RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
PRPF3-203ENST00000467514 HFM1A2PYH4 1435 aa16.27■□□□□ 0.19
PRPF3-203ENST00000467514 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
PRPF3-203ENST00000467514 COL22A1Q8NFW1 1626 aaPredicted RBP16.26■□□□□ 0.19
PRPF3-203ENST00000467514 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
PRPF3-203ENST00000467514 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
PRPF3-203ENST00000467514 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
PRPF3-203ENST00000467514 NAIPQ13075 1403 aa16.24■□□□□ 0.19
PRPF3-203ENST00000467514 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
PRPF3-203ENST00000467514 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
PRPF3-203ENST00000467514 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
PRPF3-203ENST00000467514 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
PRPF3-203ENST00000467514 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
PRPF3-203ENST00000467514 BLMP54132 1417 aaPredicted RBP16.21■□□□□ 0.19
PRPF3-203ENST00000467514 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
PRPF3-203ENST00000467514 MYOM2P54296 1465 aa16.21■□□□□ 0.19
PRPF3-203ENST00000467514 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
PRPF3-203ENST00000467514 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.19■□□□□ 0.18
PRPF3-203ENST00000467514 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
PRPF3-203ENST00000467514 A0A0G2JS52 829 aa16.19■□□□□ 0.18
PRPF3-203ENST00000467514 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
PRPF3-203ENST00000467514 MYT1Q01538 1121 aa16.19■□□□□ 0.18
PRPF3-203ENST00000467514 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
PRPF3-203ENST00000467514 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
PRPF3-203ENST00000467514 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
PRPF3-203ENST00000467514 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
PRPF3-203ENST00000467514 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
PRPF3-203ENST00000467514 FOXO3O43524 673 aa16.17■□□□□ 0.18
PRPF3-203ENST00000467514 PLEKHG5O94827 1062 aa16.17■□□□□ 0.18
PRPF3-203ENST00000467514 BRWD3Q6RI45 1802 aa16.17■□□□□ 0.18
PRPF3-203ENST00000467514 CDC42BPGQ6DT37 1551 aa16.17■□□□□ 0.18
PRPF3-203ENST00000467514 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
PRPF3-203ENST00000467514 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
PRPF3-203ENST00000467514 PXDNQ92626 1479 aa16.16■□□□□ 0.18
PRPF3-203ENST00000467514 LRP5O75197 1615 aa16.16■□□□□ 0.18
PRPF3-203ENST00000467514 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
PRPF3-203ENST00000467514 GLI3P10071 1580 aa16.14■□□□□ 0.17
PRPF3-203ENST00000467514 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
PRPF3-203ENST00000467514 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
PRPF3-203ENST00000467514 SEPT12Q8IYM1 358 aa16.12■□□□□ 0.17
PRPF3-203ENST00000467514 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
PRPF3-203ENST00000467514 BAG6P46379 1132 aa16.11■□□□□ 0.17
PRPF3-203ENST00000467514 STK26Q9P289 416 aa16.11■□□□□ 0.17
PRPF3-203ENST00000467514 PPLO60437 1756 aa16.1■□□□□ 0.17
PRPF3-203ENST00000467514 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
PRPF3-203ENST00000467514 KIF1AQ12756 1690 aa16.1■□□□□ 0.17
PRPF3-203ENST00000467514 SLIT2O94813 1529 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 PLCH1Q4KWH8 1693 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 KRT27Q7Z3Y8 459 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
PRPF3-203ENST00000467514 SPATA31A3Q5VYP0 1347 aa16.06■□□□□ 0.16
PRPF3-203ENST00000467514 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
PRPF3-203ENST00000467514 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
PRPF3-203ENST00000467514 VPS72Q15906 364 aa16.05■□□□□ 0.16
PRPF3-203ENST00000467514 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
PRPF3-203ENST00000467514 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
PRPF3-203ENST00000467514 FMN2Q9NZ56 1722 aa16.05■□□□□ 0.16
PRPF3-203ENST00000467514 PSME1Q06323 249 aa16.04■□□□□ 0.16
PRPF3-203ENST00000467514 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
PRPF3-203ENST00000467514 CABLES1Q8TDN4 633 aa16.03■□□□□ 0.16
PRPF3-203ENST00000467514 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
PRPF3-203ENST00000467514 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
PRPF3-203ENST00000467514 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
PRPF3-203ENST00000467514 KNDC1Q76NI1 1749 aa16.01■□□□□ 0.15
PRPF3-203ENST00000467514 RGPD8O14715 1765 aaPredicted RBP16■□□□□ 0.15
PRPF3-203ENST00000467514 ABCA3Q99758 1704 aa16■□□□□ 0.15
PRPF3-203ENST00000467514 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
PRPF3-203ENST00000467514 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
PRPF3-203ENST00000467514 PHF8Q9UPP1 1060 aa16■□□□□ 0.15
PRPF3-203ENST00000467514 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
PRPF3-203ENST00000467514 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
PRPF3-203ENST00000467514 ARHGEF10O15013 1369 aa15.99■□□□□ 0.15
PRPF3-203ENST00000467514 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
PRPF3-203ENST00000467514 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
PRPF3-203ENST00000467514 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
PRPF3-203ENST00000467514 TECPR2O15040 1411 aa15.97■□□□□ 0.15
PRPF3-203ENST00000467514 ONECUT3O60422 494 aaPredicted RBP15.95■□□□□ 0.14
PRPF3-203ENST00000467514 FAM182BQ5T319 152 aa15.95■□□□□ 0.14
PRPF3-203ENST00000467514 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
PRPF3-203ENST00000467514 ADGRB2O60241 1585 aa15.95■□□□□ 0.14
PRPF3-203ENST00000467514 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
PRPF3-203ENST00000467514 YY1P25490 414 aa15.94■□□□□ 0.14
PRPF3-203ENST00000467514 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
PRPF3-203ENST00000467514 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
PRPF3-203ENST00000467514 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
PRPF3-203ENST00000467514 YTHDC2Q9H6S0 1430 aaKnown RBP15.94■□□□□ 0.14
PRPF3-203ENST00000467514 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
PRPF3-203ENST00000467514 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
PRPF3-203ENST00000467514 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
PRPF3-203ENST00000467514 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
PRPF3-203ENST00000467514 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
PRPF3-203ENST00000467514 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
PRPF3-203ENST00000467514 NRXN1Q9ULB1 1477 aa15.91■□□□□ 0.14
PRPF3-203ENST00000467514 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
PRPF3-203ENST00000467514 EZH2Q15910 746 aaKnown RBP15.9■□□□□ 0.14
PRPF3-203ENST00000467514 PPP1R1BQ9UD71 204 aaPredicted RBP15.9■□□□□ 0.14
PRPF3-203ENST00000467514 GPRASP1Q5JY77 1395 aa15.89■□□□□ 0.13
PRPF3-203ENST00000467514 POGKQ9P215 609 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms