RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
APOBEC1-202ENST00000467171 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
APOBEC1-202ENST00000467171 SBNO2Q9Y2G9 1366 aa13.11□□□□□ -0.31
APOBEC1-202ENST00000467171 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
APOBEC1-202ENST00000467171 IQGAP1P46940 1657 aa13.1□□□□□ -0.31
APOBEC1-202ENST00000467171 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
APOBEC1-202ENST00000467171 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
APOBEC1-202ENST00000467171 PPLO60437 1756 aa13.09□□□□□ -0.31
APOBEC1-202ENST00000467171 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
APOBEC1-202ENST00000467171 FKBP8Q14318 412 aa13.08□□□□□ -0.32
APOBEC1-202ENST00000467171 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
APOBEC1-202ENST00000467171 CLTCQ00610 1675 aaKnown RBP13.07□□□□□ -0.32
APOBEC1-202ENST00000467171 PER1O15534 1290 aaPredicted RBP13.06□□□□□ -0.32
APOBEC1-202ENST00000467171 RALBP1Q15311 655 aa13.06□□□□□ -0.32
APOBEC1-202ENST00000467171 TNRQ92752 1358 aa13.06□□□□□ -0.32
APOBEC1-202ENST00000467171 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
APOBEC1-202ENST00000467171 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
APOBEC1-202ENST00000467171 CENPJQ9HC77 1338 aaPredicted RBP13.05□□□□□ -0.32
APOBEC1-202ENST00000467171 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
APOBEC1-202ENST00000467171 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
APOBEC1-202ENST00000467171 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
APOBEC1-202ENST00000467171 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
APOBEC1-202ENST00000467171 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
APOBEC1-202ENST00000467171 PANK3Q9H999 370 aa13.02□□□□□ -0.33
APOBEC1-202ENST00000467171 NUTM2DQ5VT03 806 aaPredicted RBP13.01□□□□□ -0.33
APOBEC1-202ENST00000467171 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
APOBEC1-202ENST00000467171 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
APOBEC1-202ENST00000467171 NLRP1Q9C000 1473 aa13.01□□□□□ -0.33
APOBEC1-202ENST00000467171 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
APOBEC1-202ENST00000467171 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
APOBEC1-202ENST00000467171 MRS2Q9HD23 443 aa13□□□□□ -0.33
APOBEC1-202ENST00000467171 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
APOBEC1-202ENST00000467171 NPC1L1Q9UHC9 1359 aa12.99□□□□□ -0.33
APOBEC1-202ENST00000467171 MYBBP1AQ9BQG0 1328 aaKnown RBP12.99□□□□□ -0.33
APOBEC1-202ENST00000467171 CCDC184Q52MB2 194 aa12.99□□□□□ -0.33
APOBEC1-202ENST00000467171 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
APOBEC1-202ENST00000467171 TMEM2Q9UHN6 1383 aa12.98□□□□□ -0.33
APOBEC1-202ENST00000467171 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
APOBEC1-202ENST00000467171 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
APOBEC1-202ENST00000467171 YTHDC2Q9H6S0 1430 aaKnown RBP12.97□□□□□ -0.33
APOBEC1-202ENST00000467171 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
APOBEC1-202ENST00000467171 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
APOBEC1-202ENST00000467171 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
APOBEC1-202ENST00000467171 ALKQ9UM73 1620 aa12.96□□□□□ -0.33
APOBEC1-202ENST00000467171 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
APOBEC1-202ENST00000467171 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
APOBEC1-202ENST00000467171 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
APOBEC1-202ENST00000467171 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
APOBEC1-202ENST00000467171 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
APOBEC1-202ENST00000467171 DLC1Q96QB1 1528 aa12.94□□□□□ -0.34
APOBEC1-202ENST00000467171 AMER1Q5JTC6 1135 aaPredicted RBP12.94□□□□□ -0.34
APOBEC1-202ENST00000467171 PTPRMP28827 1452 aa12.93□□□□□ -0.34
APOBEC1-202ENST00000467171 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
APOBEC1-202ENST00000467171 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
APOBEC1-202ENST00000467171 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
APOBEC1-202ENST00000467171 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
APOBEC1-202ENST00000467171 PLEKHG1Q9ULL1 1385 aa12.92□□□□□ -0.34
APOBEC1-202ENST00000467171 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
APOBEC1-202ENST00000467171 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
APOBEC1-202ENST00000467171 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
APOBEC1-202ENST00000467171 STK26Q9P289 416 aa12.91□□□□□ -0.34
APOBEC1-202ENST00000467171 INSRP06213 1382 aa12.91□□□□□ -0.34
APOBEC1-202ENST00000467171 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
APOBEC1-202ENST00000467171 MYO5BQ9ULV0 1848 aa12.9□□□□□ -0.34
APOBEC1-202ENST00000467171 TECPR2O15040 1411 aa12.9□□□□□ -0.34
APOBEC1-202ENST00000467171 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
APOBEC1-202ENST00000467171 POGKQ9P215 609 aa12.9□□□□□ -0.34
APOBEC1-202ENST00000467171 SLIT1O75093 1534 aa12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 THEMISQ8N1K5 641 aaPredicted RBP12.89□□□□□ -0.35
APOBEC1-202ENST00000467171 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 QRICH2Q9H0J4 1663 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
APOBEC1-202ENST00000467171 MYOM1P52179 1685 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 MED14O60244 1454 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 METP08581 1390 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 LTKP29376 864 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
APOBEC1-202ENST00000467171 C3P01024 1663 aa12.86□□□□□ -0.35
APOBEC1-202ENST00000467171 CNGB1Q14028 1251 aaPredicted RBP12.86□□□□□ -0.35
APOBEC1-202ENST00000467171 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
APOBEC1-202ENST00000467171 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
APOBEC1-202ENST00000467171 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
APOBEC1-202ENST00000467171 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
APOBEC1-202ENST00000467171 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
APOBEC1-202ENST00000467171 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
APOBEC1-202ENST00000467171 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms