RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 KNSTRNQ9Y448 316 aa13.88□□□□□ -0.19
SFXN3-204ENST00000466982 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 TMF1P82094 1093 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 BCL2L13Q9BXK5 485 aa13.87□□□□□ -0.19
SFXN3-204ENST00000466982 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
SFXN3-204ENST00000466982 TNPO1Q92973 898 aaKnown RBP13.86□□□□□ -0.19
SFXN3-204ENST00000466982 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 RTEL1-TNFRSF6BF6WH68 1400 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 E9PSI1 815 aa13.86□□□□□ -0.19
SFXN3-204ENST00000466982 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
SFXN3-204ENST00000466982 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
SFXN3-204ENST00000466982 OFD1O75665 1012 aa13.84□□□□□ -0.19
SFXN3-204ENST00000466982 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
SFXN3-204ENST00000466982 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
SFXN3-204ENST00000466982 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
SFXN3-204ENST00000466982 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.19
SFXN3-204ENST00000466982 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.19
SFXN3-204ENST00000466982 GTPBP4Q9BZE4 634 aaKnown RBP13.83□□□□□ -0.19
SFXN3-204ENST00000466982 R3HCC1Q9Y3T6 440 aaKnown RBP13.83□□□□□ -0.19
SFXN3-204ENST00000466982 ADGRL2O95490 1459 aa13.83□□□□□ -0.19
SFXN3-204ENST00000466982 ZSCAN30Q86W11 494 aa13.83□□□□□ -0.2
SFXN3-204ENST00000466982 HSCBQ8IWL3 235 aa13.83□□□□□ -0.2
SFXN3-204ENST00000466982 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
SFXN3-204ENST00000466982 ISY1Q9ULR0 285 aaKnown RBP13.83□□□□□ -0.2
SFXN3-204ENST00000466982 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
SFXN3-204ENST00000466982 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
SFXN3-204ENST00000466982 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
SFXN3-204ENST00000466982 LETM1O95202 739 aaPredicted RBP13.82□□□□□ -0.2
SFXN3-204ENST00000466982 DDIT3P35638 169 aa13.82□□□□□ -0.2
SFXN3-204ENST00000466982 TAF3Q5VWG9 929 aa13.82□□□□□ -0.2
SFXN3-204ENST00000466982 GPATCH8Q9UKJ3 1502 aaKnown RBP13.81□□□□□ -0.2
SFXN3-204ENST00000466982 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
SFXN3-204ENST00000466982 NASPP49321 788 aaPredicted RBP13.81□□□□□ -0.2
SFXN3-204ENST00000466982 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
SFXN3-204ENST00000466982 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
SFXN3-204ENST00000466982 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
SFXN3-204ENST00000466982 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
SFXN3-204ENST00000466982 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
SFXN3-204ENST00000466982 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
SFXN3-204ENST00000466982 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
SFXN3-204ENST00000466982 PPP1R9BQ96SB3 815 aa13.79□□□□□ -0.2
SFXN3-204ENST00000466982 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
SFXN3-204ENST00000466982 TROQ12816 1431 aaPredicted RBP13.79□□□□□ -0.2
SFXN3-204ENST00000466982 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
SFXN3-204ENST00000466982 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
SFXN3-204ENST00000466982 DNTTIP2Q5QJE6 756 aaKnown RBP13.78□□□□□ -0.2
SFXN3-204ENST00000466982 RWDD1Q9H446 243 aaPredicted RBP13.78□□□□□ -0.2
SFXN3-204ENST00000466982 CCDC144AA2RUR9 1427 aa13.78□□□□□ -0.2
SFXN3-204ENST00000466982 ZCCHC11Q5TAX3 1644 aaKnown RBP13.77□□□□□ -0.2
SFXN3-204ENST00000466982 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.77□□□□□ -0.2
SFXN3-204ENST00000466982 A2MP01023 1474 aa13.77□□□□□ -0.2
SFXN3-204ENST00000466982 PRDM15P57071 1507 aaPredicted RBP13.77□□□□□ -0.2
SFXN3-204ENST00000466982 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
SFXN3-204ENST00000466982 RAB3GAP1Q15042 981 aa13.77□□□□□ -0.21
SFXN3-204ENST00000466982 CCDC94Q9BW85 323 aaPredicted RBP13.77□□□□□ -0.21
SFXN3-204ENST00000466982 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
SFXN3-204ENST00000466982 UQCRHP07919 91 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
SFXN3-204ENST00000466982 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 NCOA3Q9Y6Q9 1424 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
SFXN3-204ENST00000466982 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
SFXN3-204ENST00000466982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
SFXN3-204ENST00000466982 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.75□□□□□ -0.21
SFXN3-204ENST00000466982 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
SFXN3-204ENST00000466982 SSFA2P28290 1259 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 MMP14P50281 582 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 HNRNPMP52272 730 aaKnown RBP eCLIP13.74□□□□□ -0.21
SFXN3-204ENST00000466982 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 PIK3C2GO75747 1445 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 TSPY4P0CV99 314 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 TSPY10P0CW01 314 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 SKOR2Q2VWA4 1001 aaPredicted RBP13.74□□□□□ -0.21
SFXN3-204ENST00000466982 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
SFXN3-204ENST00000466982 ZBTB22O15209 634 aa13.73□□□□□ -0.21
SFXN3-204ENST00000466982 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
SFXN3-204ENST00000466982 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
SFXN3-204ENST00000466982 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
SFXN3-204ENST00000466982 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
SFXN3-204ENST00000466982 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
SFXN3-204ENST00000466982 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
SFXN3-204ENST00000466982 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
SFXN3-204ENST00000466982 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
SFXN3-204ENST00000466982 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
SFXN3-204ENST00000466982 DYNC1I1O14576 645 aa13.71□□□□□ -0.22
SFXN3-204ENST00000466982 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 SLC20A2Q08357 652 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 MVPQ14764 893 aaKnown RBP13.7□□□□□ -0.22
SFXN3-204ENST00000466982 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 SNX21Q969T3 373 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
SFXN3-204ENST00000466982 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms