□ 3.39
SPECC1-208ENST00000467722 KIF1AQ12756 1690 aa36.23■■■■□ 3.39
SPECC1-208ENST00000467722 LRPPRCP42704 1394 aaKnown RBP36.21■■■■□ 3.39
SPECC1-208ENST00000467722 XPCQ01831 940 aaPredicted RBP36.21■■■■□ 3.39
SPECC1-208ENST00000467722 SPATA31E1Q6ZUB1 1445 aa36.21■■■■□ 3.39
SPECC1-208ENST00000467722 GLI3P10071 1580 aa36.18■■■■□ 3.38
SPECC1-208ENST00000467722 CCDC144AA2RUR9 1427 aa36.17■■■■□ 3.38
SPECC1-208ENST00000467722 GJD4Q96KN9 370 aaPredicted RBP36.17■■■■□ 3.38
SPECC1-208ENST00000467722 ABCC11Q96J66 1382 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 USP32Q8NFA0 1604 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 FOXD1Q16676 465 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 WAPLQ7Z5K2 1190 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 CCDC125Q86Z20 511 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 SLIT2O94813 1529 aa36.16■■■■□ 3.38
SPECC1-208ENST00000467722 ANKRD30BQ9BXX2 1392 aa36.15■■■■□ 3.38
SPECC1-208ENST00000467722 ZRANB1Q9UGI0 708 aa36.15■■■■□ 3.38
SPECC1-208ENST00000467722 PLEKHH1Q9ULM0 1364 aa36.15■■■■□ 3.38
SPECC1-208ENST00000467722 STK26Q9P289 416 aa36.14■■■■□ 3.38
SPECC1-208ENST00000467722 PIK3C2GO75747 1445 aa36.14■■■■□ 3.38
SPECC1-208ENST00000467722 BRWD3Q6RI45 1802 aa36.13■■■■□ 3.37
SPECC1-208ENST00000467722 NUTM2FA1L443 756 aa36.13■■■■□ 3.37
SPECC1-208ENST00000467722 RGPD8O14715 1765 aaPredicted RBP36.12■■■■□ 3.37
SPECC1-208ENST00000467722 RALGAPBQ86X10 1494 aa36.11■■■■□ 3.37
SPECC1-208ENST00000467722 SPATA31A3Q5VYP0 1347 aa36.1■■■■□ 3.37
SPECC1-208ENST00000467722 RGL3Q3MIN7 710 aa36.08■■■■□ 3.37
SPECC1-208ENST00000467722 YTHDC2Q9H6S0 1430 aaKnown RBP36.08■■■■□ 3.37
SPECC1-208ENST00000467722 UNC5CLQ8IV45 518 aa36.07■■■■□ 3.36
SPECC1-208ENST00000467722 ABCA3Q99758 1704 aa36.06■■■■□ 3.36
SPECC1-208ENST00000467722 TMEM132EQ6IEE7 984 aa36.06■■■■□ 3.36
SPECC1-208ENST00000467722 PLCH1Q4KWH8 1693 aa36.05■■■■□ 3.36
SPECC1-208ENST00000467722 NWD2Q9ULI1 1742 aa36.04■■■■□ 3.36
SPECC1-208ENST00000467722 BLMP54132 1417 aaPredicted RBP36.03■■■■□ 3.36
SPECC1-208ENST00000467722 TNS3Q68CZ2 1445 aa36■■■■□ 3.35
SPECC1-208ENST00000467722 KRT28Q7Z3Y7 464 aa35.98■■■■□ 3.35
SPECC1-208ENST00000467722 SIRT1Q96EB6 747 aa35.97■■■■□ 3.35
SPECC1-208ENST00000467722 MPHOSPH9Q99550 1183 aa35.96■■■■□ 3.35
SPECC1-208ENST00000467722 NRXN1Q9ULB1 1477 aa35.96■■■■□ 3.35
SPECC1-208ENST00000467722 PHF8Q9UPP1 1060 aa35.92■■■■□ 3.34
SPECC1-208ENST00000467722 SBNO1A3KN83 1393 aa35.9■■■■□ 3.34
SPECC1-208ENST00000467722 VPS72Q15906 364 aa35.9■■■■□ 3.34
SPECC1-208ENST00000467722 C14orf93Q9H972 538 aaKnown RBP35.89■■■■□ 3.34
SPECC1-208ENST00000467722 PSME1Q06323 249 aa35.87■■■■□ 3.33
SPECC1-208ENST00000467722 NRAPQ86VF7 1730 aa35.87■■■■□ 3.33
SPECC1-208ENST00000467722 SEPT12Q8IYM1 358 aa35.87■■■■□ 3.33
SPECC1-208ENST00000467722 CABLES1Q8TDN4 633 aa35.87■■■■□ 3.33
SPECC1-208ENST00000467722 ADGRB2O60241 1585 aa35.85■■■■□ 3.33
SPECC1-208ENST00000467722 ONECUT3O60422 494 aaPredicted RBP35.85■■■■□ 3.33
SPECC1-208ENST00000467722 HAP1P54257 671 aaPredicted RBP35.85■■■■□ 3.33
SPECC1-208ENST00000467722 DEFB132Q7Z7B7 95 aa35.85■■■■□ 3.33
SPECC1-208ENST00000467722 ARHGEF10O15013 1369 aa35.85■■■■□ 3.33
SPECC1-208ENST00000467722 TRPM3Q9HCF6 1732 aaPredicted RBP35.85■■■■□ 3.33
SPECC1-208ENST00000467722 DLC1Q96QB1 1528 aa35.84■■■■□ 3.33
SPECC1-208ENST00000467722 DHX57Q6P158 1386 aaKnown RBP35.84■■■■□ 3.33
SPECC1-208ENST00000467722 LRP5O75197 1615 aa35.83■■■■□ 3.33
SPECC1-208ENST00000467722 ANKARQ7Z5J8 1434 aa35.82■■■■□ 3.32
SPECC1-208ENST00000467722 CFAP70Q5T0N1 1121 aa35.81■■■■□ 3.32
SPECC1-208ENST00000467722 ALS2Q96Q42 1657 aa35.8■■■■□ 3.32
SPECC1-208ENST00000467722 PRAM1Q96QH2 718 aa35.79■■■■□ 3.32
SPECC1-208ENST00000467722 SF3B2Q13435 895 aaKnown RBP35.77■■■■□ 3.32
SPECC1-208ENST00000467722 KRT27Q7Z3Y8 459 aa35.76■■■■□ 3.32
SPECC1-208ENST00000467722 SAFB2Q14151 953 aaKnown RBP eCLIP35.75■■■■□ 3.31
SPECC1-208ENST00000467722 CCDC9Q9Y3X0 531 aaKnown RBP35.75■■■■□ 3.31
SPECC1-208ENST00000467722 ADGRB1O14514 1584 aa35.75■■■■□ 3.31
SPECC1-208ENST00000467722 COL14A1Q05707 1796 aaKnown RBP35.74■■■■□ 3.31
SPECC1-208ENST00000467722 PLEKHG5O94827 1062 aa35.74■■■■□ 3.31
SPECC1-208ENST00000467722 LMOD2Q6P5Q4 547 aa35.74■■■■□ 3.31
SPECC1-208ENST00000467722 CRYBG1Q9Y4K1 1723 aa35.74■■■■□ 3.31
SPECC1-208ENST00000467722 FAM83GA6ND36 823 aa35.73■■■■□ 3.31
SPECC1-208ENST00000467722 PMFBP1Q8TBY8 1022 aa35.7■■■■□ 3.31
SPECC1-208ENST00000467722 RGPD1P0DJD0 1748 aa35.68■■■■□ 3.3
SPECC1-208ENST00000467722 ACIN1Q9UKV3 1341 aaKnown RBP35.67■■■■□ 3.3
SPECC1-208ENST00000467722 POGKQ9P215 609 aa35.66■■■■□ 3.3
SPECC1-208ENST00000467722 TULP4Q9NRJ4 1543 aa35.65■■■■□ 3.3
SPECC1-208ENST00000467722 THSD7AQ9UPZ6 1657 aa35.63■■■■□ 3.29
SPECC1-208ENST00000467722 FAM98CQ17RN3 349 aaKnown RBP35.62■■■■□ 3.29
SPECC1-208ENST00000467722 BTG4Q9NY30 223 aa35.62■■■■□ 3.29
SPECC1-208ENST00000467722 BAG6P46379 1132 aa35.61■■■■□ 3.29
SPECC1-208ENST00000467722 EIF3AQ14152 1382 aaKnown RBP35.61■■■■□ 3.29
SPECC1-208ENST00000467722 TNS1Q9HBL0 1735 aaKnown RBP35.6■■■■□ 3.29
SPECC1-208ENST00000467722 PRR36Q9H6K5 1346 aa35.6■■■■□ 3.29
SPECC1-208ENST00000467722 A0A0G2JS52 829 aa35.6■■■■□ 3.29
SPECC1-208ENST00000467722 MYT1Q01538 1121 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms